RNA–Protein interactions for RNA: ENST00000413945.5

LINC00472-201, long intergenic non-protein coding RNA 472, humanhuman

TSL 3

Gene LINC00472, Length 662 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-201ENST00000413945 SETD5Q9C0A6 1442 aa9.8□□□□□ -0.84
LINC00472-201ENST00000413945 NKTRP30414 1462 aaKnown RBP9.79□□□□□ -0.84
LINC00472-201ENST00000413945 ARHGAP5Q13017 1502 aa9.79□□□□□ -0.84
LINC00472-201ENST00000413945 R3HDM1Q15032 1099 aaKnown RBP9.79□□□□□ -0.84
LINC00472-201ENST00000413945 COL13A1Q5TAT6 717 aaPredicted RBP9.78□□□□□ -0.84
LINC00472-201ENST00000413945 MAST1Q9Y2H9 1570 aa9.77□□□□□ -0.85
LINC00472-201ENST00000413945 KCNA6P17658 529 aa9.77□□□□□ -0.85
LINC00472-201ENST00000413945 P3H3Q8IVL6 736 aa9.77□□□□□ -0.85
LINC00472-201ENST00000413945 RALGAPBQ86X10 1494 aa9.77□□□□□ -0.85
LINC00472-201ENST00000413945 SAMD9LQ8IVG5 1584 aa9.76□□□□□ -0.85
LINC00472-201ENST00000413945 SF3B2Q13435 895 aaKnown RBP9.76□□□□□ -0.85
LINC00472-201ENST00000413945 SLIT1O75093 1534 aa9.76□□□□□ -0.85
LINC00472-201ENST00000413945 NCOA2Q15596 1464 aa9.75□□□□□ -0.85
LINC00472-201ENST00000413945 PLEKHG5O94827 1062 aa9.75□□□□□ -0.85
LINC00472-201ENST00000413945 GGT6Q6P531 493 aa9.75□□□□□ -0.85
LINC00472-201ENST00000413945 PROSER2Q86WR7 435 aaPredicted RBP9.75□□□□□ -0.85
LINC00472-201ENST00000413945 FNBP4Q8N3X1 1017 aaPredicted RBP9.75□□□□□ -0.85
LINC00472-201ENST00000413945 USP21Q9UK80 565 aa9.75□□□□□ -0.85
LINC00472-201ENST00000413945 A2MP01023 1474 aa9.74□□□□□ -0.85
LINC00472-201ENST00000413945 CDC42BPBQ9Y5S2 1711 aa9.74□□□□□ -0.85
LINC00472-201ENST00000413945 LTKP29376 864 aa9.74□□□□□ -0.85
LINC00472-201ENST00000413945 C3orf67Q6ZVT6 689 aa9.74□□□□□ -0.85
LINC00472-201ENST00000413945 UBR1Q8IWV7 1749 aa9.73□□□□□ -0.85
LINC00472-201ENST00000413945 BRWD3Q6RI45 1802 aa9.73□□□□□ -0.85
LINC00472-201ENST00000413945 PNPLA6Q8IY17 1366 aa9.73□□□□□ -0.85
LINC00472-201ENST00000413945 HOXB3P14651 431 aaPredicted RBP9.72□□□□□ -0.85
LINC00472-201ENST00000413945 MROH1Q8NDA8 1641 aa9.71□□□□□ -0.85
LINC00472-201ENST00000413945 HSPA6P17066 643 aa9.71□□□□□ -0.86
LINC00472-201ENST00000413945 BAG6P46379 1132 aa9.71□□□□□ -0.86
LINC00472-201ENST00000413945 CAMSAP2Q08AD1 1489 aa9.71□□□□□ -0.86
LINC00472-201ENST00000413945 TNS4Q8IZW8 715 aa9.7□□□□□ -0.86
LINC00472-201ENST00000413945 INO80Q9ULG1 1556 aaPredicted RBP9.7□□□□□ -0.86
LINC00472-201ENST00000413945 DISP2A7MBM2 1401 aa9.69□□□□□ -0.86
LINC00472-201ENST00000413945 TET3O43151 1660 aa9.69□□□□□ -0.86
LINC00472-201ENST00000413945 BRINP3Q76B58 766 aa9.68□□□□□ -0.86
LINC00472-201ENST00000413945 SHANK3Q9BYB0 1731 aa9.68□□□□□ -0.86
LINC00472-201ENST00000413945 GLI3P10071 1580 aa9.67□□□□□ -0.86
LINC00472-201ENST00000413945 NCOA3Q9Y6Q9 1424 aa9.67□□□□□ -0.86
LINC00472-201ENST00000413945 L3MBTL3Q96JM7 780 aaPredicted RBP9.67□□□□□ -0.86
LINC00472-201ENST00000413945 GJD4Q96KN9 370 aaPredicted RBP9.67□□□□□ -0.86
LINC00472-201ENST00000413945 PCDHB8Q9UN66 801 aa9.67□□□□□ -0.86
LINC00472-201ENST00000413945 PREX2Q70Z35 1606 aa9.67□□□□□ -0.86
LINC00472-201ENST00000413945 ASXL1Q8IXJ9 1541 aa9.66□□□□□ -0.86
LINC00472-201ENST00000413945 GPATCH8Q9UKJ3 1502 aaKnown RBP9.66□□□□□ -0.86
LINC00472-201ENST00000413945 PTCH1Q13635 1447 aa9.66□□□□□ -0.86
LINC00472-201ENST00000413945 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
LINC00472-201ENST00000413945 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
LINC00472-201ENST00000413945 TXNDC2Q86VQ3 553 aa9.66□□□□□ -0.86
LINC00472-201ENST00000413945 LRRC59Q96AG4 307 aaKnown RBP9.66□□□□□ -0.86
LINC00472-201ENST00000413945 ARHGAP35Q9NRY4 1499 aa9.66□□□□□ -0.86
LINC00472-201ENST00000413945 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.65□□□□□ -0.86
LINC00472-201ENST00000413945 PPP1R1BQ9UD71 204 aaPredicted RBP9.65□□□□□ -0.86
LINC00472-201ENST00000413945 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
LINC00472-201ENST00000413945 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
LINC00472-201ENST00000413945 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.64□□□□□ -0.87
LINC00472-201ENST00000413945 SPAG9O60271 1321 aaKnown RBP9.63□□□□□ -0.87
LINC00472-201ENST00000413945 SPON1Q9HCB6 807 aa9.63□□□□□ -0.87
LINC00472-201ENST00000413945 RGPD1P0DJD0 1748 aa9.62□□□□□ -0.87
LINC00472-201ENST00000413945 CADPS2Q86UW7 1296 aa9.62□□□□□ -0.87
LINC00472-201ENST00000413945 PLCD3Q8N3E9 789 aa9.62□□□□□ -0.87
LINC00472-201ENST00000413945 DNAJC5GQ8N7S2 189 aa9.62□□□□□ -0.87
LINC00472-201ENST00000413945 ERBB3P21860 1342 aa9.61□□□□□ -0.87
LINC00472-201ENST00000413945 KCNQ2O43526 872 aa9.61□□□□□ -0.87
LINC00472-201ENST00000413945 PYGBP11216 843 aa9.61□□□□□ -0.87
LINC00472-201ENST00000413945 TNS1Q9HBL0 1735 aaKnown RBP9.61□□□□□ -0.87
LINC00472-201ENST00000413945 ERVK-7P63135 1459 aa9.59□□□□□ -0.87
LINC00472-201ENST00000413945 PCNTO95613 3336 aa9.59□□□□□ -0.87
LINC00472-201ENST00000413945 PRXQ9BXM0 1461 aa9.59□□□□□ -0.87
LINC00472-201ENST00000413945 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.88
LINC00472-201ENST00000413945 TROQ12816 1431 aaPredicted RBP9.58□□□□□ -0.88
LINC00472-201ENST00000413945 SYCP2Q9BX26 1530 aa9.58□□□□□ -0.88
LINC00472-201ENST00000413945 NRKQ7Z2Y5 1582 aa9.58□□□□□ -0.88
LINC00472-201ENST00000413945 TNS2Q63HR2 1409 aa9.57□□□□□ -0.88
LINC00472-201ENST00000413945 COL22A1Q8NFW1 1626 aaPredicted RBP9.57□□□□□ -0.88
LINC00472-201ENST00000413945 VARS2Q5ST30 1063 aaKnown RBP9.57□□□□□ -0.88
LINC00472-201ENST00000413945 DPY19L2Q6NUT2 758 aa9.57□□□□□ -0.88
LINC00472-201ENST00000413945 SLC26A8Q96RN1 970 aa9.57□□□□□ -0.88
LINC00472-201ENST00000413945 EID1Q9Y6B2 187 aa9.57□□□□□ -0.88
LINC00472-201ENST00000413945 TMEM2Q9UHN6 1383 aa9.57□□□□□ -0.88
LINC00472-201ENST00000413945 RREB1Q92766 1687 aa9.57□□□□□ -0.88
LINC00472-201ENST00000413945 MARF1Q9Y4F3 1742 aaKnown RBP9.56□□□□□ -0.88
LINC00472-201ENST00000413945 ONECUT3O60422 494 aaPredicted RBP9.56□□□□□ -0.88
LINC00472-201ENST00000413945 EZH2Q15910 746 aaKnown RBP9.56□□□□□ -0.88
LINC00472-201ENST00000413945 SEPT12Q8IYM1 358 aa9.56□□□□□ -0.88
LINC00472-201ENST00000413945 C19orf44Q9H6X5 657 aa9.56□□□□□ -0.88
LINC00472-201ENST00000413945 LAMC1P11047 1609 aa9.56□□□□□ -0.88
LINC00472-201ENST00000413945 MYOM1P52179 1685 aa9.55□□□□□ -0.88
LINC00472-201ENST00000413945 KRT27Q7Z3Y8 459 aa9.55□□□□□ -0.88
LINC00472-201ENST00000413945 CAMKK2Q96RR4 588 aa9.55□□□□□ -0.88
LINC00472-201ENST00000413945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.88
LINC00472-201ENST00000413945 ZBTB47Q9UFB7 747 aaPredicted RBP9.55□□□□□ -0.88
LINC00472-201ENST00000413945 GOLGB1Q14789 3259 aaKnown RBP9.55□□□□□ -0.88
LINC00472-201ENST00000413945 NUP188Q5SRE5 1749 aa9.55□□□□□ -0.88
LINC00472-201ENST00000413945 WASHC2CQ9Y4E1 1318 aa9.55□□□□□ -0.88
LINC00472-201ENST00000413945 MYOM2P54296 1465 aa9.54□□□□□ -0.88
LINC00472-201ENST00000413945 ATF3P18847 181 aa9.54□□□□□ -0.88
LINC00472-201ENST00000413945 DCCP43146 1447 aa9.54□□□□□ -0.88
LINC00472-201ENST00000413945 DHX29Q7Z478 1369 aaKnown RBP9.53□□□□□ -0.88
LINC00472-201ENST00000413945 PARD3Q8TEW0 1356 aa9.53□□□□□ -0.88
LINC00472-201ENST00000413945 FAM83GA6ND36 823 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms