RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CABP2Q9NPB3 220 aa21.71■■□□□ 1.07
ARHGEF28-203ENST00000426542 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.06
ARHGEF28-203ENST00000426542 UBTFL1P0CB47 393 aaPredicted RBP21.7■■□□□ 1.06
ARHGEF28-203ENST00000426542 FANCD2Q9BXW9 1451 aa21.7■■□□□ 1.06
ARHGEF28-203ENST00000426542 ATF3P18847 181 aa21.69■■□□□ 1.06
ARHGEF28-203ENST00000426542 KLHL34Q8N239 644 aa21.69■■□□□ 1.06
ARHGEF28-203ENST00000426542 NLRP2Q9NX02 1062 aa21.69■■□□□ 1.06
ARHGEF28-203ENST00000426542 CNKSR2Q8WXI2 1034 aa21.69■■□□□ 1.06
ARHGEF28-203ENST00000426542 MIA2Q96PC5 1412 aa21.68■■□□□ 1.06
ARHGEF28-203ENST00000426542 KDM4AO75164 1064 aa21.68■■□□□ 1.06
ARHGEF28-203ENST00000426542 NINLQ9Y2I6 1382 aa21.67■■□□□ 1.06
ARHGEF28-203ENST00000426542 MYOM3Q5VTT5 1437 aa21.67■■□□□ 1.06
ARHGEF28-203ENST00000426542 CDC45O75419 566 aa21.67■■□□□ 1.06
ARHGEF28-203ENST00000426542 MTMR7Q9Y216 660 aa21.67■■□□□ 1.06
ARHGEF28-203ENST00000426542 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
ARHGEF28-203ENST00000426542 TEX35Q5T0J7 233 aa21.66■■□□□ 1.06
ARHGEF28-203ENST00000426542 KIF7Q2M1P5 1343 aa21.66■■□□□ 1.06
ARHGEF28-203ENST00000426542 BRMS1Q9HCU9 246 aa21.66■■□□□ 1.06
ARHGEF28-203ENST00000426542 CCDC7Q96M83 1385 aa21.65■■□□□ 1.06
ARHGEF28-203ENST00000426542 FANCIQ9NVI1 1328 aa21.65■■□□□ 1.06
ARHGEF28-203ENST00000426542 FAM13BQ9NYF5 915 aa21.65■■□□□ 1.06
ARHGEF28-203ENST00000426542 CT47A1Q5JQC4 288 aaPredicted RBP21.64■■□□□ 1.06
ARHGEF28-203ENST00000426542 CNTROBQ8N137 903 aa21.64■■□□□ 1.05
ARHGEF28-203ENST00000426542 PRDM2Q13029 1718 aa21.64■■□□□ 1.05
ARHGEF28-203ENST00000426542 OLFM4Q6UX06 510 aa21.64■■□□□ 1.05
ARHGEF28-203ENST00000426542 RUFY1Q96T51 708 aa21.63■■□□□ 1.05
ARHGEF28-203ENST00000426542 FSD1Q9BTV5 496 aa21.63■■□□□ 1.05
ARHGEF28-203ENST00000426542 TMEM132EQ6IEE7 984 aa21.62■■□□□ 1.05
ARHGEF28-203ENST00000426542 PSMA5P28066 241 aa21.62■■□□□ 1.05
ARHGEF28-203ENST00000426542 FAM69CQ0P6D2 419 aa21.62■■□□□ 1.05
ARHGEF28-203ENST00000426542 MNS1Q8NEH6 495 aa21.62■■□□□ 1.05
ARHGEF28-203ENST00000426542 EPS15P42566 896 aa21.62■■□□□ 1.05
ARHGEF28-203ENST00000426542 OSCARQ8IYS5 282 aa21.62■■□□□ 1.05
ARHGEF28-203ENST00000426542 BCL11BQ9C0K0 894 aaPredicted RBP21.62■■□□□ 1.05
ARHGEF28-203ENST00000426542 PDILTQ8N807 584 aa21.61■■□□□ 1.05
ARHGEF28-203ENST00000426542 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.61■■□□□ 1.05
ARHGEF28-203ENST00000426542 ZNF644Q9H582 1327 aaPredicted RBP21.61■■□□□ 1.05
ARHGEF28-203ENST00000426542 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.61■■□□□ 1.05
ARHGEF28-203ENST00000426542 XBP1P17861 261 aa21.61■■□□□ 1.05
ARHGEF28-203ENST00000426542 NLRP6P59044 892 aa21.61■■□□□ 1.05
ARHGEF28-203ENST00000426542 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
ARHGEF28-203ENST00000426542 ODF2Q5BJF6 829 aa21.6■■□□□ 1.05
ARHGEF28-203ENST00000426542 AK7Q96M32 723 aa21.6■■□□□ 1.05
ARHGEF28-203ENST00000426542 NAT10Q9H0A0 1025 aaKnown RBP21.6■■□□□ 1.05
ARHGEF28-203ENST00000426542 VSIG10Q8N0Z9 540 aa21.59■■□□□ 1.05
ARHGEF28-203ENST00000426542 DNAJC2Q99543 621 aaKnown RBP21.59■■□□□ 1.05
ARHGEF28-203ENST00000426542 FAM177BA6PVY3 158 aa21.59■■□□□ 1.05
ARHGEF28-203ENST00000426542 CNTLNQ9NXG0 1405 aa21.59■■□□□ 1.05
ARHGEF28-203ENST00000426542 KRI1Q8N9T8 703 aaKnown RBP21.58■■□□□ 1.05
ARHGEF28-203ENST00000426542 IKQ13123 557 aaPredicted RBP21.58■■□□□ 1.05
ARHGEF28-203ENST00000426542 AAMPQ13685 434 aa21.58■■□□□ 1.05
ARHGEF28-203ENST00000426542 CCDC30Q5VVM6 783 aa21.58■■□□□ 1.05
ARHGEF28-203ENST00000426542 CUX1P39880 1505 aa21.58■■□□□ 1.04
ARHGEF28-203ENST00000426542 MTHFSP49914 203 aa21.57■■□□□ 1.04
ARHGEF28-203ENST00000426542 FAM43AQ8N2R8 423 aa21.57■■□□□ 1.04
ARHGEF28-203ENST00000426542 SDF4Q9BRK5 362 aa21.57■■□□□ 1.04
ARHGEF28-203ENST00000426542 ADAMTS8Q9UP79 889 aa21.57■■□□□ 1.04
ARHGEF28-203ENST00000426542 ARGLU1Q9NWB6 273 aaPredicted RBP21.57■■□□□ 1.04
ARHGEF28-203ENST00000426542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.57■■□□□ 1.04
ARHGEF28-203ENST00000426542 TBC1D2BQ9UPU7 963 aa21.57■■□□□ 1.04
ARHGEF28-203ENST00000426542 SURF6O75683 361 aaKnown RBP21.56■■□□□ 1.04
ARHGEF28-203ENST00000426542 CLASRPQ8N2M8 674 aaKnown RBP21.56■■□□□ 1.04
ARHGEF28-203ENST00000426542 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
ARHGEF28-203ENST00000426542 OFD1O75665 1012 aa21.56■■□□□ 1.04
ARHGEF28-203ENST00000426542 CDR1P51861 262 aa21.55■■□□□ 1.04
ARHGEF28-203ENST00000426542 R3HCC1Q9Y3T6 440 aaKnown RBP21.55■■□□□ 1.04
ARHGEF28-203ENST00000426542 SART3Q15020 963 aaKnown RBP21.55■■□□□ 1.04
ARHGEF28-203ENST00000426542 ZFYVE27Q5T4F4 411 aa21.55■■□□□ 1.04
ARHGEF28-203ENST00000426542 GAPVD1Q14C86 1478 aa21.55■■□□□ 1.04
ARHGEF28-203ENST00000426542 STAC3Q96MF2 364 aa21.54■■□□□ 1.04
ARHGEF28-203ENST00000426542 KIF6Q6ZMV9 814 aa21.54■■□□□ 1.04
ARHGEF28-203ENST00000426542 ACBD3Q9H3P7 528 aa21.54■■□□□ 1.04
ARHGEF28-203ENST00000426542 GNAI3P08754 354 aa21.54■■□□□ 1.04
ARHGEF28-203ENST00000426542 ABTB2Q8N961 1025 aa21.54■■□□□ 1.04
ARHGEF28-203ENST00000426542 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
ARHGEF28-203ENST00000426542 HSP90AB2PQ58FF8 381 aa21.53■■□□□ 1.04
ARHGEF28-203ENST00000426542 TTLL5Q6EMB2 1281 aa21.53■■□□□ 1.04
ARHGEF28-203ENST00000426542 RNF214Q8ND24 703 aa21.53■■□□□ 1.04
ARHGEF28-203ENST00000426542 GAS2L2Q8NHY3 880 aa21.53■■□□□ 1.04
ARHGEF28-203ENST00000426542 CCDC39Q9UFE4 941 aa21.53■■□□□ 1.04
ARHGEF28-203ENST00000426542 CAGE1Q8TC20 777 aa21.53■■□□□ 1.04
ARHGEF28-203ENST00000426542 NFKBIBQ15653 356 aa21.52■■□□□ 1.04
ARHGEF28-203ENST00000426542 TCP11L2Q8N4U5 519 aa21.52■■□□□ 1.04
ARHGEF28-203ENST00000426542 RBM42Q9BTD8 480 aaKnown RBP21.52■■□□□ 1.04
ARHGEF28-203ENST00000426542 NASPP49321 788 aaPredicted RBP21.52■■□□□ 1.04
ARHGEF28-203ENST00000426542 ATP2B1P20020 1258 aa21.52■■□□□ 1.03
ARHGEF28-203ENST00000426542 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
ARHGEF28-203ENST00000426542 GPRASP1Q5JY77 1395 aa21.51■■□□□ 1.03
ARHGEF28-203ENST00000426542 RRP12Q5JTH9 1297 aaKnown RBP21.51■■□□□ 1.03
ARHGEF28-203ENST00000426542 BRD4O60885 1362 aaPredicted RBP21.51■■□□□ 1.03
ARHGEF28-203ENST00000426542 ESCO1Q5FWF5 840 aa21.5■■□□□ 1.03
ARHGEF28-203ENST00000426542 PRKAR2BP31323 418 aa21.5■■□□□ 1.03
ARHGEF28-203ENST00000426542 PLEKHO1Q53GL0 409 aaPredicted RBP21.5■■□□□ 1.03
ARHGEF28-203ENST00000426542 ANKRD50Q9ULJ7 1429 aa21.5■■□□□ 1.03
ARHGEF28-203ENST00000426542 EXOSC9Q06265 439 aaKnown RBP21.49■■□□□ 1.03
ARHGEF28-203ENST00000426542 SMC2O95347 1197 aa21.49■■□□□ 1.03
ARHGEF28-203ENST00000426542 HSP90B2PQ58FF3 399 aa21.49■■□□□ 1.03
ARHGEF28-203ENST00000426542 TTC39AQ5SRH9 613 aa21.49■■□□□ 1.03
ARHGEF28-203ENST00000426542 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
ARHGEF28-203ENST00000426542 CCDC173Q0VFZ6 552 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms