RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CFAP70Q5T0N1 1121 aa19.55■□□□□ 0.72
C9orf3-204ENST00000424143 AFAP1Q8N556 730 aa19.55■□□□□ 0.72
C9orf3-204ENST00000424143 NSD2O96028 1365 aa19.55■□□□□ 0.72
C9orf3-204ENST00000424143 RPGRIP1LQ68CZ1 1315 aa19.54■□□□□ 0.72
C9orf3-204ENST00000424143 ADGRF5Q8IZF2 1346 aa19.53■□□□□ 0.72
C9orf3-204ENST00000424143 SLC4A3P48751 1232 aa19.53■□□□□ 0.72
C9orf3-204ENST00000424143 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
C9orf3-204ENST00000424143 MROH2AA6NES4 1674 aa19.52■□□□□ 0.72
C9orf3-204ENST00000424143 ZNF518AQ6AHZ1 1483 aa19.51■□□□□ 0.71
C9orf3-204ENST00000424143 PPRC1Q5VV67 1664 aaKnown RBP19.51■□□□□ 0.71
C9orf3-204ENST00000424143 PPLO60437 1756 aa19.51■□□□□ 0.71
C9orf3-204ENST00000424143 ADGRB1O14514 1584 aa19.51■□□□□ 0.71
C9orf3-204ENST00000424143 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
C9orf3-204ENST00000424143 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
C9orf3-204ENST00000424143 QRICH2Q9H0J4 1663 aa19.49■□□□□ 0.71
C9orf3-204ENST00000424143 ADGRB2O60241 1585 aa19.49■□□□□ 0.71
C9orf3-204ENST00000424143 KIF3BO15066 747 aa19.49■□□□□ 0.71
C9orf3-204ENST00000424143 FRAT2O75474 233 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-204ENST00000424143 NSD3Q9BZ95 1437 aa19.49■□□□□ 0.71
C9orf3-204ENST00000424143 MORC1Q86VD1 984 aa19.48■□□□□ 0.71
C9orf3-204ENST00000424143 CFAP53Q96M91 514 aa19.47■□□□□ 0.71
C9orf3-204ENST00000424143 RWDD1Q9H446 243 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-204ENST00000424143 KIDINS220Q9ULH0 1771 aa19.47■□□□□ 0.71
C9orf3-204ENST00000424143 CANXP27824 592 aaKnown RBP19.47■□□□□ 0.71
C9orf3-204ENST00000424143 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
C9orf3-204ENST00000424143 UPF2Q9HAU5 1272 aaKnown RBP19.47■□□□□ 0.71
C9orf3-204ENST00000424143 PANK1Q8TE04 598 aa19.46■□□□□ 0.71
C9orf3-204ENST00000424143 TBC1D32Q96NH3 1257 aa19.46■□□□□ 0.71
C9orf3-204ENST00000424143 COG6Q9Y2V7 657 aa19.46■□□□□ 0.71
C9orf3-204ENST00000424143 UGGT1Q9NYU2 1555 aa19.46■□□□□ 0.7
C9orf3-204ENST00000424143 FAM43AQ8N2R8 423 aa19.45■□□□□ 0.7
C9orf3-204ENST00000424143 TCP11L2Q8N4U5 519 aa19.45■□□□□ 0.7
C9orf3-204ENST00000424143 ANTXR1Q9H6X2 564 aa19.45■□□□□ 0.7
C9orf3-204ENST00000424143 NOS1P29475 1434 aa19.44■□□□□ 0.7
C9orf3-204ENST00000424143 BRPF3Q9ULD4 1205 aa19.43■□□□□ 0.7
C9orf3-204ENST00000424143 L1TD1Q5T7N2 865 aaKnown RBP19.42■□□□□ 0.7
C9orf3-204ENST00000424143 PCDHB15Q9Y5E8 787 aa19.41■□□□□ 0.7
C9orf3-204ENST00000424143 ANKRD36BQ8N2N9 1353 aa19.41■□□□□ 0.7
C9orf3-204ENST00000424143 IL16Q14005 1332 aa19.4■□□□□ 0.7
C9orf3-204ENST00000424143 PDZRN3Q9UPQ7 1066 aa19.4■□□□□ 0.7
C9orf3-204ENST00000424143 CFAP74Q9C0B2 1584 aa19.4■□□□□ 0.7
C9orf3-204ENST00000424143 SEC24BO95487 1268 aa19.4■□□□□ 0.7
C9orf3-204ENST00000424143 ABCC11Q96J66 1382 aa19.39■□□□□ 0.69
C9orf3-204ENST00000424143 HDAC1Q13547 482 aaPredicted RBP19.39■□□□□ 0.69
C9orf3-204ENST00000424143 MVPQ14764 893 aaKnown RBP19.39■□□□□ 0.69
C9orf3-204ENST00000424143 MED14O60244 1454 aa19.38■□□□□ 0.69
C9orf3-204ENST00000424143 MLH3Q9UHC1 1453 aa19.38■□□□□ 0.69
C9orf3-204ENST00000424143 PIK3C2BO00750 1634 aa19.37■□□□□ 0.69
C9orf3-204ENST00000424143 ZKSCAN2Q63HK3 967 aa19.37■□□□□ 0.69
C9orf3-204ENST00000424143 ANO8Q9HCE9 1232 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-204ENST00000424143 ZFYVE9O95405 1425 aa19.37■□□□□ 0.69
C9orf3-204ENST00000424143 HECW2Q9P2P5 1572 aa19.37■□□□□ 0.69
C9orf3-204ENST00000424143 MTHFSP49914 203 aa19.36■□□□□ 0.69
C9orf3-204ENST00000424143 EVC2Q86UK5 1308 aa19.36■□□□□ 0.69
C9orf3-204ENST00000424143 RLBP1P12271 317 aa19.36■□□□□ 0.69
C9orf3-204ENST00000424143 NPATQ14207 1427 aa19.35■□□□□ 0.69
C9orf3-204ENST00000424143 ARHGEF28Q8N1W1 1705 aaKnown RBP19.35■□□□□ 0.69
C9orf3-204ENST00000424143 SLC12A5Q9H2X9 1139 aa19.35■□□□□ 0.69
C9orf3-204ENST00000424143 GLI2P10070 1586 aa19.35■□□□□ 0.69
C9orf3-204ENST00000424143 DZIP1LQ8IYY4 767 aaKnown RBP19.33■□□□□ 0.69
C9orf3-204ENST00000424143 TBC1D2Q9BYX2 928 aa19.33■□□□□ 0.69
C9orf3-204ENST00000424143 TULP4Q9NRJ4 1543 aa19.33■□□□□ 0.69
C9orf3-204ENST00000424143 ANKRD26Q9UPS8 1709 aa19.32■□□□□ 0.68
C9orf3-204ENST00000424143 RSPH6AQ9H0K4 717 aa19.32■□□□□ 0.68
C9orf3-204ENST00000424143 RTN4Q9NQC3 1192 aaKnown RBP19.32■□□□□ 0.68
C9orf3-204ENST00000424143 DDX19BQ9UMR2 479 aa19.32■□□□□ 0.68
C9orf3-204ENST00000424143 COL3A1P02461 1466 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-204ENST00000424143 CAMSAP1Q5T5Y3 1602 aa19.31■□□□□ 0.68
C9orf3-204ENST00000424143 ABCC3O15438 1527 aa19.31■□□□□ 0.68
C9orf3-204ENST00000424143 FRMPD1Q5SYB0 1578 aa19.3■□□□□ 0.68
C9orf3-204ENST00000424143 SMC5Q8IY18 1101 aa19.3■□□□□ 0.68
C9orf3-204ENST00000424143 ARHGAP31Q2M1Z3 1444 aa19.3■□□□□ 0.68
C9orf3-204ENST00000424143 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
C9orf3-204ENST00000424143 ZNF428Q96B54 188 aa19.29■□□□□ 0.68
C9orf3-204ENST00000424143 PNNQ9H307 717 aaKnown RBP19.29■□□□□ 0.68
C9orf3-204ENST00000424143 ISY1Q9ULR0 285 aaKnown RBP19.29■□□□□ 0.68
C9orf3-204ENST00000424143 TRAK1Q9UPV9 953 aa19.29■□□□□ 0.68
C9orf3-204ENST00000424143 NEXMIFQ5QGS0 1516 aa19.29■□□□□ 0.68
C9orf3-204ENST00000424143 VGFO15240 615 aaPredicted RBP19.29■□□□□ 0.68
C9orf3-204ENST00000424143 PLEKHF1Q96S99 279 aa19.29■□□□□ 0.68
C9orf3-204ENST00000424143 CHMP5Q9NZZ3 219 aa19.29■□□□□ 0.68
C9orf3-204ENST00000424143 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
C9orf3-204ENST00000424143 POGZQ7Z3K3 1410 aa19.28■□□□□ 0.68
C9orf3-204ENST00000424143 FSD2A1L4K1 749 aa19.28■□□□□ 0.68
C9orf3-204ENST00000424143 RRP7AQ9Y3A4 280 aaKnown RBP19.28■□□□□ 0.68
C9orf3-204ENST00000424143 CLTCQ00610 1675 aaKnown RBP19.27■□□□□ 0.68
C9orf3-204ENST00000424143 POGKQ9P215 609 aa19.27■□□□□ 0.68
C9orf3-204ENST00000424143 CDC42BPGQ6DT37 1551 aa19.26■□□□□ 0.67
C9orf3-204ENST00000424143 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
C9orf3-204ENST00000424143 MCM4P33991 863 aa19.25■□□□□ 0.67
C9orf3-204ENST00000424143 FTSJ3Q8IY81 847 aaKnown RBP19.25■□□□□ 0.67
C9orf3-204ENST00000424143 SNX21Q969T3 373 aa19.25■□□□□ 0.67
C9orf3-204ENST00000424143 C22orf23Q9BZE7 217 aa19.25■□□□□ 0.67
C9orf3-204ENST00000424143 IPO8O15397 1037 aaKnown RBP19.25■□□□□ 0.67
C9orf3-204ENST00000424143 U2AF1L5P0DN76 240 aaPredicted RBP19.25■□□□□ 0.67
C9orf3-204ENST00000424143 U2AF1Q01081 240 aaKnown RBP eCLIP19.25■□□□□ 0.67
C9orf3-204ENST00000424143 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
C9orf3-204ENST00000424143 ALDH1L2Q3SY69 923 aa19.25■□□□□ 0.67
C9orf3-204ENST00000424143 ATF7IPQ6VMQ6 1270 aa19.25■□□□□ 0.67
C9orf3-204ENST00000424143 PNPLA6Q8IY17 1366 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms