RNA–Protein interactions for RNA: ENST00000419074.5

RCC1-206, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-206ENST00000419074 C14orf37Q86TY3 774 aa18.52■□□□□ 0.56
RCC1-206ENST00000419074 XRN1Q8IZH2 1706 aaKnown RBP18.52■□□□□ 0.55
RCC1-206ENST00000419074 NCOA3Q9Y6Q9 1424 aa18.51■□□□□ 0.55
RCC1-206ENST00000419074 WASLO00401 505 aaPredicted RBP18.51■□□□□ 0.55
RCC1-206ENST00000419074 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
RCC1-206ENST00000419074 CDK19Q9BWU1 502 aa18.51■□□□□ 0.55
RCC1-206ENST00000419074 TMEM94Q12767 1356 aa18.51■□□□□ 0.55
RCC1-206ENST00000419074 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
RCC1-206ENST00000419074 CHD2O14647 1828 aaKnown RBP18.5■□□□□ 0.55
RCC1-206ENST00000419074 KNDC1Q76NI1 1749 aa18.49■□□□□ 0.55
RCC1-206ENST00000419074 DISP3Q9P2K9 1392 aa18.48■□□□□ 0.55
RCC1-206ENST00000419074 SRPK2P78362 688 aaKnown RBP18.48■□□□□ 0.55
RCC1-206ENST00000419074 KIF7Q2M1P5 1343 aa18.48■□□□□ 0.55
RCC1-206ENST00000419074 WASHC2AQ641Q2 1341 aa18.48■□□□□ 0.55
RCC1-206ENST00000419074 ARHGEF28Q8N1W1 1705 aaKnown RBP18.47■□□□□ 0.55
RCC1-206ENST00000419074 POLR3GLQ9BT43 218 aa18.47■□□□□ 0.55
RCC1-206ENST00000419074 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
RCC1-206ENST00000419074 LRRC7Q96NW7 1537 aa18.46■□□□□ 0.55
RCC1-206ENST00000419074 CCDC7Q96M83 1385 aa18.45■□□□□ 0.54
RCC1-206ENST00000419074 ADGRL3Q9HAR2 1447 aa18.45■□□□□ 0.54
RCC1-206ENST00000419074 ATF3P18847 181 aa18.43■□□□□ 0.54
RCC1-206ENST00000419074 NUDT16Q96DE0 195 aaKnown RBP18.42■□□□□ 0.54
RCC1-206ENST00000419074 MSH6P52701 1360 aa18.42■□□□□ 0.54
RCC1-206ENST00000419074 CADPS2Q86UW7 1296 aa18.41■□□□□ 0.54
RCC1-206ENST00000419074 CCDC61Q9Y6R9 512 aa18.41■□□□□ 0.54
RCC1-206ENST00000419074 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.4■□□□□ 0.54
RCC1-206ENST00000419074 TULP4Q9NRJ4 1543 aa18.4■□□□□ 0.54
RCC1-206ENST00000419074 NUTM2FA1L443 756 aa18.4■□□□□ 0.54
RCC1-206ENST00000419074 LTBP4Q8N2S1 1624 aa18.4■□□□□ 0.54
RCC1-206ENST00000419074 QRICH2Q9H0J4 1663 aa18.4■□□□□ 0.54
RCC1-206ENST00000419074 ATAD2Q6PL18 1390 aa18.4■□□□□ 0.54
RCC1-206ENST00000419074 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
RCC1-206ENST00000419074 TMC1Q8TDI8 760 aa18.39■□□□□ 0.53
RCC1-206ENST00000419074 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
RCC1-206ENST00000419074 CABP1Q9NZU7 370 aa18.38■□□□□ 0.53
RCC1-206ENST00000419074 PRR36Q9H6K5 1346 aa18.38■□□□□ 0.53
RCC1-206ENST00000419074 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
RCC1-206ENST00000419074 DCCP43146 1447 aa18.37■□□□□ 0.53
RCC1-206ENST00000419074 ADGRB2O60241 1585 aa18.37■□□□□ 0.53
RCC1-206ENST00000419074 ANKARQ7Z5J8 1434 aa18.35■□□□□ 0.53
RCC1-206ENST00000419074 PLEKHG3A1L390 1219 aa18.35■□□□□ 0.53
RCC1-206ENST00000419074 CDC42BPGQ6DT37 1551 aa18.34■□□□□ 0.53
RCC1-206ENST00000419074 NINLQ9Y2I6 1382 aa18.33■□□□□ 0.53
RCC1-206ENST00000419074 PANK3Q9H999 370 aa18.33■□□□□ 0.52
RCC1-206ENST00000419074 SLAIN2Q9P270 581 aa18.33■□□□□ 0.52
RCC1-206ENST00000419074 ESCO1Q5FWF5 840 aa18.32■□□□□ 0.52
RCC1-206ENST00000419074 CERKQ8TCT0 537 aa18.32■□□□□ 0.52
RCC1-206ENST00000419074 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
RCC1-206ENST00000419074 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
RCC1-206ENST00000419074 PHF8Q9UPP1 1060 aa18.31■□□□□ 0.52
RCC1-206ENST00000419074 PPIP5K1Q6PFW1 1433 aa18.31■□□□□ 0.52
RCC1-206ENST00000419074 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
RCC1-206ENST00000419074 PMFBP1Q8TBY8 1022 aa18.3■□□□□ 0.52
RCC1-206ENST00000419074 ZNF692Q9BU19 519 aaPredicted RBP18.3■□□□□ 0.52
RCC1-206ENST00000419074 ATP7BP35670 1465 aa18.3■□□□□ 0.52
RCC1-206ENST00000419074 C1orf167Q5SNV9 1468 aa18.3■□□□□ 0.52
RCC1-206ENST00000419074 MST1RQ04912 1400 aa18.3■□□□□ 0.52
RCC1-206ENST00000419074 NALCNQ8IZF0 1738 aa18.29■□□□□ 0.52
RCC1-206ENST00000419074 TOM1O60784 492 aa18.28■□□□□ 0.52
RCC1-206ENST00000419074 NGDNQ8NEJ9 315 aaKnown RBP18.28■□□□□ 0.52
RCC1-206ENST00000419074 ACEP12821 1306 aa18.27■□□□□ 0.52
RCC1-206ENST00000419074 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
RCC1-206ENST00000419074 ANKRD36BQ8N2N9 1353 aa18.26■□□□□ 0.51
RCC1-206ENST00000419074 PER1O15534 1290 aaPredicted RBP18.25■□□□□ 0.51
RCC1-206ENST00000419074 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
RCC1-206ENST00000419074 KNSTRNQ9Y448 316 aa18.24■□□□□ 0.51
RCC1-206ENST00000419074 POLR3AO14802 1390 aaPredicted RBP18.24■□□□□ 0.51
RCC1-206ENST00000419074 IQSEC2Q5JU85 1478 aa18.24■□□□□ 0.51
RCC1-206ENST00000419074 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
RCC1-206ENST00000419074 FMN2Q9NZ56 1722 aa18.23■□□□□ 0.51
RCC1-206ENST00000419074 A0A1W2PP64 1363 aa18.23■□□□□ 0.51
RCC1-206ENST00000419074 UBAP1LF5GYI3 381 aa18.23■□□□□ 0.51
RCC1-206ENST00000419074 FOXO3O43524 673 aa18.23■□□□□ 0.51
RCC1-206ENST00000419074 PSME1Q06323 249 aa18.23■□□□□ 0.51
RCC1-206ENST00000419074 CD163L1Q9NR16 1453 aa18.22■□□□□ 0.51
RCC1-206ENST00000419074 KTN1Q86UP2 1357 aaKnown RBP18.22■□□□□ 0.51
RCC1-206ENST00000419074 XIRP1Q702N8 1843 aaKnown RBP18.22■□□□□ 0.51
RCC1-206ENST00000419074 USP32Q8NFA0 1604 aa18.21■□□□□ 0.51
RCC1-206ENST00000419074 DIEXFQ68CQ4 756 aaKnown RBP18.2■□□□□ 0.5
RCC1-206ENST00000419074 KRT28Q7Z3Y7 464 aa18.2■□□□□ 0.5
RCC1-206ENST00000419074 NPHP3Q7Z494 1330 aa18.19■□□□□ 0.5
RCC1-206ENST00000419074 TTC21BQ7Z4L5 1316 aa18.18■□□□□ 0.5
RCC1-206ENST00000419074 BRD4O60885 1362 aaPredicted RBP18.17■□□□□ 0.5
RCC1-206ENST00000419074 USP6P35125 1406 aa18.17■□□□□ 0.5
RCC1-206ENST00000419074 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
RCC1-206ENST00000419074 PIP4K2BP78356 416 aa18.17■□□□□ 0.5
RCC1-206ENST00000419074 AMER1Q5JTC6 1135 aaPredicted RBP18.17■□□□□ 0.5
RCC1-206ENST00000419074 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
RCC1-206ENST00000419074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.16■□□□□ 0.5
RCC1-206ENST00000419074 DDX17Q92841 729 aaKnown RBP18.16■□□□□ 0.5
RCC1-206ENST00000419074 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
RCC1-206ENST00000419074 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
RCC1-206ENST00000419074 FYB1O15117 783 aa18.15■□□□□ 0.5
RCC1-206ENST00000419074 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
RCC1-206ENST00000419074 XPCQ01831 940 aaPredicted RBP18.15■□□□□ 0.5
RCC1-206ENST00000419074 TTC21AQ8NDW8 1320 aa18.15■□□□□ 0.5
RCC1-206ENST00000419074 SSH2Q76I76 1423 aa18.15■□□□□ 0.5
RCC1-206ENST00000419074 TOPAZ1Q8N9V7 1692 aa18.14■□□□□ 0.49
RCC1-206ENST00000419074 MYOM1P52179 1685 aa18.13■□□□□ 0.49
RCC1-206ENST00000419074 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms