RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 XIRP1Q702N8 1843 aaKnown RBP18.06■□□□□ 0.48
ATG4B-208ENST00000419606 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-208ENST00000419606 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
ATG4B-208ENST00000419606 LRRC7Q96NW7 1537 aa18.04■□□□□ 0.48
ATG4B-208ENST00000419606 NALCNQ8IZF0 1738 aa18.03■□□□□ 0.48
ATG4B-208ENST00000419606 C11orf95C9JLR9 678 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-208ENST00000419606 TMEM94Q12767 1356 aa18.02■□□□□ 0.47
ATG4B-208ENST00000419606 TULP4Q9NRJ4 1543 aa18.01■□□□□ 0.47
ATG4B-208ENST00000419606 DISP3Q9P2K9 1392 aa18■□□□□ 0.47
ATG4B-208ENST00000419606 SBNO2Q9Y2G9 1366 aa17.98■□□□□ 0.47
ATG4B-208ENST00000419606 ADGRB2O60241 1585 aa17.97■□□□□ 0.47
ATG4B-208ENST00000419606 C14orf37Q86TY3 774 aa17.97■□□□□ 0.47
ATG4B-208ENST00000419606 ADGRL3Q9HAR2 1447 aa17.97■□□□□ 0.47
ATG4B-208ENST00000419606 CDK19Q9BWU1 502 aa17.95■□□□□ 0.46
ATG4B-208ENST00000419606 NUTM2FA1L443 756 aa17.94■□□□□ 0.46
ATG4B-208ENST00000419606 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-208ENST00000419606 TMF1P82094 1093 aa17.94■□□□□ 0.46
ATG4B-208ENST00000419606 CABP2Q9NPB3 220 aa17.94■□□□□ 0.46
ATG4B-208ENST00000419606 ZNF316A6NFI3 1004 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-208ENST00000419606 EVC2Q86UK5 1308 aa17.93■□□□□ 0.46
ATG4B-208ENST00000419606 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
ATG4B-208ENST00000419606 CDC42BPGQ6DT37 1551 aa17.92■□□□□ 0.46
ATG4B-208ENST00000419606 NCOA3Q9Y6Q9 1424 aa17.92■□□□□ 0.46
ATG4B-208ENST00000419606 USP32Q8NFA0 1604 aa17.92■□□□□ 0.46
ATG4B-208ENST00000419606 POLR3GLQ9BT43 218 aa17.92■□□□□ 0.46
ATG4B-208ENST00000419606 KIF7Q2M1P5 1343 aa17.92■□□□□ 0.46
ATG4B-208ENST00000419606 WASHC2AQ641Q2 1341 aa17.92■□□□□ 0.46
ATG4B-208ENST00000419606 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
ATG4B-208ENST00000419606 C19orf44Q9H6X5 657 aa17.91■□□□□ 0.46
ATG4B-208ENST00000419606 RGPD8O14715 1765 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-208ENST00000419606 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
ATG4B-208ENST00000419606 MSH6P52701 1360 aa17.9■□□□□ 0.46
ATG4B-208ENST00000419606 CCDC7Q96M83 1385 aa17.89■□□□□ 0.45
ATG4B-208ENST00000419606 MYOM1P52179 1685 aa17.87■□□□□ 0.45
ATG4B-208ENST00000419606 ATP7BP35670 1465 aa17.87■□□□□ 0.45
ATG4B-208ENST00000419606 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
ATG4B-208ENST00000419606 ATF3P18847 181 aa17.86■□□□□ 0.45
ATG4B-208ENST00000419606 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
ATG4B-208ENST00000419606 DCCP43146 1447 aa17.86■□□□□ 0.45
ATG4B-208ENST00000419606 MST1RQ04912 1400 aa17.85■□□□□ 0.45
ATG4B-208ENST00000419606 TOPAZ1Q8N9V7 1692 aa17.85■□□□□ 0.45
ATG4B-208ENST00000419606 CERKQ8TCT0 537 aa17.84■□□□□ 0.45
ATG4B-208ENST00000419606 CADPS2Q86UW7 1296 aa17.83■□□□□ 0.44
ATG4B-208ENST00000419606 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
ATG4B-208ENST00000419606 ANKARQ7Z5J8 1434 aa17.82■□□□□ 0.44
ATG4B-208ENST00000419606 CDCA8Q53HL2 280 aa17.82■□□□□ 0.44
ATG4B-208ENST00000419606 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
ATG4B-208ENST00000419606 PUS7Q96PZ0 661 aaKnown RBP17.82■□□□□ 0.44
ATG4B-208ENST00000419606 ORAI2Q96SN7 254 aa17.82■□□□□ 0.44
ATG4B-208ENST00000419606 SLC12A5Q9H2X9 1139 aa17.82■□□□□ 0.44
ATG4B-208ENST00000419606 CABP1Q9NZU7 370 aa17.82■□□□□ 0.44
ATG4B-208ENST00000419606 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
ATG4B-208ENST00000419606 ATAD2Q6PL18 1390 aa17.81■□□□□ 0.44
ATG4B-208ENST00000419606 ITSN1Q15811 1721 aa17.81■□□□□ 0.44
ATG4B-208ENST00000419606 PMFBP1Q8TBY8 1022 aa17.8■□□□□ 0.44
ATG4B-208ENST00000419606 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
ATG4B-208ENST00000419606 ESCO1Q5FWF5 840 aa17.79■□□□□ 0.44
ATG4B-208ENST00000419606 SLAIN2Q9P270 581 aa17.79■□□□□ 0.44
ATG4B-208ENST00000419606 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
ATG4B-208ENST00000419606 DDX10Q13206 875 aaKnown RBP17.78■□□□□ 0.44
ATG4B-208ENST00000419606 IQSEC2Q5JU85 1478 aa17.77■□□□□ 0.44
ATG4B-208ENST00000419606 PHF8Q9UPP1 1060 aa17.76■□□□□ 0.43
ATG4B-208ENST00000419606 PLEKHG3A1L390 1219 aa17.75■□□□□ 0.43
ATG4B-208ENST00000419606 BRINP3Q76B58 766 aa17.75■□□□□ 0.43
ATG4B-208ENST00000419606 DDX17Q92841 729 aaKnown RBP17.75■□□□□ 0.43
ATG4B-208ENST00000419606 AKAP12Q02952 1782 aa17.75■□□□□ 0.43
ATG4B-208ENST00000419606 ACEP12821 1306 aa17.74■□□□□ 0.43
ATG4B-208ENST00000419606 UBAP1LF5GYI3 381 aa17.74■□□□□ 0.43
ATG4B-208ENST00000419606 PANK3Q9H999 370 aa17.74■□□□□ 0.43
ATG4B-208ENST00000419606 A0A1W2PP64 1363 aa17.74■□□□□ 0.43
ATG4B-208ENST00000419606 CARD14Q9BXL6 1004 aa17.73■□□□□ 0.43
ATG4B-208ENST00000419606 ROBO1Q9Y6N7 1651 aa17.73■□□□□ 0.43
ATG4B-208ENST00000419606 CPSF1Q10570 1443 aaKnown RBP17.72■□□□□ 0.43
ATG4B-208ENST00000419606 KIF1AQ12756 1690 aa17.72■□□□□ 0.43
ATG4B-208ENST00000419606 FOXO3O43524 673 aa17.72■□□□□ 0.43
ATG4B-208ENST00000419606 PIP4K2BP78356 416 aa17.72■□□□□ 0.43
ATG4B-208ENST00000419606 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-208ENST00000419606 ANKRD36BQ8N2N9 1353 aa17.71■□□□□ 0.43
ATG4B-208ENST00000419606 NINLQ9Y2I6 1382 aa17.71■□□□□ 0.43
ATG4B-208ENST00000419606 TOM1O60784 492 aa17.71■□□□□ 0.43
ATG4B-208ENST00000419606 XPCQ01831 940 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-208ENST00000419606 NGDNQ8NEJ9 315 aaKnown RBP17.71■□□□□ 0.43
ATG4B-208ENST00000419606 MON2Q7Z3U7 1717 aa17.71■□□□□ 0.43
ATG4B-208ENST00000419606 KTN1Q86UP2 1357 aaKnown RBP17.69■□□□□ 0.42
ATG4B-208ENST00000419606 HDGFL2Q7Z4V5 671 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-208ENST00000419606 TERF2IPQ9NYB0 399 aa17.69■□□□□ 0.42
ATG4B-208ENST00000419606 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
ATG4B-208ENST00000419606 NRKQ7Z2Y5 1582 aa17.68■□□□□ 0.42
ATG4B-208ENST00000419606 USP6P35125 1406 aa17.67■□□□□ 0.42
ATG4B-208ENST00000419606 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
ATG4B-208ENST00000419606 PER1O15534 1290 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-208ENST00000419606 NHSL1Q5SYE7 1610 aa17.67■□□□□ 0.42
ATG4B-208ENST00000419606 PSME1Q06323 249 aa17.66■□□□□ 0.42
ATG4B-208ENST00000419606 SSH2Q76I76 1423 aa17.65■□□□□ 0.42
ATG4B-208ENST00000419606 TRPM3Q9HCF6 1732 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-208ENST00000419606 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
ATG4B-208ENST00000419606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.65■□□□□ 0.42
ATG4B-208ENST00000419606 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-208ENST00000419606 PXDNQ92626 1479 aa17.64■□□□□ 0.41
ATG4B-208ENST00000419606 CNGB1Q14028 1251 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms