RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 PLEKHH1Q9ULM0 1364 aa27.18■■□□□ 1.94
NUP50-207ENST00000424634 YTHDC2Q9H6S0 1430 aaKnown RBP27.17■■□□□ 1.94
NUP50-207ENST00000424634 KNDC1Q76NI1 1749 aa27.17■■□□□ 1.94
NUP50-207ENST00000424634 LRRC59Q96AG4 307 aaKnown RBP27.17■■□□□ 1.94
NUP50-207ENST00000424634 LAMC1P11047 1609 aa27.15■■□□□ 1.94
NUP50-207ENST00000424634 NUTM2BA6NNL0 878 aaPredicted RBP27.14■■□□□ 1.94
NUP50-207ENST00000424634 NUTM2EB1AL46 878 aaPredicted RBP27.14■■□□□ 1.94
NUP50-207ENST00000424634 NUTM2AQ8IVF1 878 aaPredicted RBP27.14■■□□□ 1.94
NUP50-207ENST00000424634 CDC42BPGQ6DT37 1551 aa27.14■■□□□ 1.93
NUP50-207ENST00000424634 MEX3CQ5U5Q3 659 aaKnown RBP27.12■■□□□ 1.93
NUP50-207ENST00000424634 SIRT1Q96EB6 747 aa27.12■■□□□ 1.93
NUP50-207ENST00000424634 SOS2Q07890 1332 aaPredicted RBP27.11■■□□□ 1.93
NUP50-207ENST00000424634 DHX57Q6P158 1386 aaKnown RBP27.09■■□□□ 1.93
NUP50-207ENST00000424634 PNPLA6Q8IY17 1366 aa27.09■■□□□ 1.93
NUP50-207ENST00000424634 ESCO1Q5FWF5 840 aa27.09■■□□□ 1.93
NUP50-207ENST00000424634 KDM2AQ9Y2K7 1162 aa27.09■■□□□ 1.93
NUP50-207ENST00000424634 NUTM2FA1L443 756 aa27.08■■□□□ 1.93
NUP50-207ENST00000424634 DCAF11Q8TEB1 546 aa27.08■■□□□ 1.93
NUP50-207ENST00000424634 FMN2Q9NZ56 1722 aa27.03■■□□□ 1.92
NUP50-207ENST00000424634 ADGRB1O14514 1584 aa27.02■■□□□ 1.92
NUP50-207ENST00000424634 FOXO3O43524 673 aa27.02■■□□□ 1.92
NUP50-207ENST00000424634 ZNF772Q68DY9 489 aaPredicted RBP27.02■■□□□ 1.92
NUP50-207ENST00000424634 PRAM1Q96QH2 718 aa27.02■■□□□ 1.92
NUP50-207ENST00000424634 SAFB2Q14151 953 aaKnown RBP eCLIP27.01■■□□□ 1.91
NUP50-207ENST00000424634 NPHP3Q7Z494 1330 aa27■■□□□ 1.91
NUP50-207ENST00000424634 XPCQ01831 940 aaPredicted RBP26.99■■□□□ 1.91
NUP50-207ENST00000424634 STAC3Q96MF2 364 aa26.99■■□□□ 1.91
NUP50-207ENST00000424634 PXDNQ92626 1479 aa26.99■■□□□ 1.91
NUP50-207ENST00000424634 AFF2P51816 1311 aa26.98■■□□□ 1.91
NUP50-207ENST00000424634 DLC1Q96QB1 1528 aa26.98■■□□□ 1.91
NUP50-207ENST00000424634 RGPD8O14715 1765 aaPredicted RBP26.98■■□□□ 1.91
NUP50-207ENST00000424634 TRAK1Q9UPV9 953 aa26.97■■□□□ 1.91
NUP50-207ENST00000424634 C8orf37Q96NL8 207 aa26.96■■□□□ 1.91
NUP50-207ENST00000424634 POGKQ9P215 609 aa26.96■■□□□ 1.91
NUP50-207ENST00000424634 ADAMTS2O95450 1211 aa26.95■■□□□ 1.9
NUP50-207ENST00000424634 COL22A1Q8NFW1 1626 aaPredicted RBP26.93■■□□□ 1.9
NUP50-207ENST00000424634 KIF1AQ12756 1690 aa26.89■■□□□ 1.9
NUP50-207ENST00000424634 RXRBP28702 533 aa26.89■■□□□ 1.9
NUP50-207ENST00000424634 NGLY1Q96IV0 654 aa26.89■■□□□ 1.9
NUP50-207ENST00000424634 PHF8Q9UPP1 1060 aa26.89■■□□□ 1.9
NUP50-207ENST00000424634 KRT28Q7Z3Y7 464 aa26.88■■□□□ 1.89
NUP50-207ENST00000424634 HIRIP3Q9BW71 556 aaPredicted RBP26.88■■□□□ 1.89
NUP50-207ENST00000424634 QTRT2Q9H974 415 aaKnown RBP26.87■■□□□ 1.89
NUP50-207ENST00000424634 USP32Q8NFA0 1604 aa26.87■■□□□ 1.89
NUP50-207ENST00000424634 ADGRB2O60241 1585 aa26.86■■□□□ 1.89
NUP50-207ENST00000424634 MINK1Q8N4C8 1332 aaPredicted RBP26.86■■□□□ 1.89
NUP50-207ENST00000424634 SPATA31A3Q5VYP0 1347 aa26.85■■□□□ 1.89
NUP50-207ENST00000424634 FNBP4Q8N3X1 1017 aaPredicted RBP26.82■■□□□ 1.88
NUP50-207ENST00000424634 ANKARQ7Z5J8 1434 aa26.82■■□□□ 1.88
NUP50-207ENST00000424634 PMFBP1Q8TBY8 1022 aa26.81■■□□□ 1.88
NUP50-207ENST00000424634 PRR36Q9H6K5 1346 aa26.81■■□□□ 1.88
NUP50-207ENST00000424634 ARHGEF28Q8N1W1 1705 aaKnown RBP26.81■■□□□ 1.88
NUP50-207ENST00000424634 WASLO00401 505 aaPredicted RBP26.8■■□□□ 1.88
NUP50-207ENST00000424634 RBM6P78332 1123 aaKnown RBP26.79■■□□□ 1.88
NUP50-207ENST00000424634 NBPF1Q3BBV0 1214 aa26.79■■□□□ 1.88
NUP50-207ENST00000424634 USP21Q9UK80 565 aa26.79■■□□□ 1.88
NUP50-207ENST00000424634 CDK12Q9NYV4 1490 aaPredicted RBP26.79■■□□□ 1.88
NUP50-207ENST00000424634 KIAA1210Q9ULL0 1709 aa26.79■■□□□ 1.88
NUP50-207ENST00000424634 MARF1Q9Y4F3 1742 aaKnown RBP26.79■■□□□ 1.88
NUP50-207ENST00000424634 PSME1Q06323 249 aa26.78■■□□□ 1.88
NUP50-207ENST00000424634 SIN3AQ96ST3 1273 aa26.77■■□□□ 1.88
NUP50-207ENST00000424634 TULP4Q9NRJ4 1543 aa26.75■■□□□ 1.87
NUP50-207ENST00000424634 TNS3Q68CZ2 1445 aa26.74■■□□□ 1.87
NUP50-207ENST00000424634 SBNO1A3KN83 1393 aa26.74■■□□□ 1.87
NUP50-207ENST00000424634 L3MBTL2Q969R5 705 aa26.74■■□□□ 1.87
NUP50-207ENST00000424634 BCL9LQ86UU0 1499 aa26.73■■□□□ 1.87
NUP50-207ENST00000424634 RGS12O14924 1447 aa26.73■■□□□ 1.87
NUP50-207ENST00000424634 CABLES1Q8TDN4 633 aa26.72■■□□□ 1.87
NUP50-207ENST00000424634 TRPC5Q9UL62 973 aaPredicted RBP26.72■■□□□ 1.87
NUP50-207ENST00000424634 EIF3AQ14152 1382 aaKnown RBP26.71■■□□□ 1.87
NUP50-207ENST00000424634 UPF1Q92900 1129 aaKnown RBP eCLIP26.71■■□□□ 1.87
NUP50-207ENST00000424634 ATRNO75882 1429 aa26.71■■□□□ 1.87
NUP50-207ENST00000424634 PLEKHG5O94827 1062 aa26.69■■□□□ 1.86
NUP50-207ENST00000424634 LMOD2Q6P5Q4 547 aa26.69■■□□□ 1.86
NUP50-207ENST00000424634 TRPM3Q9HCF6 1732 aaPredicted RBP26.68■■□□□ 1.86
NUP50-207ENST00000424634 NEUROD1Q13562 356 aa26.68■■□□□ 1.86
NUP50-207ENST00000424634 NUDT16Q96DE0 195 aaKnown RBP26.68■■□□□ 1.86
NUP50-207ENST00000424634 CDK19Q9BWU1 502 aa26.68■■□□□ 1.86
NUP50-207ENST00000424634 ARHGEF10O15013 1369 aa26.66■■□□□ 1.86
NUP50-207ENST00000424634 ATP7BP35670 1465 aa26.66■■□□□ 1.86
NUP50-207ENST00000424634 SLIT2O94813 1529 aa26.65■■□□□ 1.86
NUP50-207ENST00000424634 GPRASP1Q5JY77 1395 aa26.64■■□□□ 1.86
NUP50-207ENST00000424634 NGDNQ8NEJ9 315 aaKnown RBP26.64■■□□□ 1.86
NUP50-207ENST00000424634 ABCA3Q99758 1704 aa26.64■■□□□ 1.85
NUP50-207ENST00000424634 ALS2Q96Q42 1657 aa26.63■■□□□ 1.85
NUP50-207ENST00000424634 HAP1P54257 671 aaPredicted RBP26.62■■□□□ 1.85
NUP50-207ENST00000424634 UNC5CLQ8IV45 518 aa26.62■■□□□ 1.85
NUP50-207ENST00000424634 ITSN1Q15811 1721 aa26.61■■□□□ 1.85
NUP50-207ENST00000424634 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.6■■□□□ 1.85
NUP50-207ENST00000424634 GJD4Q96KN9 370 aaPredicted RBP26.6■■□□□ 1.85
NUP50-207ENST00000424634 FAM83GA6ND36 823 aa26.58■■□□□ 1.85
NUP50-207ENST00000424634 CENPJQ9HC77 1338 aaPredicted RBP26.58■■□□□ 1.85
NUP50-207ENST00000424634 PAK3O75914 559 aaPredicted RBP26.57■■□□□ 1.84
NUP50-207ENST00000424634 CCDC61Q9Y6R9 512 aa26.57■■□□□ 1.84
NUP50-207ENST00000424634 TRPM1Q7Z4N2 1603 aa26.57■■□□□ 1.84
NUP50-207ENST00000424634 TOPAZ1Q8N9V7 1692 aa26.56■■□□□ 1.84
NUP50-207ENST00000424634 PLEKHG3A1L390 1219 aa26.55■■□□□ 1.84
NUP50-207ENST00000424634 ACEP12821 1306 aa26.55■■□□□ 1.84
NUP50-207ENST00000424634 PLCH1Q4KWH8 1693 aa26.54■■□□□ 1.84
NUP50-207ENST00000424634 POLR3AO14802 1390 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms