RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 MYO3AQ8NEV4 1616 aa9.69□□□□□ -0.86
LSM8-204ENST00000424702 PRKRIP1Q9H875 184 aaPredicted RBP9.69□□□□□ -0.86
LSM8-204ENST00000424702 RALBP1Q15311 655 aa9.69□□□□□ -0.86
LSM8-204ENST00000424702 CDK19Q9BWU1 502 aa9.69□□□□□ -0.86
LSM8-204ENST00000424702 NUDCQ9Y266 331 aa9.69□□□□□ -0.86
LSM8-204ENST00000424702 ZBTB7CA1YPR0 619 aa9.69□□□□□ -0.86
LSM8-204ENST00000424702 LMTK3Q96Q04 1460 aa9.68□□□□□ -0.86
LSM8-204ENST00000424702 ESCO1Q5FWF5 840 aa9.68□□□□□ -0.86
LSM8-204ENST00000424702 MORC1Q86VD1 984 aa9.68□□□□□ -0.86
LSM8-204ENST00000424702 CCDC61Q9Y6R9 512 aa9.68□□□□□ -0.86
LSM8-204ENST00000424702 PIK3C2GO75747 1445 aa9.68□□□□□ -0.86
LSM8-204ENST00000424702 NUTM2FA1L443 756 aa9.68□□□□□ -0.86
LSM8-204ENST00000424702 WASLO00401 505 aaPredicted RBP9.68□□□□□ -0.86
LSM8-204ENST00000424702 PANK3Q9H999 370 aa9.68□□□□□ -0.86
LSM8-204ENST00000424702 GTF3C3Q9Y5Q9 886 aa9.68□□□□□ -0.86
LSM8-204ENST00000424702 WDR43Q15061 677 aaKnown RBP eCLIP9.67□□□□□ -0.86
LSM8-204ENST00000424702 SLIT1O75093 1534 aa9.67□□□□□ -0.86
LSM8-204ENST00000424702 COG3Q96JB2 828 aa9.67□□□□□ -0.86
LSM8-204ENST00000424702 FAM135BQ49AJ0 1406 aa9.67□□□□□ -0.86
LSM8-204ENST00000424702 UBAP1LF5GYI3 381 aa9.66□□□□□ -0.86
LSM8-204ENST00000424702 PNNQ9H307 717 aaKnown RBP9.66□□□□□ -0.86
LSM8-204ENST00000424702 NUDT16Q96DE0 195 aaKnown RBP9.66□□□□□ -0.86
LSM8-204ENST00000424702 PHF8Q9UPP1 1060 aa9.66□□□□□ -0.86
LSM8-204ENST00000424702 ARHGAP23Q9P227 1491 aa9.66□□□□□ -0.86
LSM8-204ENST00000424702 CABP2Q9NPB3 220 aa9.66□□□□□ -0.86
LSM8-204ENST00000424702 WAPLQ7Z5K2 1190 aa9.65□□□□□ -0.86
LSM8-204ENST00000424702 NPHP3Q7Z494 1330 aa9.65□□□□□ -0.87
LSM8-204ENST00000424702 KDM5AP29375 1690 aaKnown RBP9.65□□□□□ -0.87
LSM8-204ENST00000424702 NEXMIFQ5QGS0 1516 aa9.65□□□□□ -0.87
LSM8-204ENST00000424702 TMEM131LA2VDJ0 1609 aa9.64□□□□□ -0.87
LSM8-204ENST00000424702 SBNO2Q9Y2G9 1366 aa9.63□□□□□ -0.87
LSM8-204ENST00000424702 NLRP13Q86W25 1043 aa9.63□□□□□ -0.87
LSM8-204ENST00000424702 NKTRP30414 1462 aaKnown RBP9.63□□□□□ -0.87
LSM8-204ENST00000424702 PLEKHG5O94827 1062 aa9.63□□□□□ -0.87
LSM8-204ENST00000424702 MEX3CQ5U5Q3 659 aaKnown RBP9.63□□□□□ -0.87
LSM8-204ENST00000424702 SETBP1Q9Y6X0 1596 aa9.63□□□□□ -0.87
LSM8-204ENST00000424702 MYBBP1AQ9BQG0 1328 aaKnown RBP9.63□□□□□ -0.87
LSM8-204ENST00000424702 TMEM94Q12767 1356 aa9.63□□□□□ -0.87
LSM8-204ENST00000424702 ALKQ9UM73 1620 aa9.62□□□□□ -0.87
LSM8-204ENST00000424702 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
LSM8-204ENST00000424702 PTCH1Q13635 1447 aa9.62□□□□□ -0.87
LSM8-204ENST00000424702 NCOA3Q9Y6Q9 1424 aa9.62□□□□□ -0.87
LSM8-204ENST00000424702 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
LSM8-204ENST00000424702 METP08581 1390 aa9.61□□□□□ -0.87
LSM8-204ENST00000424702 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
LSM8-204ENST00000424702 AMPHP49418 695 aa9.61□□□□□ -0.87
LSM8-204ENST00000424702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.61□□□□□ -0.87
LSM8-204ENST00000424702 BRD4O60885 1362 aaPredicted RBP9.61□□□□□ -0.87
LSM8-204ENST00000424702 CPS1P31327 1500 aa9.6□□□□□ -0.87
LSM8-204ENST00000424702 DLC1Q96QB1 1528 aa9.6□□□□□ -0.87
LSM8-204ENST00000424702 UBR1Q8IWV7 1749 aa9.6□□□□□ -0.87
LSM8-204ENST00000424702 KIAA1210Q9ULL0 1709 aa9.6□□□□□ -0.87
LSM8-204ENST00000424702 DISP3Q9P2K9 1392 aa9.6□□□□□ -0.87
LSM8-204ENST00000424702 ZNF142P52746 1687 aaPredicted RBP9.6□□□□□ -0.87
LSM8-204ENST00000424702 TTC21AQ8NDW8 1320 aa9.6□□□□□ -0.87
LSM8-204ENST00000424702 TESK2Q96S53 571 aa9.6□□□□□ -0.87
LSM8-204ENST00000424702 ADGRL3Q9HAR2 1447 aa9.6□□□□□ -0.87
LSM8-204ENST00000424702 CABP1Q9NZU7 370 aa9.59□□□□□ -0.87
LSM8-204ENST00000424702 PMFBP1Q8TBY8 1022 aa9.59□□□□□ -0.87
LSM8-204ENST00000424702 SALL2Q9Y467 1007 aaPredicted RBP9.59□□□□□ -0.87
LSM8-204ENST00000424702 NSD2O96028 1365 aa9.59□□□□□ -0.87
LSM8-204ENST00000424702 NLRP6P59044 892 aa9.59□□□□□ -0.87
LSM8-204ENST00000424702 ABTB2Q8N961 1025 aa9.59□□□□□ -0.87
LSM8-204ENST00000424702 KCNH5Q8NCM2 988 aa9.59□□□□□ -0.87
LSM8-204ENST00000424702 ANKARQ7Z5J8 1434 aa9.59□□□□□ -0.87
LSM8-204ENST00000424702 ZNF335Q9H4Z2 1342 aaPredicted RBP9.59□□□□□ -0.87
LSM8-204ENST00000424702 MAPK8IP3Q9UPT6 1336 aa9.59□□□□□ -0.87
LSM8-204ENST00000424702 TNNT2P45379 298 aaPredicted RBP9.59□□□□□ -0.87
LSM8-204ENST00000424702 MED14O60244 1454 aa9.58□□□□□ -0.88
LSM8-204ENST00000424702 ADAMTS13Q76LX8 1427 aa9.58□□□□□ -0.88
LSM8-204ENST00000424702 TRPM1Q7Z4N2 1603 aa9.58□□□□□ -0.88
LSM8-204ENST00000424702 NRXN1Q9ULB1 1477 aa9.58□□□□□ -0.88
LSM8-204ENST00000424702 PPLO60437 1756 aa9.58□□□□□ -0.88
LSM8-204ENST00000424702 SOX12O15370 315 aa9.58□□□□□ -0.88
LSM8-204ENST00000424702 KRT28Q7Z3Y7 464 aa9.58□□□□□ -0.88
LSM8-204ENST00000424702 KCNA4P22459 653 aa9.57□□□□□ -0.88
LSM8-204ENST00000424702 IQGAP1P46940 1657 aa9.57□□□□□ -0.88
LSM8-204ENST00000424702 PPIP5K1Q6PFW1 1433 aa9.57□□□□□ -0.88
LSM8-204ENST00000424702 A0A0G2JS52 829 aa9.56□□□□□ -0.88
LSM8-204ENST00000424702 MYT1Q01538 1121 aa9.56□□□□□ -0.88
LSM8-204ENST00000424702 CCDC9Q9Y3X0 531 aaKnown RBP9.56□□□□□ -0.88
LSM8-204ENST00000424702 EVA1CP58658 441 aa9.56□□□□□ -0.88
LSM8-204ENST00000424702 SLAIN2Q9P270 581 aa9.56□□□□□ -0.88
LSM8-204ENST00000424702 TECPR2O15040 1411 aa9.56□□□□□ -0.88
LSM8-204ENST00000424702 ROBO2Q9HCK4 1378 aa9.56□□□□□ -0.88
LSM8-204ENST00000424702 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
LSM8-204ENST00000424702 LRRC59Q96AG4 307 aaKnown RBP9.56□□□□□ -0.88
LSM8-204ENST00000424702 ARHGEF10O15013 1369 aa9.56□□□□□ -0.88
LSM8-204ENST00000424702 ANKRD36BQ8N2N9 1353 aa9.56□□□□□ -0.88
LSM8-204ENST00000424702 CERKQ8TCT0 537 aa9.55□□□□□ -0.88
LSM8-204ENST00000424702 SLC12A5Q9H2X9 1139 aa9.55□□□□□ -0.88
LSM8-204ENST00000424702 SIGLEC1Q9BZZ2 1709 aa9.55□□□□□ -0.88
LSM8-204ENST00000424702 DCCP43146 1447 aa9.55□□□□□ -0.88
LSM8-204ENST00000424702 FOXO3O43524 673 aa9.54□□□□□ -0.88
LSM8-204ENST00000424702 ACEP12821 1306 aa9.54□□□□□ -0.88
LSM8-204ENST00000424702 U2SURPO15042 1029 aaKnown RBP9.54□□□□□ -0.88
LSM8-204ENST00000424702 RBM33Q96EV2 1170 aaKnown RBP9.54□□□□□ -0.88
LSM8-204ENST00000424702 NSD3Q9BZ95 1437 aa9.54□□□□□ -0.88
LSM8-204ENST00000424702 SENP3-EIF4A1A0A087X0R7 540 aa9.53□□□□□ -0.88
LSM8-204ENST00000424702 PLEKHG3A1L390 1219 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms