RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
HMGN1-205ENST00000419378 MYOM3Q5VTT5 1437 aa10.83□□□□□ -0.68
HMGN1-205ENST00000419378 NUTM2FA1L443 756 aa10.82□□□□□ -0.68
HMGN1-205ENST00000419378 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
HMGN1-205ENST00000419378 PLXNC1O60486 1568 aa10.82□□□□□ -0.68
HMGN1-205ENST00000419378 ARHGEF5Q12774 1597 aa10.82□□□□□ -0.68
HMGN1-205ENST00000419378 ADGBQ8N7X0 1667 aa10.8□□□□□ -0.68
HMGN1-205ENST00000419378 GPR37O15354 613 aa10.8□□□□□ -0.68
HMGN1-205ENST00000419378 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
HMGN1-205ENST00000419378 SLAIN1Q8ND83 568 aa10.8□□□□□ -0.68
HMGN1-205ENST00000419378 MIA2Q96PC5 1412 aa10.8□□□□□ -0.68
HMGN1-205ENST00000419378 A2MP01023 1474 aa10.8□□□□□ -0.68
HMGN1-205ENST00000419378 RTEL1-TNFRSF6BF6WH68 1400 aa10.79□□□□□ -0.68
HMGN1-205ENST00000419378 KRI1Q8N9T8 703 aaKnown RBP10.79□□□□□ -0.68
HMGN1-205ENST00000419378 SCUBE2Q9NQ36 999 aa10.78□□□□□ -0.68
HMGN1-205ENST00000419378 BRPF1P55201 1214 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-205ENST00000419378 RSPH4AQ5TD94 716 aa10.77□□□□□ -0.69
HMGN1-205ENST00000419378 PTPN23Q9H3S7 1636 aa10.76□□□□□ -0.69
HMGN1-205ENST00000419378 HOXB3P14651 431 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-205ENST00000419378 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
HMGN1-205ENST00000419378 MAST1Q9Y2H9 1570 aa10.76□□□□□ -0.69
HMGN1-205ENST00000419378 FGD6Q6ZV73 1430 aa10.75□□□□□ -0.69
HMGN1-205ENST00000419378 DOK7Q18PE1 504 aa10.75□□□□□ -0.69
HMGN1-205ENST00000419378 AK7Q96M32 723 aa10.75□□□□□ -0.69
HMGN1-205ENST00000419378 TCOF1Q13428 1488 aaKnown RBP10.74□□□□□ -0.69
HMGN1-205ENST00000419378 LMTK3Q96Q04 1460 aa10.74□□□□□ -0.69
HMGN1-205ENST00000419378 CROCC2H7BZ55 1655 aa10.74□□□□□ -0.69
HMGN1-205ENST00000419378 PHF14O94880 888 aa10.74□□□□□ -0.69
HMGN1-205ENST00000419378 NEUROD2Q15784 382 aa10.74□□□□□ -0.69
HMGN1-205ENST00000419378 DHX29Q7Z478 1369 aaKnown RBP10.74□□□□□ -0.69
HMGN1-205ENST00000419378 CNTLNQ9NXG0 1405 aa10.74□□□□□ -0.69
HMGN1-205ENST00000419378 C3P01024 1663 aa10.73□□□□□ -0.69
HMGN1-205ENST00000419378 TSPY4P0CV99 314 aa10.73□□□□□ -0.69
HMGN1-205ENST00000419378 TSPY10P0CW01 314 aa10.73□□□□□ -0.69
HMGN1-205ENST00000419378 ARSIQ5FYB1 569 aa10.73□□□□□ -0.69
HMGN1-205ENST00000419378 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.691e-7■■□□□ 13.3
HMGN1-205ENST00000419378 EPAS1Q99814 870 aa10.73□□□□□ -0.69
HMGN1-205ENST00000419378 SHANK2Q9UPX8 1470 aa10.73□□□□□ -0.69
HMGN1-205ENST00000419378 DNMT1P26358 1616 aaKnown RBP10.73□□□□□ -0.69
HMGN1-205ENST00000419378 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
HMGN1-205ENST00000419378 FCHSD2O94868 740 aa10.72□□□□□ -0.69
HMGN1-205ENST00000419378 CEBPAP49715 358 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-205ENST00000419378 PCDHGA10Q9Y5H3 936 aa10.72□□□□□ -0.69
HMGN1-205ENST00000419378 ABCC5O15440 1437 aa10.71□□□□□ -0.69
HMGN1-205ENST00000419378 NUDT7P0C024 238 aa10.71□□□□□ -0.69
HMGN1-205ENST00000419378 CLTCQ00610 1675 aaKnown RBP10.71□□□□□ -0.69
HMGN1-205ENST00000419378 EN1Q05925 392 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-205ENST00000419378 PREX1Q8TCU6 1659 aa10.71□□□□□ -0.69
HMGN1-205ENST00000419378 RBM33Q96EV2 1170 aaKnown RBP10.71□□□□□ -0.69
HMGN1-205ENST00000419378 ESF1Q9H501 851 aaKnown RBP10.71□□□□□ -0.69
HMGN1-205ENST00000419378 DAPK1P53355 1430 aa10.7□□□□□ -0.7
HMGN1-205ENST00000419378 RIMBP2O15034 1052 aa10.7□□□□□ -0.7
HMGN1-205ENST00000419378 GNPATO15228 680 aa10.7□□□□□ -0.7
HMGN1-205ENST00000419378 MAP3K7O43318 606 aa10.7□□□□□ -0.7
HMGN1-205ENST00000419378 HIC1Q14526 733 aa10.7□□□□□ -0.7
HMGN1-205ENST00000419378 FECHP22830 423 aa10.69□□□□□ -0.7
HMGN1-205ENST00000419378 PTGDRQ13258 359 aa10.69□□□□□ -0.7
HMGN1-205ENST00000419378 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
HMGN1-205ENST00000419378 GGT6Q6P531 493 aa10.69□□□□□ -0.7
HMGN1-205ENST00000419378 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
HMGN1-205ENST00000419378 EIF2AK4Q9P2K8 1649 aaKnown RBP10.69□□□□□ -0.7
HMGN1-205ENST00000419378 FAM135AQ9P2D6 1515 aa10.68□□□□□ -0.7
HMGN1-205ENST00000419378 TRIM66O15016 1216 aa10.68□□□□□ -0.7
HMGN1-205ENST00000419378 MAP2K5Q13163 448 aa10.68□□□□□ -0.7
HMGN1-205ENST00000419378 GPR153Q6NV75 609 aa10.68□□□□□ -0.7
HMGN1-205ENST00000419378 ZNF710Q8N1W2 664 aa10.68□□□□□ -0.7
HMGN1-205ENST00000419378 RNF17Q9BXT8 1623 aaKnown RBP10.68□□□□□ -0.7
HMGN1-205ENST00000419378 KDM5DQ9BY66 1539 aa10.68□□□□□ -0.7
HMGN1-205ENST00000419378 DUOX2Q9NRD8 1548 aa10.68□□□□□ -0.7
HMGN1-205ENST00000419378 ZMYM3Q14202 1370 aa10.67□□□□□ -0.7
HMGN1-205ENST00000419378 MINK1Q8N4C8 1332 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-205ENST00000419378 KIF3BO15066 747 aa10.67□□□□□ -0.7
HMGN1-205ENST00000419378 FOSBP53539 338 aa10.67□□□□□ -0.7
HMGN1-205ENST00000419378 TMEM132AQ24JP5 1023 aa10.67□□□□□ -0.7
HMGN1-205ENST00000419378 ZSWIM6Q9HCJ5 1215 aa10.67□□□□□ -0.7
HMGN1-205ENST00000419378 NPATQ14207 1427 aa10.67□□□□□ -0.7
HMGN1-205ENST00000419378 UHRF1BP1Q6BDS2 1440 aa10.67□□□□□ -0.7
HMGN1-205ENST00000419378 KIF15Q9NS87 1388 aa10.66□□□□□ -0.7
HMGN1-205ENST00000419378 HSPA2P54652 639 aa10.66□□□□□ -0.7
HMGN1-205ENST00000419378 TSR1Q2NL82 804 aaKnown RBP10.66□□□□□ -0.7
HMGN1-205ENST00000419378 MROH1Q8NDA8 1641 aa10.66□□□□□ -0.7
HMGN1-205ENST00000419378 SETD1BQ9UPS6 1966 aaKnown RBP10.65□□□□□ -0.7
HMGN1-205ENST00000419378 IRF6O14896 467 aa10.65□□□□□ -0.7
HMGN1-205ENST00000419378 FAM50AQ14320 339 aaKnown RBP10.65□□□□□ -0.7
HMGN1-205ENST00000419378 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
HMGN1-205ENST00000419378 FBXW7Q969H0 707 aa10.65□□□□□ -0.7
HMGN1-205ENST00000419378 CCDC102AQ96A19 550 aa10.65□□□□□ -0.7
HMGN1-205ENST00000419378 NPDC1Q9NQX5 325 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-205ENST00000419378 ERBINQ96RT1 1412 aa10.65□□□□□ -0.7
HMGN1-205ENST00000419378 ADGRL2O95490 1459 aa10.64□□□□□ -0.71
HMGN1-205ENST00000419378 PPARGC1BQ86YN6 1023 aaKnown RBP10.64□□□□□ -0.71
HMGN1-205ENST00000419378 MYO3AQ8NEV4 1616 aa10.64□□□□□ -0.71
HMGN1-205ENST00000419378 PTPRKQ15262 1439 aa10.64□□□□□ -0.71
HMGN1-205ENST00000419378 ZC3H13Q5T200 1668 aaKnown RBP10.63□□□□□ -0.71
HMGN1-205ENST00000419378 PDE4DQ08499 809 aa10.63□□□□□ -0.71
HMGN1-205ENST00000419378 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-205ENST00000419378 RRP7BPQ9NSQ0 103 aa10.63□□□□□ -0.71
HMGN1-205ENST00000419378 ANKRD30AQ9BXX3 1397 aa10.63□□□□□ -0.71
HMGN1-205ENST00000419378 ABCC3O15438 1527 aa10.63□□□□□ -0.71
HMGN1-205ENST00000419378 PZPP20742 1482 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms