RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 NUTM2EB1AL46 878 aaPredicted RBP31.09■■■□□ 2.57
CPNE1-211ENST00000420363 NUTM2AQ8IVF1 878 aaPredicted RBP31.09■■■□□ 2.57
CPNE1-211ENST00000420363 DCAF11Q8TEB1 546 aa31.09■■■□□ 2.57
CPNE1-211ENST00000420363 MST1RQ04912 1400 aa31.08■■■□□ 2.57
CPNE1-211ENST00000420363 CDC42BPGQ6DT37 1551 aa31.06■■■□□ 2.56
CPNE1-211ENST00000420363 CFAP70Q5T0N1 1121 aa31.06■■■□□ 2.56
CPNE1-211ENST00000420363 LRRC59Q96AG4 307 aaKnown RBP31.05■■■□□ 2.56
CPNE1-211ENST00000420363 KIAA1210Q9ULL0 1709 aa31.04■■■□□ 2.56
CPNE1-211ENST00000420363 DLC1Q96QB1 1528 aa31.04■■■□□ 2.56
CPNE1-211ENST00000420363 SHPRHQ149N8 1683 aa31.04■■■□□ 2.56
CPNE1-211ENST00000420363 TMEM132EQ6IEE7 984 aa31.04■■■□□ 2.56
CPNE1-211ENST00000420363 SIRT1Q96EB6 747 aa31.01■■■□□ 2.55
CPNE1-211ENST00000420363 KDM2AQ9Y2K7 1162 aa31■■■□□ 2.55
CPNE1-211ENST00000420363 DDX17Q92841 729 aaKnown RBP30.99■■■□□ 2.55
CPNE1-211ENST00000420363 STK26Q9P289 416 aa30.99■■■□□ 2.55
CPNE1-211ENST00000420363 NHSL1Q5SYE7 1610 aa30.96■■■□□ 2.55
CPNE1-211ENST00000420363 RXRBP28702 533 aa30.96■■■□□ 2.55
CPNE1-211ENST00000420363 PLEKHH1Q9ULM0 1364 aa30.94■■■□□ 2.54
CPNE1-211ENST00000420363 C1orf167Q5SNV9 1468 aa30.94■■■□□ 2.54
CPNE1-211ENST00000420363 AFF2P51816 1311 aa30.92■■■□□ 2.54
CPNE1-211ENST00000420363 WAPLQ7Z5K2 1190 aa30.91■■■□□ 2.54
CPNE1-211ENST00000420363 ADGRB2O60241 1585 aa30.91■■■□□ 2.54
CPNE1-211ENST00000420363 FMN2Q9NZ56 1722 aa30.9■■■□□ 2.54
CPNE1-211ENST00000420363 C8orf37Q96NL8 207 aa30.89■■■□□ 2.54
CPNE1-211ENST00000420363 SIN3AQ96ST3 1273 aa30.89■■■□□ 2.54
CPNE1-211ENST00000420363 ARHGEF28Q8N1W1 1705 aaKnown RBP30.89■■■□□ 2.54
CPNE1-211ENST00000420363 ORAI2Q96SN7 254 aa30.88■■■□□ 2.53
CPNE1-211ENST00000420363 PNPLA6Q8IY17 1366 aa30.88■■■□□ 2.53
CPNE1-211ENST00000420363 L3MBTL2Q969R5 705 aa30.85■■■□□ 2.53
CPNE1-211ENST00000420363 PRAM1Q96QH2 718 aa30.84■■■□□ 2.53
CPNE1-211ENST00000420363 UPF1Q92900 1129 aaKnown RBP eCLIP30.83■■■□□ 2.53
CPNE1-211ENST00000420363 ADAMTS2O95450 1211 aa30.82■■■□□ 2.52
CPNE1-211ENST00000420363 QTRT2Q9H974 415 aaKnown RBP30.82■■■□□ 2.52
CPNE1-211ENST00000420363 TRPM1Q7Z4N2 1603 aa30.81■■■□□ 2.52
CPNE1-211ENST00000420363 SOS2Q07890 1332 aaPredicted RBP30.81■■■□□ 2.52
CPNE1-211ENST00000420363 NGLY1Q96IV0 654 aa30.81■■■□□ 2.52
CPNE1-211ENST00000420363 NEUROD1Q13562 356 aa30.8■■■□□ 2.52
CPNE1-211ENST00000420363 TRAK1Q9UPV9 953 aa30.8■■■□□ 2.52
CPNE1-211ENST00000420363 POGKQ9P215 609 aa30.78■■■□□ 2.52
CPNE1-211ENST00000420363 KIF1AQ12756 1690 aa30.78■■■□□ 2.52
CPNE1-211ENST00000420363 ESCO1Q5FWF5 840 aa30.77■■■□□ 2.52
CPNE1-211ENST00000420363 CDK12Q9NYV4 1490 aaPredicted RBP30.76■■■□□ 2.52
CPNE1-211ENST00000420363 RBM6P78332 1123 aaKnown RBP30.76■■■□□ 2.51
CPNE1-211ENST00000420363 ANKARQ7Z5J8 1434 aa30.73■■■□□ 2.51
CPNE1-211ENST00000420363 TONSLQ96HA7 1378 aa30.72■■■□□ 2.51
CPNE1-211ENST00000420363 NPHP3Q7Z494 1330 aa30.72■■■□□ 2.51
CPNE1-211ENST00000420363 EIF3AQ14152 1382 aaKnown RBP30.71■■■□□ 2.51
CPNE1-211ENST00000420363 SAFB2Q14151 953 aaKnown RBP eCLIP30.71■■■□□ 2.513e-13■□□□□ 9.1
CPNE1-211ENST00000420363 USP32Q8NFA0 1604 aa30.7■■■□□ 2.51
CPNE1-211ENST00000420363 NBPF1Q3BBV0 1214 aa30.7■■■□□ 2.51
CPNE1-211ENST00000420363 PCGF6Q9BYE7 350 aa30.69■■■□□ 2.5
CPNE1-211ENST00000420363 TULP4Q9NRJ4 1543 aa30.68■■■□□ 2.5
CPNE1-211ENST00000420363 NUTM2FA1L443 756 aa30.68■■■□□ 2.5
CPNE1-211ENST00000420363 USP21Q9UK80 565 aa30.68■■■□□ 2.5
CPNE1-211ENST00000420363 RGPD8O14715 1765 aaPredicted RBP30.68■■■□□ 2.5
CPNE1-211ENST00000420363 FOXO3O43524 673 aa30.67■■■□□ 2.5
CPNE1-211ENST00000420363 PXDNQ92626 1479 aa30.65■■■□□ 2.5
CPNE1-211ENST00000420363 CLSPNQ9HAW4 1339 aa30.65■■■□□ 2.5
CPNE1-211ENST00000420363 XPCQ01831 940 aaPredicted RBP30.64■■■□□ 2.5
CPNE1-211ENST00000420363 GPRASP1Q5JY77 1395 aa30.64■■■□□ 2.5
CPNE1-211ENST00000420363 TRPC5Q9UL62 973 aaPredicted RBP30.63■■■□□ 2.49
CPNE1-211ENST00000420363 MINK1Q8N4C8 1332 aaPredicted RBP30.63■■■□□ 2.49
CPNE1-211ENST00000420363 ROCK2O75116 1388 aaKnown RBP30.63■■■□□ 2.49
CPNE1-211ENST00000420363 RGS12O14924 1447 aa30.63■■■□□ 2.49
CPNE1-211ENST00000420363 FNBP4Q8N3X1 1017 aaPredicted RBP30.62■■■□□ 2.49
CPNE1-211ENST00000420363 QRICH2Q9H0J4 1663 aa30.62■■■□□ 2.49
CPNE1-211ENST00000420363 ITSN1Q15811 1721 aa30.61■■■□□ 2.49
CPNE1-211ENST00000420363 RALGAPBQ86X10 1494 aa30.61■■■□□ 2.49
CPNE1-211ENST00000420363 WASLO00401 505 aaPredicted RBP30.6■■■□□ 2.49
CPNE1-211ENST00000420363 COL22A1Q8NFW1 1626 aaPredicted RBP30.6■■■□□ 2.49
CPNE1-211ENST00000420363 HIRIP3Q9BW71 556 aaPredicted RBP30.6■■■□□ 2.49
CPNE1-211ENST00000420363 ATP7BP35670 1465 aa30.57■■■□□ 2.48
CPNE1-211ENST00000420363 CENPJQ9HC77 1338 aaPredicted RBP30.57■■■□□ 2.48
CPNE1-211ENST00000420363 NBPF8Q3BBV2 869 aa30.57■■■□□ 2.48
CPNE1-211ENST00000420363 PHF8Q9UPP1 1060 aa30.56■■■□□ 2.48
CPNE1-211ENST00000420363 TOPAZ1Q8N9V7 1692 aa30.55■■■□□ 2.48
CPNE1-211ENST00000420363 PRR36Q9H6K5 1346 aa30.52■■■□□ 2.48
CPNE1-211ENST00000420363 KRT28Q7Z3Y7 464 aa30.5■■■□□ 2.47
CPNE1-211ENST00000420363 ATRNO75882 1429 aa30.49■■■□□ 2.47
CPNE1-211ENST00000420363 ATAD2Q6PL18 1390 aa30.48■■■□□ 2.47
CPNE1-211ENST00000420363 SPATA31A3Q5VYP0 1347 aa30.47■■■□□ 2.47
CPNE1-211ENST00000420363 TNS3Q68CZ2 1445 aa30.47■■■□□ 2.47
CPNE1-211ENST00000420363 TIMELESSQ9UNS1 1208 aa30.46■■■□□ 2.47
CPNE1-211ENST00000420363 TRPM3Q9HCF6 1732 aaPredicted RBP30.46■■■□□ 2.47
CPNE1-211ENST00000420363 BCL9LQ86UU0 1499 aa30.45■■■□□ 2.47
CPNE1-211ENST00000420363 SBNO1A3KN83 1393 aa30.45■■■□□ 2.47
CPNE1-211ENST00000420363 PSME1Q06323 249 aa30.45■■■□□ 2.47
CPNE1-211ENST00000420363 CDK19Q9BWU1 502 aa30.45■■■□□ 2.47
CPNE1-211ENST00000420363 SBNO2Q9Y2G9 1366 aa30.43■■■□□ 2.46
CPNE1-211ENST00000420363 NUDT16Q96DE0 195 aaKnown RBP30.43■■■□□ 2.46
CPNE1-211ENST00000420363 HAP1P54257 671 aaPredicted RBP30.42■■■□□ 2.46
CPNE1-211ENST00000420363 GJD4Q96KN9 370 aaPredicted RBP30.42■■■□□ 2.46
CPNE1-211ENST00000420363 CARD11Q9BXL7 1154 aa30.42■■■□□ 2.46
CPNE1-211ENST00000420363 PMFBP1Q8TBY8 1022 aa30.41■■■□□ 2.46
CPNE1-211ENST00000420363 UNC5CLQ8IV45 518 aa30.39■■■□□ 2.46
CPNE1-211ENST00000420363 ALS2Q96Q42 1657 aa30.39■■■□□ 2.45
CPNE1-211ENST00000420363 MARF1Q9Y4F3 1742 aaKnown RBP30.39■■■□□ 2.45
CPNE1-211ENST00000420363 CCDC61Q9Y6R9 512 aa30.38■■■□□ 2.45
CPNE1-211ENST00000420363 POLR3AO14802 1390 aaPredicted RBP30.38■■■□□ 2.45
CPNE1-211ENST00000420363 ARHGEF10O15013 1369 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms