RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
SMC4P1-201ENST00000414479 CFHP08603 1231 aa12.37□□□□□ -0.43
SMC4P1-201ENST00000414479 RNF40O75150 1001 aa12.36□□□□□ -0.43
SMC4P1-201ENST00000414479 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
SMC4P1-201ENST00000414479 POM121CA8CG34 1229 aa12.35□□□□□ -0.43
SMC4P1-201ENST00000414479 GUCA2AQ02747 115 aa12.35□□□□□ -0.43
SMC4P1-201ENST00000414479 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
SMC4P1-201ENST00000414479 FUT2Q10981 343 aa12.35□□□□□ -0.43
SMC4P1-201ENST00000414479 VARS2Q5ST30 1063 aaKnown RBP12.34□□□□□ -0.43
SMC4P1-201ENST00000414479 PRR14Q9BWN1 585 aa12.34□□□□□ -0.43
SMC4P1-201ENST00000414479 SOX11P35716 441 aa12.33□□□□□ -0.44
SMC4P1-201ENST00000414479 SAMD7Q7Z3H4 446 aa12.33□□□□□ -0.44
SMC4P1-201ENST00000414479 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
SMC4P1-201ENST00000414479 Q3C1V9 767 aa12.32□□□□□ -0.44
SMC4P1-201ENST00000414479 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
SMC4P1-201ENST00000414479 HLA-CQ95604 372 aa12.31□□□□□ -0.44
SMC4P1-201ENST00000414479 HMX1Q9NP08 348 aaPredicted RBP12.31□□□□□ -0.44
SMC4P1-201ENST00000414479 VPS9D1Q9Y2B5 631 aa12.31□□□□□ -0.44
SMC4P1-201ENST00000414479 IRF5Q13568 498 aa12.3□□□□□ -0.44
SMC4P1-201ENST00000414479 PBXIP1Q96AQ6 731 aa12.3□□□□□ -0.44
SMC4P1-201ENST00000414479 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
SMC4P1-201ENST00000414479 CFAP99D6REC4 459 aa12.29□□□□□ -0.44
SMC4P1-201ENST00000414479 RETREG3Q86VR2 466 aa12.29□□□□□ -0.44
SMC4P1-201ENST00000414479 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
SMC4P1-201ENST00000414479 PRR7Q8TB68 274 aa12.28□□□□□ -0.44
SMC4P1-201ENST00000414479 LRRN4Q8WUT4 740 aa12.28□□□□□ -0.44
SMC4P1-201ENST00000414479 DMRTA1Q5VZB9 504 aa12.27□□□□□ -0.45
SMC4P1-201ENST00000414479 EMP3P54852 163 aa12.26□□□□□ -0.45
SMC4P1-201ENST00000414479 DESI1Q6ICB0 168 aa12.26□□□□□ -0.45
SMC4P1-201ENST00000414479 AEBP1Q8IUX7 1158 aa12.26□□□□□ -0.45
SMC4P1-201ENST00000414479 LRCH3Q96II8 777 aa12.26□□□□□ -0.45
SMC4P1-201ENST00000414479 TK2O00142 265 aa12.25□□□□□ -0.45
SMC4P1-201ENST00000414479 VAC14Q08AM6 782 aa12.25□□□□□ -0.45
SMC4P1-201ENST00000414479 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
SMC4P1-201ENST00000414479 ZFRQ96KR1 1074 aaKnown RBP12.25□□□□□ -0.45
SMC4P1-201ENST00000414479 AXIN2Q9Y2T1 843 aa12.25□□□□□ -0.45
SMC4P1-201ENST00000414479 ZNF687Q8N1G0 1237 aa12.24□□□□□ -0.45
SMC4P1-201ENST00000414479 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
SMC4P1-201ENST00000414479 USTQ9Y2C2 406 aa12.23□□□□□ -0.45
SMC4P1-201ENST00000414479 ACTN4O43707 911 aaKnown RBP12.22□□□□□ -0.45
SMC4P1-201ENST00000414479 EIF4G2P78344 907 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMC4P1-201ENST00000414479 SEMA3FQ13275 785 aa12.22□□□□□ -0.45
SMC4P1-201ENST00000414479 PPP1R12CQ9BZL4 782 aa12.22□□□□□ -0.45
SMC4P1-201ENST00000414479 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
SMC4P1-201ENST00000414479 MORN1Q5T089 497 aa12.21□□□□□ -0.45
SMC4P1-201ENST00000414479 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
SMC4P1-201ENST00000414479 ADAMTS19Q8TE59 1207 aa12.2□□□□□ -0.46
SMC4P1-201ENST00000414479 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
SMC4P1-201ENST00000414479 ALG2Q9H553 416 aa12.2□□□□□ -0.46
SMC4P1-201ENST00000414479 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
SMC4P1-201ENST00000414479 GPR37L1O60883 481 aa12.19□□□□□ -0.46
SMC4P1-201ENST00000414479 RFX1P22670 979 aa12.19□□□□□ -0.46
SMC4P1-201ENST00000414479 NR6A1Q15406 480 aa12.19□□□□□ -0.46
SMC4P1-201ENST00000414479 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
SMC4P1-201ENST00000414479 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
SMC4P1-201ENST00000414479 OTUD5Q96G74 571 aa12.18□□□□□ -0.46
SMC4P1-201ENST00000414479 GOLGA8CPA6NN73 597 aa12.17□□□□□ -0.46
SMC4P1-201ENST00000414479 CFAP70Q5T0N1 1121 aa12.17□□□□□ -0.46
SMC4P1-201ENST00000414479 ZNF592Q92610 1267 aa12.17□□□□□ -0.46
SMC4P1-201ENST00000414479 SLC27A5Q9Y2P5 690 aa12.17□□□□□ -0.46
SMC4P1-201ENST00000414479 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.16□□□□□ -0.46
SMC4P1-201ENST00000414479 PALM3A6NDB9 673 aaPredicted RBP12.16□□□□□ -0.46
SMC4P1-201ENST00000414479 ANKK1Q8NFD2 765 aa12.16□□□□□ -0.46
SMC4P1-201ENST00000414479 EPS8L1Q8TE68 723 aa12.16□□□□□ -0.46
SMC4P1-201ENST00000414479 SALL2Q9Y467 1007 aaPredicted RBP12.16□□□□□ -0.46
SMC4P1-201ENST00000414479 USB1Q9BQ65 265 aaKnown RBP12.15□□□□□ -0.46
SMC4P1-201ENST00000414479 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
SMC4P1-201ENST00000414479 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
SMC4P1-201ENST00000414479 PER1O15534 1290 aaPredicted RBP12.14□□□□□ -0.47
SMC4P1-201ENST00000414479 LMOD1P29536 600 aaPredicted RBP12.14□□□□□ -0.47
SMC4P1-201ENST00000414479 PUS10Q3MIT2 529 aaKnown RBP12.14□□□□□ -0.47
SMC4P1-201ENST00000414479 LYPD8Q6UX82 237 aa12.14□□□□□ -0.47
SMC4P1-201ENST00000414479 ST18O60284 1047 aa12.13□□□□□ -0.47
SMC4P1-201ENST00000414479 NR1I2O75469 434 aa12.13□□□□□ -0.47
SMC4P1-201ENST00000414479 PPP4CP60510 307 aa12.13□□□□□ -0.47
SMC4P1-201ENST00000414479 FMNL1O95466 1100 aaPredicted RBP12.12□□□□□ -0.47
SMC4P1-201ENST00000414479 BRD1O95696 1058 aa12.12□□□□□ -0.47
SMC4P1-201ENST00000414479 KCNA1Q09470 495 aa12.12□□□□□ -0.47
SMC4P1-201ENST00000414479 NR1H3Q13133 447 aa12.12□□□□□ -0.47
SMC4P1-201ENST00000414479 TMCO4Q5TGY1 634 aa12.12□□□□□ -0.47
SMC4P1-201ENST00000414479 ADGRD1Q6QNK2 874 aa12.11□□□□□ -0.47
SMC4P1-201ENST00000414479 ZBBXA8MT70 800 aa12.1□□□□□ -0.47
SMC4P1-201ENST00000414479 MARVELD3Q96A59 401 aa12.1□□□□□ -0.47
SMC4P1-201ENST00000414479 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
SMC4P1-201ENST00000414479 PTPRNQ16849 979 aa12.09□□□□□ -0.47
SMC4P1-201ENST00000414479 FKBPLQ9UIM3 349 aa12.09□□□□□ -0.47
SMC4P1-201ENST00000414479 PCDHB3Q9Y5E6 796 aa12.09□□□□□ -0.47
SMC4P1-201ENST00000414479 LSM11P83369 360 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMC4P1-201ENST00000414479 UCN2Q96RP3 112 aa12.08□□□□□ -0.48
SMC4P1-201ENST00000414479 MAFBQ9Y5Q3 323 aaPredicted RBP12.08□□□□□ -0.48
SMC4P1-201ENST00000414479 SOWAHBA6NEL2 793 aa12.07□□□□□ -0.48
SMC4P1-201ENST00000414479 ATP9BO43861 1147 aa12.07□□□□□ -0.48
SMC4P1-201ENST00000414479 ATG7O95352 703 aa12.07□□□□□ -0.48
SMC4P1-201ENST00000414479 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
SMC4P1-201ENST00000414479 RNF19BQ6ZMZ0 732 aa12.07□□□□□ -0.48
SMC4P1-201ENST00000414479 TSR3Q9UJK0 312 aaKnown RBP12.07□□□□□ -0.48
SMC4P1-201ENST00000414479 HPS5Q9UPZ3 1129 aa12.07□□□□□ -0.48
SMC4P1-201ENST00000414479 JUNDP17535 347 aa12.06□□□□□ -0.48
SMC4P1-201ENST00000414479 SRPK2P78362 688 aaKnown RBP12.06□□□□□ -0.48
SMC4P1-201ENST00000414479 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms