RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 ZNF428Q96B54 188 aa18.91■□□□□ 0.62
SHISA9-201ENST00000423335 STK31Q9BXU1 1019 aa18.9■□□□□ 0.62
SHISA9-201ENST00000423335 MAGI3Q5TCQ9 1506 aa18.9■□□□□ 0.62
SHISA9-201ENST00000423335 AMOTL2Q9Y2J4 779 aa18.9■□□□□ 0.62
SHISA9-201ENST00000423335 ABCC2Q92887 1545 aa18.9■□□□□ 0.62
SHISA9-201ENST00000423335 FOXO3O43524 673 aa18.89■□□□□ 0.61
SHISA9-201ENST00000423335 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.61
SHISA9-201ENST00000423335 TEFQ10587 303 aa18.89■□□□□ 0.61
SHISA9-201ENST00000423335 KDM5BQ9UGL1 1544 aa18.88■□□□□ 0.61
SHISA9-201ENST00000423335 CFAP65Q6ZU64 1925 aaKnown RBP18.88■□□□□ 0.61
SHISA9-201ENST00000423335 ARID3AQ99856 593 aa18.88■□□□□ 0.61
SHISA9-201ENST00000423335 HSPA2P54652 639 aa18.88■□□□□ 0.61
SHISA9-201ENST00000423335 PRKAR2BP31323 418 aa18.88■□□□□ 0.61
SHISA9-201ENST00000423335 POGZQ7Z3K3 1410 aa18.88■□□□□ 0.61
SHISA9-201ENST00000423335 ZC3H6P61129 1189 aaKnown RBP18.87■□□□□ 0.61
SHISA9-201ENST00000423335 RTEL1-TNFRSF6BF6WH68 1400 aa18.87■□□□□ 0.61
SHISA9-201ENST00000423335 CALD1Q05682 793 aaKnown RBP18.87■□□□□ 0.61
SHISA9-201ENST00000423335 RPRD2Q5VT52 1461 aaKnown RBP18.87■□□□□ 0.61
SHISA9-201ENST00000423335 CCDC61Q9Y6R9 512 aa18.87■□□□□ 0.61
SHISA9-201ENST00000423335 RPGRIP1LQ68CZ1 1315 aa18.86■□□□□ 0.61
SHISA9-201ENST00000423335 A2MP01023 1474 aa18.85■□□□□ 0.61
SHISA9-201ENST00000423335 STRN4Q9NRL3 753 aa18.84■□□□□ 0.61
SHISA9-201ENST00000423335 SULT6B1Q6IMI4 303 aa18.84■□□□□ 0.61
SHISA9-201ENST00000423335 RUNDC1Q96C34 613 aa18.84■□□□□ 0.61
SHISA9-201ENST00000423335 PIP4K2BP78356 416 aa18.84■□□□□ 0.61
SHISA9-201ENST00000423335 ZKSCAN2Q63HK3 967 aa18.84■□□□□ 0.61
SHISA9-201ENST00000423335 GBP4Q96PP9 640 aa18.84■□□□□ 0.61
SHISA9-201ENST00000423335 CHMP3Q9Y3E7 222 aa18.84■□□□□ 0.61
SHISA9-201ENST00000423335 NME9Q86XW9 330 aa18.84■□□□□ 0.61
SHISA9-201ENST00000423335 CHMP4BQ9H444 224 aaKnown RBP18.84■□□□□ 0.61
SHISA9-201ENST00000423335 C1orf141Q5JVX7 400 aa18.83■□□□□ 0.61
SHISA9-201ENST00000423335 ANKRD45Q5TZF3 282 aa18.83■□□□□ 0.6
SHISA9-201ENST00000423335 TSR2Q969E8 191 aaKnown RBP18.83■□□□□ 0.6
SHISA9-201ENST00000423335 FOXD4L5Q5VV16 416 aaPredicted RBP18.82■□□□□ 0.6
SHISA9-201ENST00000423335 FOXD4L4Q8WXT5 416 aaPredicted RBP18.82■□□□□ 0.6
SHISA9-201ENST00000423335 ERCC6L2Q5T890 1561 aa18.82■□□□□ 0.6
SHISA9-201ENST00000423335 NOL8Q76FK4 1167 aaKnown RBP18.82■□□□□ 0.6
SHISA9-201ENST00000423335 NUTM2BA6NNL0 878 aaPredicted RBP18.81■□□□□ 0.6
SHISA9-201ENST00000423335 NUTM2EB1AL46 878 aaPredicted RBP18.81■□□□□ 0.6
SHISA9-201ENST00000423335 MSNP26038 577 aaKnown RBP18.81■□□□□ 0.6
SHISA9-201ENST00000423335 NUTM2AQ8IVF1 878 aaPredicted RBP18.81■□□□□ 0.6
SHISA9-201ENST00000423335 LMOD3Q0VAK6 560 aa18.8■□□□□ 0.6
SHISA9-201ENST00000423335 C14orf93Q9H972 538 aaKnown RBP18.8■□□□□ 0.6
SHISA9-201ENST00000423335 NCKAP5LQ9HCH0 1330 aa18.8■□□□□ 0.6
SHISA9-201ENST00000423335 THUMPD2Q9BTF0 503 aaKnown RBP18.79■□□□□ 0.6
SHISA9-201ENST00000423335 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
SHISA9-201ENST00000423335 DZIP1LQ8IYY4 767 aaKnown RBP18.78■□□□□ 0.6
SHISA9-201ENST00000423335 RAPGEF4Q8WZA2 1011 aa18.78■□□□□ 0.6
SHISA9-201ENST00000423335 ZNF518AQ6AHZ1 1483 aa18.78■□□□□ 0.6
SHISA9-201ENST00000423335 DISP3Q9P2K9 1392 aa18.78■□□□□ 0.6
SHISA9-201ENST00000423335 GPRASP1Q5JY77 1395 aa18.78■□□□□ 0.6
SHISA9-201ENST00000423335 NSD3Q9BZ95 1437 aa18.77■□□□□ 0.6
SHISA9-201ENST00000423335 EMILIN1Q9Y6C2 1016 aa18.77■□□□□ 0.59
SHISA9-201ENST00000423335 FOXD4L6Q3SYB3 417 aaPredicted RBP18.76■□□□□ 0.59
SHISA9-201ENST00000423335 FOXD4L3Q6VB84 417 aaPredicted RBP18.76■□□□□ 0.59
SHISA9-201ENST00000423335 TSPYL4Q9UJ04 414 aa18.76■□□□□ 0.59
SHISA9-201ENST00000423335 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
SHISA9-201ENST00000423335 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
SHISA9-201ENST00000423335 WASLO00401 505 aaPredicted RBP18.73■□□□□ 0.59
SHISA9-201ENST00000423335 AIMP1Q12904 312 aaKnown RBP18.73■□□□□ 0.59
SHISA9-201ENST00000423335 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
SHISA9-201ENST00000423335 KCNJ4P48050 445 aa18.72■□□□□ 0.59
SHISA9-201ENST00000423335 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
SHISA9-201ENST00000423335 EXOSC9Q06265 439 aaKnown RBP18.72■□□□□ 0.59
SHISA9-201ENST00000423335 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
SHISA9-201ENST00000423335 C22orf23Q9BZE7 217 aa18.72■□□□□ 0.59
SHISA9-201ENST00000423335 TNRQ92752 1358 aa18.72■□□□□ 0.59
SHISA9-201ENST00000423335 TCOF1Q13428 1488 aaKnown RBP18.72■□□□□ 0.59
SHISA9-201ENST00000423335 ZRANB1Q9UGI0 708 aa18.71■□□□□ 0.59
SHISA9-201ENST00000423335 FAM135AQ9P2D6 1515 aa18.71■□□□□ 0.59
SHISA9-201ENST00000423335 FKBP5Q13451 457 aaPredicted RBP18.71■□□□□ 0.59
SHISA9-201ENST00000423335 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
SHISA9-201ENST00000423335 DDX49Q9Y6V7 483 aaKnown RBP18.71■□□□□ 0.59
SHISA9-201ENST00000423335 CFAP43Q8NDM7 1665 aa18.7■□□□□ 0.58
SHISA9-201ENST00000423335 DDX54Q8TDD1 881 aaKnown RBP18.7■□□□□ 0.58
SHISA9-201ENST00000423335 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
SHISA9-201ENST00000423335 PRDM11Q9NQV5 511 aa18.7■□□□□ 0.58
SHISA9-201ENST00000423335 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
SHISA9-201ENST00000423335 DUOX2Q9NRD8 1548 aa18.68■□□□□ 0.58
SHISA9-201ENST00000423335 ZMYM3Q14202 1370 aa18.68■□□□□ 0.58
SHISA9-201ENST00000423335 KAT6BQ8WYB5 2073 aa18.68■□□□□ 0.58
SHISA9-201ENST00000423335 TRIM6-TRIM34B2RNG4 842 aa18.68■□□□□ 0.58
SHISA9-201ENST00000423335 PRKCSHP14314 528 aaPredicted RBP18.68■□□□□ 0.58
SHISA9-201ENST00000423335 DDX19BQ9UMR2 479 aa18.68■□□□□ 0.58
SHISA9-201ENST00000423335 CHMP5Q9NZZ3 219 aa18.68■□□□□ 0.58
SHISA9-201ENST00000423335 NAP1L2Q9ULW6 460 aaPredicted RBP18.67■□□□□ 0.58
SHISA9-201ENST00000423335 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
SHISA9-201ENST00000423335 ATAD2Q6PL18 1390 aa18.67■□□□□ 0.58
SHISA9-201ENST00000423335 PZPP20742 1482 aa18.67■□□□□ 0.58
SHISA9-201ENST00000423335 PHF8Q9UPP1 1060 aa18.66■□□□□ 0.58
SHISA9-201ENST00000423335 ITSN2Q9NZM3 1697 aa18.66■□□□□ 0.58
SHISA9-201ENST00000423335 GTF2E1P29083 439 aaPredicted RBP18.66■□□□□ 0.58
SHISA9-201ENST00000423335 MEX3CQ5U5Q3 659 aaKnown RBP18.66■□□□□ 0.58
SHISA9-201ENST00000423335 TOM1L2Q6ZVM7 507 aa18.65■□□□□ 0.58
SHISA9-201ENST00000423335 TESK2Q96S53 571 aa18.65■□□□□ 0.58
SHISA9-201ENST00000423335 CHD1O14646 1710 aa18.65■□□□□ 0.58
SHISA9-201ENST00000423335 DDX11L8A8MPP1 907 aa18.65■□□□□ 0.58
SHISA9-201ENST00000423335 SLFN5Q08AF3 891 aa18.65■□□□□ 0.58
SHISA9-201ENST00000423335 TEX14Q8IWB6 1497 aa18.64■□□□□ 0.57
SHISA9-201ENST00000423335 MCCP23508 829 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms