RNA–Protein interactions for RNA: ENST00000422806.1

NKX1-1-201, Transcript of NK1 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX1-1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1-201ENST00000422806 KDM2AQ9Y2K7 1162 aa42.07■■■■■ 4.33
NKX1-1-201ENST00000422806 PNPLA6Q8IY17 1366 aa42.06■■■■■ 4.32
NKX1-1-201ENST00000422806 ABCC11Q96J66 1382 aa42.04■■■■■ 4.32
NKX1-1-201ENST00000422806 WAPLQ7Z5K2 1190 aa42.04■■■■■ 4.32
NKX1-1-201ENST00000422806 DCAF11Q8TEB1 546 aa42.04■■■■■ 4.32
NKX1-1-201ENST00000422806 DDX17Q92841 729 aaKnown RBP42.04■■■■■ 4.32
NKX1-1-201ENST00000422806 LAMC1P11047 1609 aa42.04■■■■■ 4.32
NKX1-1-201ENST00000422806 NRXN1Q9ULB1 1477 aa42.03■■■■■ 4.32
NKX1-1-201ENST00000422806 RXRBP28702 533 aa42.01■■■■■ 4.32
NKX1-1-201ENST00000422806 YTHDC2Q9H6S0 1430 aaKnown RBP42.01■■■■■ 4.32
NKX1-1-201ENST00000422806 DHX57Q6P158 1386 aaKnown RBP42.01■■■■■ 4.31
NKX1-1-201ENST00000422806 AFF2P51816 1311 aa42■■■■■ 4.31
NKX1-1-201ENST00000422806 TECPR2O15040 1411 aa42■■■■■ 4.31
NKX1-1-201ENST00000422806 CDK12Q9NYV4 1490 aaPredicted RBP41.99■■■■■ 4.31
NKX1-1-201ENST00000422806 STAC3Q96MF2 364 aa41.96■■■■■ 4.31
NKX1-1-201ENST00000422806 SOS2Q07890 1332 aaPredicted RBP41.95■■■■■ 4.31
NKX1-1-201ENST00000422806 ORAI2Q96SN7 254 aa41.93■■■■■ 4.3
NKX1-1-201ENST00000422806 SIRT1Q96EB6 747 aa41.92■■■■■ 4.3
NKX1-1-201ENST00000422806 CDC42BPGQ6DT37 1551 aa41.92■■■■■ 4.3
NKX1-1-201ENST00000422806 KNDC1Q76NI1 1749 aa41.92■■■■■ 4.3
NKX1-1-201ENST00000422806 PLEKHH1Q9ULM0 1364 aa41.91■■■■■ 4.3
NKX1-1-201ENST00000422806 C8orf37Q96NL8 207 aa41.91■■■■■ 4.3
NKX1-1-201ENST00000422806 UPF1Q92900 1129 aaKnown RBP eCLIP41.86■■■■■ 4.29
NKX1-1-201ENST00000422806 ESCO1Q5FWF5 840 aa41.85■■■■■ 4.29
NKX1-1-201ENST00000422806 NUTM2FA1L443 756 aa41.84■■■■■ 4.29
NKX1-1-201ENST00000422806 PRAM1Q96QH2 718 aa41.82■■■■■ 4.29
NKX1-1-201ENST00000422806 POGKQ9P215 609 aa41.82■■■■■ 4.29
NKX1-1-201ENST00000422806 SAFB2Q14151 953 aaKnown RBP eCLIP41.81■■■■■ 4.28
NKX1-1-201ENST00000422806 NPHP3Q7Z494 1330 aa41.8■■■■■ 4.28
NKX1-1-201ENST00000422806 RBM6P78332 1123 aaKnown RBP41.8■■■■■ 4.28
NKX1-1-201ENST00000422806 ADAMTS2O95450 1211 aa41.79■■■■■ 4.28
NKX1-1-201ENST00000422806 QTRT2Q9H974 415 aaKnown RBP41.79■■■■■ 4.28
NKX1-1-201ENST00000422806 NGLY1Q96IV0 654 aa41.78■■■■■ 4.28
NKX1-1-201ENST00000422806 TRAK1Q9UPV9 953 aa41.78■■■■■ 4.28
NKX1-1-201ENST00000422806 COL22A1Q8NFW1 1626 aaPredicted RBP41.75■■■■■ 4.27
NKX1-1-201ENST00000422806 RGS12O14924 1447 aa41.74■■■■■ 4.27
NKX1-1-201ENST00000422806 ADGRB1O14514 1584 aa41.71■■■■■ 4.27
NKX1-1-201ENST00000422806 PXDNQ92626 1479 aa41.7■■■■■ 4.27
NKX1-1-201ENST00000422806 DLC1Q96QB1 1528 aa41.69■■■■■ 4.27
NKX1-1-201ENST00000422806 FOXO3O43524 673 aa41.68■■■■■ 4.26
NKX1-1-201ENST00000422806 FNBP4Q8N3X1 1017 aaPredicted RBP41.65■■■■■ 4.26
NKX1-1-201ENST00000422806 USP21Q9UK80 565 aa41.65■■■■■ 4.26
NKX1-1-201ENST00000422806 FMN2Q9NZ56 1722 aa41.64■■■■■ 4.26
NKX1-1-201ENST00000422806 TRPC5Q9UL62 973 aaPredicted RBP41.63■■■■■ 4.25
NKX1-1-201ENST00000422806 TRIM26Q12899 539 aaPredicted RBP41.62■■■■■ 4.25
NKX1-1-201ENST00000422806 XPCQ01831 940 aaPredicted RBP41.61■■■■■ 4.25
NKX1-1-201ENST00000422806 SIN3AQ96ST3 1273 aa41.61■■■■■ 4.25
NKX1-1-201ENST00000422806 NEUROD1Q13562 356 aa41.59■■■■■ 4.25
NKX1-1-201ENST00000422806 HIRIP3Q9BW71 556 aaPredicted RBP41.59■■■■■ 4.25
NKX1-1-201ENST00000422806 MINK1Q8N4C8 1332 aaPredicted RBP41.58■■■■■ 4.25
NKX1-1-201ENST00000422806 KIF1AQ12756 1690 aa41.55■■■■■ 4.24
NKX1-1-201ENST00000422806 ATRNO75882 1429 aa41.55■■■■■ 4.24
NKX1-1-201ENST00000422806 PHF8Q9UPP1 1060 aa41.55■■■■■ 4.24
NKX1-1-201ENST00000422806 L3MBTL2Q969R5 705 aa41.53■■■■■ 4.24
NKX1-1-201ENST00000422806 RGPD8O14715 1765 aaPredicted RBP41.5■■■■■ 4.23
NKX1-1-201ENST00000422806 NBPF1Q3BBV0 1214 aa41.49■■■■■ 4.23
NKX1-1-201ENST00000422806 KRT28Q7Z3Y7 464 aa41.49■■■■■ 4.23
NKX1-1-201ENST00000422806 ATAD2Q6PL18 1390 aa41.49■■■■■ 4.23
NKX1-1-201ENST00000422806 KIAA1210Q9ULL0 1709 aa41.47■■■■■ 4.23
NKX1-1-201ENST00000422806 MARF1Q9Y4F3 1742 aaKnown RBP41.47■■■■■ 4.23
NKX1-1-201ENST00000422806 SPATA31A3Q5VYP0 1347 aa41.46■■■■■ 4.23
NKX1-1-201ENST00000422806 WASLO00401 505 aaPredicted RBP41.46■■■■■ 4.23
NKX1-1-201ENST00000422806 BCL9LQ86UU0 1499 aa41.46■■■■■ 4.23
NKX1-1-201ENST00000422806 ADGRB2O60241 1585 aa41.45■■■■■ 4.23
NKX1-1-201ENST00000422806 PSME1Q06323 249 aa41.44■■■■■ 4.22
NKX1-1-201ENST00000422806 EIF3AQ14152 1382 aaKnown RBP41.44■■■■■ 4.22
NKX1-1-201ENST00000422806 ANKARQ7Z5J8 1434 aa41.44■■■■■ 4.22
NKX1-1-201ENST00000422806 PMFBP1Q8TBY8 1022 aa41.43■■■■■ 4.22
NKX1-1-201ENST00000422806 ARHGEF28Q8N1W1 1705 aaKnown RBP41.41■■■■■ 4.22
NKX1-1-201ENST00000422806 TNS3Q68CZ2 1445 aa41.36■■■■■ 4.21
NKX1-1-201ENST00000422806 USP32Q8NFA0 1604 aa41.34■■■■■ 4.21
NKX1-1-201ENST00000422806 TNKS1BP1Q9C0C2 1729 aaKnown RBP41.34■■■■■ 4.21
NKX1-1-201ENST00000422806 GJD4Q96KN9 370 aaPredicted RBP41.33■■■■■ 4.21
NKX1-1-201ENST00000422806 PRR36Q9H6K5 1346 aa41.33■■■■■ 4.21
NKX1-1-201ENST00000422806 SLIT2O94813 1529 aa41.33■■■■■ 4.21
NKX1-1-201ENST00000422806 LMOD2Q6P5Q4 547 aa41.32■■■■■ 4.21
NKX1-1-201ENST00000422806 TULP4Q9NRJ4 1543 aa41.32■■■■■ 4.2
NKX1-1-201ENST00000422806 SBNO1A3KN83 1393 aa41.31■■■■■ 4.2
NKX1-1-201ENST00000422806 UNC5CLQ8IV45 518 aa41.3■■■■■ 4.2
NKX1-1-201ENST00000422806 CDK19Q9BWU1 502 aa41.3■■■■■ 4.2
NKX1-1-201ENST00000422806 NGDNQ8NEJ9 315 aaKnown RBP41.28■■■■■ 4.2
NKX1-1-201ENST00000422806 NUDT16Q96DE0 195 aaKnown RBP41.28■■■■■ 4.2
NKX1-1-201ENST00000422806 GPRASP1Q5JY77 1395 aa41.26■■■■■ 4.2
NKX1-1-201ENST00000422806 ARHGEF10O15013 1369 aa41.25■■■■■ 4.19
NKX1-1-201ENST00000422806 CENPJQ9HC77 1338 aaPredicted RBP41.25■■■■■ 4.19
NKX1-1-201ENST00000422806 HAP1P54257 671 aaPredicted RBP41.25■■■■■ 4.19
NKX1-1-201ENST00000422806 PLEKHG5O94827 1062 aa41.24■■■■■ 4.19
NKX1-1-201ENST00000422806 RALGAPBQ86X10 1494 aa41.21■■■■■ 4.19
NKX1-1-201ENST00000422806 EP400Q96L91 3159 aa41.21■■■■■ 4.19
NKX1-1-201ENST00000422806 CCDC125Q86Z20 511 aa41.19■■■■■ 4.18
NKX1-1-201ENST00000422806 ROCK2O75116 1388 aaKnown RBP41.19■■■■■ 4.18
NKX1-1-201ENST00000422806 GLI3P10071 1580 aa41.18■■■■■ 4.18
NKX1-1-201ENST00000422806 TONSLQ96HA7 1378 aa41.17■■■■■ 4.18
NKX1-1-201ENST00000422806 CABLES1Q8TDN4 633 aa41.17■■■■■ 4.18
NKX1-1-201ENST00000422806 CCDC61Q9Y6R9 512 aa41.16■■■■■ 4.18
NKX1-1-201ENST00000422806 TRPM1Q7Z4N2 1603 aa41.15■■■■■ 4.18
NKX1-1-201ENST00000422806 SRPK2P78362 688 aaKnown RBP41.15■■■■■ 4.18
NKX1-1-201ENST00000422806 ATP7BP35670 1465 aa41.15■■■■■ 4.18
NKX1-1-201ENST00000422806 PAK3O75914 559 aaPredicted RBP41.14■■■■■ 4.18
NKX1-1-201ENST00000422806 NBPF8Q3BBV2 869 aa41.13■■■■■ 4.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms