RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 RGS12O14924 1447 aa23.24■■□□□ 1.31
SBDSP1-201ENST00000415772 LAMC1P11047 1609 aa23.23■■□□□ 1.31
SBDSP1-201ENST00000415772 STK26Q9P289 416 aa23.23■■□□□ 1.31
SBDSP1-201ENST00000415772 PRAG1Q86YV5 1406 aa23.23■■□□□ 1.31
SBDSP1-201ENST00000415772 TRPC5Q9UL62 973 aaPredicted RBP23.21■■□□□ 1.31
SBDSP1-201ENST00000415772 CDC42BPGQ6DT37 1551 aa23.2■■□□□ 1.3
SBDSP1-201ENST00000415772 LRPPRCP42704 1394 aaKnown RBP23.19■■□□□ 1.3
SBDSP1-201ENST00000415772 ANKRD30BQ9BXX2 1392 aa23.18■■□□□ 1.3
SBDSP1-201ENST00000415772 NUTM2FA1L443 756 aa23.18■■□□□ 1.3
SBDSP1-201ENST00000415772 ATAD2Q6PL18 1390 aa23.17■■□□□ 1.3
SBDSP1-201ENST00000415772 ADGRF5Q8IZF2 1346 aa23.17■■□□□ 1.3
SBDSP1-201ENST00000415772 FOXO3O43524 673 aa23.15■■□□□ 1.3
SBDSP1-201ENST00000415772 XPCQ01831 940 aaPredicted RBP23.15■■□□□ 1.3
SBDSP1-201ENST00000415772 WAPLQ7Z5K2 1190 aa23.14■■□□□ 1.29
SBDSP1-201ENST00000415772 MPHOSPH9Q99550 1183 aa23.14■■□□□ 1.29
SBDSP1-201ENST00000415772 COL22A1Q8NFW1 1626 aaPredicted RBP23.14■■□□□ 1.29
SBDSP1-201ENST00000415772 TMEM132EQ6IEE7 984 aa23.12■■□□□ 1.29
SBDSP1-201ENST00000415772 FNBP4Q8N3X1 1017 aaPredicted RBP23.12■■□□□ 1.29
SBDSP1-201ENST00000415772 HAP1P54257 671 aaPredicted RBP23.1■■□□□ 1.29
SBDSP1-201ENST00000415772 ACIN1Q9UKV3 1341 aaKnown RBP23.09■■□□□ 1.29
SBDSP1-201ENST00000415772 TECPR2O15040 1411 aa23.09■■□□□ 1.29
SBDSP1-201ENST00000415772 ABCC11Q96J66 1382 aa23.09■■□□□ 1.29
SBDSP1-201ENST00000415772 PXDNQ92626 1479 aa23.09■■□□□ 1.29
SBDSP1-201ENST00000415772 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.29
SBDSP1-201ENST00000415772 IFT172Q9UG01 1749 aa23.08■■□□□ 1.29
SBDSP1-201ENST00000415772 MYOM2P54296 1465 aa23.08■■□□□ 1.29
SBDSP1-201ENST00000415772 KNDC1Q76NI1 1749 aa23.08■■□□□ 1.28
SBDSP1-201ENST00000415772 ATRNO75882 1429 aa23.08■■□□□ 1.28
SBDSP1-201ENST00000415772 PIK3C2GO75747 1445 aa23.06■■□□□ 1.28
SBDSP1-201ENST00000415772 YTHDC2Q9H6S0 1430 aaKnown RBP23.06■■□□□ 1.28
SBDSP1-201ENST00000415772 KIF1AQ12756 1690 aa23.06■■□□□ 1.28
SBDSP1-201ENST00000415772 MARF1Q9Y4F3 1742 aaKnown RBP23.05■■□□□ 1.28
SBDSP1-201ENST00000415772 PLEKHH1Q9ULM0 1364 aa23.04■■□□□ 1.28
SBDSP1-201ENST00000415772 FMN2Q9NZ56 1722 aa23.04■■□□□ 1.28
SBDSP1-201ENST00000415772 DHX57Q6P158 1386 aaKnown RBP23.03■■□□□ 1.28
SBDSP1-201ENST00000415772 KRT28Q7Z3Y7 464 aa23.03■■□□□ 1.28
SBDSP1-201ENST00000415772 PSME1Q06323 249 aa23.02■■□□□ 1.28
SBDSP1-201ENST00000415772 GJD4Q96KN9 370 aaPredicted RBP23.02■■□□□ 1.28
SBDSP1-201ENST00000415772 PLEKHG5O94827 1062 aa23.01■■□□□ 1.27
SBDSP1-201ENST00000415772 LMOD2Q6P5Q4 547 aa23.01■■□□□ 1.27
SBDSP1-201ENST00000415772 SPATA31A3Q5VYP0 1347 aa23.01■■□□□ 1.27
SBDSP1-201ENST00000415772 BCL9LQ86UU0 1499 aa23■■□□□ 1.27
SBDSP1-201ENST00000415772 ZRANB1Q9UGI0 708 aa23■■□□□ 1.27
SBDSP1-201ENST00000415772 SAFB2Q14151 953 aaKnown RBP eCLIP22.99■■□□□ 1.27
SBDSP1-201ENST00000415772 CCDC125Q86Z20 511 aa22.99■■□□□ 1.27
SBDSP1-201ENST00000415772 POGKQ9P215 609 aa22.99■■□□□ 1.27
SBDSP1-201ENST00000415772 PHF8Q9UPP1 1060 aa22.99■■□□□ 1.27
SBDSP1-201ENST00000415772 UNC5CLQ8IV45 518 aa22.98■■□□□ 1.27
SBDSP1-201ENST00000415772 SIRT1Q96EB6 747 aa22.98■■□□□ 1.27
SBDSP1-201ENST00000415772 C14orf93Q9H972 538 aaKnown RBP22.98■■□□□ 1.27
SBDSP1-201ENST00000415772 CFAP70Q5T0N1 1121 aa22.97■■□□□ 1.27
SBDSP1-201ENST00000415772 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
SBDSP1-201ENST00000415772 TNS3Q68CZ2 1445 aa22.95■■□□□ 1.26
SBDSP1-201ENST00000415772 PRAM1Q96QH2 718 aa22.95■■□□□ 1.26
SBDSP1-201ENST00000415772 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.95■■□□□ 1.26
SBDSP1-201ENST00000415772 USP32Q8NFA0 1604 aa22.93■■□□□ 1.26
SBDSP1-201ENST00000415772 SF3B2Q13435 895 aaKnown RBP22.92■■□□□ 1.26
SBDSP1-201ENST00000415772 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
SBDSP1-201ENST00000415772 SLIT2O94813 1529 aa22.91■■□□□ 1.26
SBDSP1-201ENST00000415772 ARHGEF10O15013 1369 aa22.9■■□□□ 1.26
SBDSP1-201ENST00000415772 A0A0G2JS52 829 aa22.9■■□□□ 1.26
SBDSP1-201ENST00000415772 MYT1Q01538 1121 aa22.9■■□□□ 1.26
SBDSP1-201ENST00000415772 CABLES1Q8TDN4 633 aa22.9■■□□□ 1.26
SBDSP1-201ENST00000415772 RGPD8O14715 1765 aaPredicted RBP22.9■■□□□ 1.26
SBDSP1-201ENST00000415772 PMFBP1Q8TBY8 1022 aa22.89■■□□□ 1.25
SBDSP1-201ENST00000415772 NRXN1Q9ULB1 1477 aa22.89■■□□□ 1.25
SBDSP1-201ENST00000415772 SBNO1A3KN83 1393 aa22.89■■□□□ 1.25
SBDSP1-201ENST00000415772 GLI3P10071 1580 aa22.87■■□□□ 1.25
SBDSP1-201ENST00000415772 TRAK1Q9UPV9 953 aa22.86■■□□□ 1.25
SBDSP1-201ENST00000415772 EIF3AQ14152 1382 aaKnown RBP22.86■■□□□ 1.25
SBDSP1-201ENST00000415772 BLMP54132 1417 aaPredicted RBP22.85■■□□□ 1.25
SBDSP1-201ENST00000415772 ANKARQ7Z5J8 1434 aa22.85■■□□□ 1.25
SBDSP1-201ENST00000415772 VPS72Q15906 364 aa22.85■■□□□ 1.25
SBDSP1-201ENST00000415772 SEPT12Q8IYM1 358 aa22.85■■□□□ 1.25
SBDSP1-201ENST00000415772 KDM2AQ9Y2K7 1162 aa22.85■■□□□ 1.25
SBDSP1-201ENST00000415772 DLC1Q96QB1 1528 aa22.85■■□□□ 1.25
SBDSP1-201ENST00000415772 GPRASP1Q5JY77 1395 aa22.85■■□□□ 1.25
SBDSP1-201ENST00000415772 RAB3GAP2Q9H2M9 1393 aa22.85■■□□□ 1.25
SBDSP1-201ENST00000415772 HIRIP3Q9BW71 556 aaPredicted RBP22.84■■□□□ 1.25
SBDSP1-201ENST00000415772 PLCH1Q4KWH8 1693 aa22.84■■□□□ 1.25
SBDSP1-201ENST00000415772 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
SBDSP1-201ENST00000415772 NWD2Q9ULI1 1742 aa22.82■■□□□ 1.24
SBDSP1-201ENST00000415772 DCAF11Q8TEB1 546 aa22.81■■□□□ 1.24
SBDSP1-201ENST00000415772 ADGRB2O60241 1585 aa22.8■■□□□ 1.24
SBDSP1-201ENST00000415772 ABCA3Q99758 1704 aa22.79■■□□□ 1.24
SBDSP1-201ENST00000415772 PAK3O75914 559 aaPredicted RBP22.79■■□□□ 1.24
SBDSP1-201ENST00000415772 KRT27Q7Z3Y8 459 aa22.79■■□□□ 1.24
SBDSP1-201ENST00000415772 NGDNQ8NEJ9 315 aaKnown RBP22.79■■□□□ 1.24
SBDSP1-201ENST00000415772 BRWD3Q6RI45 1802 aa22.78■■□□□ 1.24
SBDSP1-201ENST00000415772 FAM83GA6ND36 823 aa22.76■■□□□ 1.23
SBDSP1-201ENST00000415772 STAC3Q96MF2 364 aa22.76■■□□□ 1.23
SBDSP1-201ENST00000415772 BTG4Q9NY30 223 aa22.76■■□□□ 1.23
SBDSP1-201ENST00000415772 WASLO00401 505 aaPredicted RBP22.75■■□□□ 1.23
SBDSP1-201ENST00000415772 DEFB132Q7Z7B7 95 aa22.75■■□□□ 1.23
SBDSP1-201ENST00000415772 TULP4Q9NRJ4 1543 aa22.75■■□□□ 1.23
SBDSP1-201ENST00000415772 ADGRB1O14514 1584 aa22.75■■□□□ 1.23
SBDSP1-201ENST00000415772 FAM98CQ17RN3 349 aaKnown RBP22.74■■□□□ 1.23
SBDSP1-201ENST00000415772 EP400Q96L91 3159 aa22.73■■□□□ 1.23
SBDSP1-201ENST00000415772 COL14A1Q05707 1796 aaKnown RBP22.72■■□□□ 1.23
SBDSP1-201ENST00000415772 BAG6P46379 1132 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms