RNA–Protein interactions for RNA: ENST00000417105.5

COL9A2-203, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-203ENST00000417105 LRRC59Q96AG4 307 aaKnown RBP32.47■■■□□ 2.79
COL9A2-203ENST00000417105 MYOM2P54296 1465 aa32.47■■■□□ 2.79
COL9A2-203ENST00000417105 C14orf93Q9H972 538 aaKnown RBP32.46■■■□□ 2.79
COL9A2-203ENST00000417105 NRXN1Q9ULB1 1477 aa32.46■■■□□ 2.79
COL9A2-203ENST00000417105 YTHDC2Q9H6S0 1430 aaKnown RBP32.45■■■□□ 2.79
COL9A2-203ENST00000417105 CFAP70Q5T0N1 1121 aa32.45■■■□□ 2.79
COL9A2-203ENST00000417105 PLEKHH1Q9ULM0 1364 aa32.45■■■□□ 2.78
COL9A2-203ENST00000417105 CDC42BPGQ6DT37 1551 aa32.43■■■□□ 2.78
COL9A2-203ENST00000417105 KNDC1Q76NI1 1749 aa32.43■■■□□ 2.78
COL9A2-203ENST00000417105 PNPLA6Q8IY17 1366 aa32.39■■■□□ 2.78
COL9A2-203ENST00000417105 LAMC1P11047 1609 aa32.37■■■□□ 2.77
COL9A2-203ENST00000417105 DHX57Q6P158 1386 aaKnown RBP32.37■■■□□ 2.77
COL9A2-203ENST00000417105 NUTM2FA1L443 756 aa32.37■■■□□ 2.77
COL9A2-203ENST00000417105 ESCO1Q5FWF5 840 aa32.37■■■□□ 2.77
COL9A2-203ENST00000417105 SOS2Q07890 1332 aaPredicted RBP32.36■■■□□ 2.77
COL9A2-203ENST00000417105 KDM2AQ9Y2K7 1162 aa32.35■■■□□ 2.77
COL9A2-203ENST00000417105 ZNF772Q68DY9 489 aaPredicted RBP32.33■■■□□ 2.77
COL9A2-203ENST00000417105 DCAF11Q8TEB1 546 aa32.33■■■□□ 2.77
COL9A2-203ENST00000417105 SIRT1Q96EB6 747 aa32.33■■■□□ 2.77
COL9A2-203ENST00000417105 NPHP3Q7Z494 1330 aa32.28■■■□□ 2.76
COL9A2-203ENST00000417105 SAFB2Q14151 953 aaKnown RBP eCLIP32.28■■■□□ 2.76
COL9A2-203ENST00000417105 PRAM1Q96QH2 718 aa32.28■■■□□ 2.76
COL9A2-203ENST00000417105 FOXO3O43524 673 aa32.27■■■□□ 2.76
COL9A2-203ENST00000417105 AFF2P51816 1311 aa32.26■■■□□ 2.76
COL9A2-203ENST00000417105 XPCQ01831 940 aaPredicted RBP32.26■■■□□ 2.75
COL9A2-203ENST00000417105 FMN2Q9NZ56 1722 aa32.26■■■□□ 2.75
COL9A2-203ENST00000417105 C8orf37Q96NL8 207 aa32.25■■■□□ 2.75
COL9A2-203ENST00000417105 ADGRB1O14514 1584 aa32.24■■■□□ 2.75
COL9A2-203ENST00000417105 ADAMTS2O95450 1211 aa32.23■■■□□ 2.75
COL9A2-203ENST00000417105 POGKQ9P215 609 aa32.23■■■□□ 2.75
COL9A2-203ENST00000417105 PXDNQ92626 1479 aa32.23■■■□□ 2.75
COL9A2-203ENST00000417105 TRAK1Q9UPV9 953 aa32.22■■■□□ 2.75
COL9A2-203ENST00000417105 DLC1Q96QB1 1528 aa32.21■■■□□ 2.75
COL9A2-203ENST00000417105 STAC3Q96MF2 364 aa32.21■■■□□ 2.75
COL9A2-203ENST00000417105 RXRBP28702 533 aa32.16■■■□□ 2.74
COL9A2-203ENST00000417105 NGLY1Q96IV0 654 aa32.16■■■□□ 2.74
COL9A2-203ENST00000417105 COL22A1Q8NFW1 1626 aaPredicted RBP32.14■■■□□ 2.74
COL9A2-203ENST00000417105 KIF1AQ12756 1690 aa32.13■■■□□ 2.73
COL9A2-203ENST00000417105 PHF8Q9UPP1 1060 aa32.13■■■□□ 2.73
COL9A2-203ENST00000417105 HIRIP3Q9BW71 556 aaPredicted RBP32.12■■■□□ 2.73
COL9A2-203ENST00000417105 RGPD8O14715 1765 aaPredicted RBP32.11■■■□□ 2.73
COL9A2-203ENST00000417105 MINK1Q8N4C8 1332 aaPredicted RBP32.1■■■□□ 2.73
COL9A2-203ENST00000417105 KRT28Q7Z3Y7 464 aa32.1■■■□□ 2.73
COL9A2-203ENST00000417105 QTRT2Q9H974 415 aaKnown RBP32.1■■■□□ 2.73
COL9A2-203ENST00000417105 ADGRB2O60241 1585 aa32.07■■■□□ 2.72
COL9A2-203ENST00000417105 SPATA31A3Q5VYP0 1347 aa32.06■■■□□ 2.72
COL9A2-203ENST00000417105 ANKARQ7Z5J8 1434 aa32.04■■■□□ 2.72
COL9A2-203ENST00000417105 USP21Q9UK80 565 aa32.04■■■□□ 2.72
COL9A2-203ENST00000417105 USP32Q8NFA0 1604 aa32.04■■■□□ 2.72
COL9A2-203ENST00000417105 PMFBP1Q8TBY8 1022 aa32.03■■■□□ 2.72
COL9A2-203ENST00000417105 RBM6P78332 1123 aaKnown RBP32.02■■■□□ 2.72
COL9A2-203ENST00000417105 CDK12Q9NYV4 1490 aaPredicted RBP32.02■■■□□ 2.72
COL9A2-203ENST00000417105 PSME1Q06323 249 aa32.01■■■□□ 2.71
COL9A2-203ENST00000417105 FNBP4Q8N3X1 1017 aaPredicted RBP32.01■■■□□ 2.71
COL9A2-203ENST00000417105 WASLO00401 505 aaPredicted RBP31.99■■■□□ 2.71
COL9A2-203ENST00000417105 TNS3Q68CZ2 1445 aa31.99■■■□□ 2.71
COL9A2-203ENST00000417105 ARHGEF28Q8N1W1 1705 aaKnown RBP31.98■■■□□ 2.71
COL9A2-203ENST00000417105 PRR36Q9H6K5 1346 aa31.98■■■□□ 2.71
COL9A2-203ENST00000417105 EIF3AQ14152 1382 aaKnown RBP31.96■■■□□ 2.71
COL9A2-203ENST00000417105 TULP4Q9NRJ4 1543 aa31.95■■■□□ 2.71
COL9A2-203ENST00000417105 RGS12O14924 1447 aa31.95■■■□□ 2.71
COL9A2-203ENST00000417105 PLEKHG5O94827 1062 aa31.95■■■□□ 2.71
COL9A2-203ENST00000417105 NBPF1Q3BBV0 1214 aa31.95■■■□□ 2.71
COL9A2-203ENST00000417105 LMOD2Q6P5Q4 547 aa31.95■■■□□ 2.71
COL9A2-203ENST00000417105 TRPC5Q9UL62 973 aaPredicted RBP31.95■■■□□ 2.71
COL9A2-203ENST00000417105 SBNO1A3KN83 1393 aa31.94■■■□□ 2.7
COL9A2-203ENST00000417105 KIAA1210Q9ULL0 1709 aa31.93■■■□□ 2.7
COL9A2-203ENST00000417105 MARF1Q9Y4F3 1742 aaKnown RBP31.93■■■□□ 2.7
COL9A2-203ENST00000417105 SIN3AQ96ST3 1273 aa31.92■■■□□ 2.7
COL9A2-203ENST00000417105 CABLES1Q8TDN4 633 aa31.91■■■□□ 2.7
COL9A2-203ENST00000417105 UPF1Q92900 1129 aaKnown RBP eCLIP31.91■■■□□ 2.7
COL9A2-203ENST00000417105 ATRNO75882 1429 aa31.91■■■□□ 2.7
COL9A2-203ENST00000417105 BCL9LQ86UU0 1499 aa31.91■■■□□ 2.7
COL9A2-203ENST00000417105 HAP1P54257 671 aaPredicted RBP31.9■■■□□ 2.7
COL9A2-203ENST00000417105 L3MBTL2Q969R5 705 aa31.89■■■□□ 2.7
COL9A2-203ENST00000417105 ARHGEF10O15013 1369 aa31.88■■■□□ 2.69
COL9A2-203ENST00000417105 GPRASP1Q5JY77 1395 aa31.87■■■□□ 2.69
COL9A2-203ENST00000417105 NEUROD1Q13562 356 aa31.86■■■□□ 2.69
COL9A2-203ENST00000417105 NGDNQ8NEJ9 315 aaKnown RBP31.86■■■□□ 2.69
COL9A2-203ENST00000417105 NUDT16Q96DE0 195 aaKnown RBP31.85■■■□□ 2.69
COL9A2-203ENST00000417105 CDK19Q9BWU1 502 aa31.85■■■□□ 2.69
COL9A2-203ENST00000417105 ATP7BP35670 1465 aa31.84■■■□□ 2.69
COL9A2-203ENST00000417105 TRPM3Q9HCF6 1732 aaPredicted RBP31.83■■■□□ 2.69
COL9A2-203ENST00000417105 SLIT2O94813 1529 aa31.82■■■□□ 2.68
COL9A2-203ENST00000417105 UNC5CLQ8IV45 518 aa31.81■■■□□ 2.68
COL9A2-203ENST00000417105 ABCA3Q99758 1704 aa31.78■■■□□ 2.68
COL9A2-203ENST00000417105 GJD4Q96KN9 370 aaPredicted RBP31.78■■■□□ 2.68
COL9A2-203ENST00000417105 PAK3O75914 559 aaPredicted RBP31.77■■■□□ 2.68
COL9A2-203ENST00000417105 ITSN1Q15811 1721 aa31.77■■■□□ 2.68
COL9A2-203ENST00000417105 CENPJQ9HC77 1338 aaPredicted RBP31.76■■■□□ 2.68
COL9A2-203ENST00000417105 ALS2Q96Q42 1657 aa31.76■■■□□ 2.67
COL9A2-203ENST00000417105 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.75■■■□□ 2.67
COL9A2-203ENST00000417105 CCDC61Q9Y6R9 512 aa31.72■■■□□ 2.67
COL9A2-203ENST00000417105 FAM83GA6ND36 823 aa31.71■■■□□ 2.67
COL9A2-203ENST00000417105 RALGAPBQ86X10 1494 aa31.71■■■□□ 2.67
COL9A2-203ENST00000417105 PLCH1Q4KWH8 1693 aa31.7■■■□□ 2.66
COL9A2-203ENST00000417105 TOPAZ1Q8N9V7 1692 aa31.7■■■□□ 2.66
COL9A2-203ENST00000417105 ATAD2Q6PL18 1390 aa31.69■■■□□ 2.66
COL9A2-203ENST00000417105 SRPK2P78362 688 aaKnown RBP31.69■■■□□ 2.66
COL9A2-203ENST00000417105 ACEP12821 1306 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms