RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 ABCA3Q99758 1704 aa15.04■□□□□ -0
HDLBP-206ENST00000417540 HRCP23327 699 aa15.04■□□□□ -0
HDLBP-206ENST00000417540 BRINP3Q76B58 766 aa15.04■□□□□ -0
HDLBP-206ENST00000417540 DDX17Q92841 729 aaKnown RBP15.04■□□□□ -0
HDLBP-206ENST00000417540 KIF1AQ12756 1690 aa15.03■□□□□ -0
HDLBP-206ENST00000417540 QRICH2Q9H0J4 1663 aa15.03■□□□□ -0
HDLBP-206ENST00000417540 SLAIN2Q9P270 581 aa15.03■□□□□ -0
HDLBP-206ENST00000417540 TOPAZ1Q8N9V7 1692 aa15.03■□□□□ -0
HDLBP-206ENST00000417540 WAPLQ7Z5K2 1190 aa15.02■□□□□ -0
HDLBP-206ENST00000417540 C19orf44Q9H6X5 657 aa15.02■□□□□ -0
HDLBP-206ENST00000417540 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
HDLBP-206ENST00000417540 ATF3P18847 181 aa15.01□□□□□ -0.01
HDLBP-206ENST00000417540 CADPS2Q86UW7 1296 aa15.01□□□□□ -0.01
HDLBP-206ENST00000417540 ABCC11Q96J66 1382 aa15□□□□□ -0.01
HDLBP-206ENST00000417540 KDM2AQ9Y2K7 1162 aa15□□□□□ -0.01
HDLBP-206ENST00000417540 PXDNQ92626 1479 aa15□□□□□ -0.01
HDLBP-206ENST00000417540 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
HDLBP-206ENST00000417540 DCAF11Q8TEB1 546 aa14.99□□□□□ -0.01
HDLBP-206ENST00000417540 C14orf93Q9H972 538 aaKnown RBP14.99□□□□□ -0.01
HDLBP-206ENST00000417540 TRPM3Q9HCF6 1732 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-206ENST00000417540 SIN3AQ96ST3 1273 aa14.98□□□□□ -0.01
HDLBP-206ENST00000417540 ITSN1Q15811 1721 aa14.97□□□□□ -0.01
HDLBP-206ENST00000417540 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
HDLBP-206ENST00000417540 SAFB2Q14151 953 aaKnown RBP eCLIP14.97□□□□□ -0.01
HDLBP-206ENST00000417540 POTEAQ6S8J7 498 aa14.97□□□□□ -0.01
HDLBP-206ENST00000417540 JCADQ9P266 1359 aa14.97□□□□□ -0.01
HDLBP-206ENST00000417540 MARF1Q9Y4F3 1742 aaKnown RBP14.96□□□□□ -0.01
HDLBP-206ENST00000417540 TULP4Q9NRJ4 1543 aa14.96□□□□□ -0.02
HDLBP-206ENST00000417540 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
HDLBP-206ENST00000417540 ORAI2Q96SN7 254 aa14.95□□□□□ -0.02
HDLBP-206ENST00000417540 PNPLA6Q8IY17 1366 aa14.95□□□□□ -0.02
HDLBP-206ENST00000417540 ATP7BP35670 1465 aa14.95□□□□□ -0.02
HDLBP-206ENST00000417540 PRAM1Q96QH2 718 aa14.94□□□□□ -0.02
HDLBP-206ENST00000417540 TRAK1Q9UPV9 953 aa14.93□□□□□ -0.02
HDLBP-206ENST00000417540 ALS2Q96Q42 1657 aa14.92□□□□□ -0.02
HDLBP-206ENST00000417540 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
HDLBP-206ENST00000417540 HIRIP3Q9BW71 556 aaPredicted RBP14.91□□□□□ -0.02
HDLBP-206ENST00000417540 XPCQ01831 940 aaPredicted RBP14.9□□□□□ -0.02
HDLBP-206ENST00000417540 PRR36Q9H6K5 1346 aa14.9□□□□□ -0.02
HDLBP-206ENST00000417540 NBPF1Q3BBV0 1214 aa14.89□□□□□ -0.03
HDLBP-206ENST00000417540 PLCH1Q4KWH8 1693 aa14.89□□□□□ -0.03
HDLBP-206ENST00000417540 MINK1Q8N4C8 1332 aaPredicted RBP14.89□□□□□ -0.03
HDLBP-206ENST00000417540 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
HDLBP-206ENST00000417540 NEUROD1Q13562 356 aa14.88□□□□□ -0.03
HDLBP-206ENST00000417540 L3MBTL2Q969R5 705 aa14.88□□□□□ -0.03
HDLBP-206ENST00000417540 ANKARQ7Z5J8 1434 aa14.87□□□□□ -0.03
HDLBP-206ENST00000417540 RALGAPBQ86X10 1494 aa14.87□□□□□ -0.03
HDLBP-206ENST00000417540 SOS2Q07890 1332 aaPredicted RBP14.86□□□□□ -0.03
HDLBP-206ENST00000417540 ESCO1Q5FWF5 840 aa14.85□□□□□ -0.03
HDLBP-206ENST00000417540 TNS3Q68CZ2 1445 aa14.84□□□□□ -0.03
HDLBP-206ENST00000417540 NRKQ7Z2Y5 1582 aa14.84□□□□□ -0.03
HDLBP-206ENST00000417540 NRAPQ86VF7 1730 aa14.83□□□□□ -0.03
HDLBP-206ENST00000417540 NUTM2BA6NNL0 878 aaPredicted RBP14.83□□□□□ -0.04
HDLBP-206ENST00000417540 NUTM2EB1AL46 878 aaPredicted RBP14.83□□□□□ -0.04
HDLBP-206ENST00000417540 NBPF8Q3BBV2 869 aa14.83□□□□□ -0.04
HDLBP-206ENST00000417540 NUTM2AQ8IVF1 878 aaPredicted RBP14.83□□□□□ -0.04
HDLBP-206ENST00000417540 POGKQ9P215 609 aa14.83□□□□□ -0.04
HDLBP-206ENST00000417540 SPATA31A6Q5VVP1 1343 aa14.83□□□□□ -0.04
HDLBP-206ENST00000417540 EP400Q96L91 3159 aa14.83□□□□□ -0.04
HDLBP-206ENST00000417540 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.82□□□□□ -0.04
HDLBP-206ENST00000417540 AKAP12Q02952 1782 aa14.82□□□□□ -0.04
HDLBP-206ENST00000417540 NPHP3Q7Z494 1330 aa14.81□□□□□ -0.04
HDLBP-206ENST00000417540 ROCK2O75116 1388 aaKnown RBP14.81□□□□□ -0.04
HDLBP-206ENST00000417540 FOXO3O43524 673 aa14.8□□□□□ -0.04
HDLBP-206ENST00000417540 SIRT1Q96EB6 747 aa14.8□□□□□ -0.04
HDLBP-206ENST00000417540 GPRASP1Q5JY77 1395 aa14.79□□□□□ -0.04
HDLBP-206ENST00000417540 PMFBP1Q8TBY8 1022 aa14.79□□□□□ -0.04
HDLBP-206ENST00000417540 TONSLQ96HA7 1378 aa14.79□□□□□ -0.04
HDLBP-206ENST00000417540 PIK3C2AO00443 1686 aa14.78□□□□□ -0.04
HDLBP-206ENST00000417540 MEX3CQ5U5Q3 659 aaKnown RBP14.78□□□□□ -0.04
HDLBP-206ENST00000417540 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
HDLBP-206ENST00000417540 PHF8Q9UPP1 1060 aa14.77□□□□□ -0.05
HDLBP-206ENST00000417540 RGS12O14924 1447 aa14.76□□□□□ -0.05
HDLBP-206ENST00000417540 AFF2P51816 1311 aa14.76□□□□□ -0.05
HDLBP-206ENST00000417540 WASLO00401 505 aaPredicted RBP14.76□□□□□ -0.05
HDLBP-206ENST00000417540 PLEKHG5O94827 1062 aa14.76□□□□□ -0.05
HDLBP-206ENST00000417540 ADAMTS2O95450 1211 aa14.76□□□□□ -0.05
HDLBP-206ENST00000417540 EIF3AQ14152 1382 aaKnown RBP14.75□□□□□ -0.05
HDLBP-206ENST00000417540 CENPJQ9HC77 1338 aaPredicted RBP14.75□□□□□ -0.05
HDLBP-206ENST00000417540 LRRC59Q96AG4 307 aaKnown RBP14.75□□□□□ -0.05
HDLBP-206ENST00000417540 C8orf37Q96NL8 207 aa14.75□□□□□ -0.05
HDLBP-206ENST00000417540 PCGF6Q9BYE7 350 aa14.75□□□□□ -0.05
HDLBP-206ENST00000417540 GLI3P10071 1580 aa14.75□□□□□ -0.05
HDLBP-206ENST00000417540 NWD2Q9ULI1 1742 aa14.75□□□□□ -0.05
HDLBP-206ENST00000417540 SPATA31A3Q5VYP0 1347 aa14.74□□□□□ -0.05
HDLBP-206ENST00000417540 STAC3Q96MF2 364 aa14.74□□□□□ -0.05
HDLBP-206ENST00000417540 PPIP5K1Q6PFW1 1433 aa14.74□□□□□ -0.05
HDLBP-206ENST00000417540 SBNO1A3KN83 1393 aa14.73□□□□□ -0.05
HDLBP-206ENST00000417540 MYOM1P52179 1685 aa14.72□□□□□ -0.05
HDLBP-206ENST00000417540 BRWD3Q6RI45 1802 aa14.71□□□□□ -0.05
HDLBP-206ENST00000417540 KRT28Q7Z3Y7 464 aa14.71□□□□□ -0.05
HDLBP-206ENST00000417540 UPF1Q92900 1129 aaKnown RBP eCLIP14.71□□□□□ -0.05
HDLBP-206ENST00000417540 SLIT2O94813 1529 aa14.71□□□□□ -0.06
HDLBP-206ENST00000417540 COL14A1Q05707 1796 aaKnown RBP14.7□□□□□ -0.06
HDLBP-206ENST00000417540 ATRNO75882 1429 aa14.7□□□□□ -0.06
HDLBP-206ENST00000417540 CABLES1Q8TDN4 633 aa14.7□□□□□ -0.06
HDLBP-206ENST00000417540 CDK19Q9BWU1 502 aa14.7□□□□□ -0.06
HDLBP-206ENST00000417540 CABP2Q9NPB3 220 aa14.7□□□□□ -0.06
HDLBP-206ENST00000417540 POLR3AO14802 1390 aaPredicted RBP14.7□□□□□ -0.06
HDLBP-206ENST00000417540 BCL9LQ86UU0 1499 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms