RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 C19orf44Q9H6X5 657 aa43.34■■■■■ 4.53
CSNK1E-206ENST00000413574 MINK1Q8N4C8 1332 aaPredicted RBP43.31■■■■■ 4.52
CSNK1E-206ENST00000413574 CENPJQ9HC77 1338 aaPredicted RBP43.31■■■■■ 4.52
CSNK1E-206ENST00000413574 QRICH2Q9H0J4 1663 aa43.31■■■■■ 4.52
CSNK1E-206ENST00000413574 HIRIP3Q9BW71 556 aaPredicted RBP43.3■■■■■ 4.52
CSNK1E-206ENST00000413574 EIF3AQ14152 1382 aaKnown RBP43.28■■■■■ 4.52
CSNK1E-206ENST00000413574 USP47Q96K76 1375 aa43.26■■■■■ 4.52
CSNK1E-206ENST00000413574 ATF3P18847 181 aa43.22■■■■■ 4.51
CSNK1E-206ENST00000413574 UBAP1LF5GYI3 381 aa43.21■■■■■ 4.51
CSNK1E-206ENST00000413574 CDC42BPGQ6DT37 1551 aa43.2■■■■■ 4.51
CSNK1E-206ENST00000413574 DCCP43146 1447 aa43.2■■■■■ 4.51
CSNK1E-206ENST00000413574 ST20-MTHFSA0A0A6YYL1 179 aa43.19■■■■■ 4.51
CSNK1E-206ENST00000413574 ADGRB2O60241 1585 aa43.19■■■■■ 4.5
CSNK1E-206ENST00000413574 CADPS2Q86UW7 1296 aa43.18■■■■■ 4.5
CSNK1E-206ENST00000413574 ZEB1P37275 1124 aaPredicted RBP43.15■■■■■ 4.5
CSNK1E-206ENST00000413574 TOM1O60784 492 aa43.14■■■■■ 4.5
CSNK1E-206ENST00000413574 FMN2Q9NZ56 1722 aa43.14■■■■■ 4.5
CSNK1E-206ENST00000413574 NUTM2FA1L443 756 aa43.13■■■■■ 4.49
CSNK1E-206ENST00000413574 MST1RQ04912 1400 aa43.1■■■■■ 4.49
CSNK1E-206ENST00000413574 SLAIN2Q9P270 581 aa43.1■■■■■ 4.49
CSNK1E-206ENST00000413574 WASLO00401 505 aaPredicted RBP43.09■■■■■ 4.49
CSNK1E-206ENST00000413574 EIF4G2P78344 907 aaKnown RBP eCLIP43.08■■■■■ 4.49
CSNK1E-206ENST00000413574 PIP4K2BP78356 416 aa43.08■■■■■ 4.49
CSNK1E-206ENST00000413574 RGPD8O14715 1765 aaPredicted RBP43.07■■■■■ 4.49
CSNK1E-206ENST00000413574 TULP4Q9NRJ4 1543 aa43.07■■■■■ 4.48
CSNK1E-206ENST00000413574 HSPA5P11021 654 aaKnown RBP43.06■■■■■ 4.48
CSNK1E-206ENST00000413574 TESK2Q96S53 571 aa43.06■■■■■ 4.48
CSNK1E-206ENST00000413574 CDK19Q9BWU1 502 aa43.05■■■■■ 4.48
CSNK1E-206ENST00000413574 SBNO2Q9Y2G9 1366 aa43.03■■■■■ 4.48
CSNK1E-206ENST00000413574 SCAF1Q9H7N4 1312 aaKnown RBP43.03■■■■■ 4.48
CSNK1E-206ENST00000413574 C1orf167Q5SNV9 1468 aa43.02■■■■■ 4.48
CSNK1E-206ENST00000413574 USP32Q8NFA0 1604 aa43.02■■■■■ 4.48
CSNK1E-206ENST00000413574 EVC2Q86UK5 1308 aa42.98■■■■■ 4.47
CSNK1E-206ENST00000413574 CABP2Q9NPB3 220 aa42.97■■■■■ 4.47
CSNK1E-206ENST00000413574 ROBO1Q9Y6N7 1651 aa42.97■■■■■ 4.47
CSNK1E-206ENST00000413574 PRR36Q9H6K5 1346 aa42.97■■■■■ 4.47
CSNK1E-206ENST00000413574 SRPK2P78362 688 aaKnown RBP42.96■■■■■ 4.47
CSNK1E-206ENST00000413574 ORAI2Q96SN7 254 aa42.95■■■■■ 4.47
CSNK1E-206ENST00000413574 ESCO1Q5FWF5 840 aa42.91■■■■■ 4.46
CSNK1E-206ENST00000413574 BRINP3Q76B58 766 aa42.91■■■■■ 4.46
CSNK1E-206ENST00000413574 ATP7BP35670 1465 aa42.9■■■■■ 4.46
CSNK1E-206ENST00000413574 FBXO41Q8TF61 875 aa42.9■■■■■ 4.46
CSNK1E-206ENST00000413574 NUDT16Q96DE0 195 aaKnown RBP42.9■■■■■ 4.46
CSNK1E-206ENST00000413574 ANKARQ7Z5J8 1434 aa42.9■■■■■ 4.46
CSNK1E-206ENST00000413574 DISP3Q9P2K9 1392 aa42.9■■■■■ 4.46
CSNK1E-206ENST00000413574 TMF1P82094 1093 aa42.84■■■■■ 4.45
CSNK1E-206ENST00000413574 ITSN1Q15811 1721 aa42.83■■■■■ 4.45
CSNK1E-206ENST00000413574 TOPAZ1Q8N9V7 1692 aa42.83■■■■■ 4.45
CSNK1E-206ENST00000413574 SLC24A1O60721 1099 aa42.81■■■■■ 4.44
CSNK1E-206ENST00000413574 PMFBP1Q8TBY8 1022 aa42.8■■■■■ 4.44
CSNK1E-206ENST00000413574 DDX17Q92841 729 aaKnown RBP42.79■■■■■ 4.44
CSNK1E-206ENST00000413574 PHF8Q9UPP1 1060 aa42.79■■■■■ 4.44
CSNK1E-206ENST00000413574 CCDC61Q9Y6R9 512 aa42.79■■■■■ 4.44
CSNK1E-206ENST00000413574 KIF1AQ12756 1690 aa42.76■■■■■ 4.44
CSNK1E-206ENST00000413574 PPIP5K1Q6PFW1 1433 aa42.75■■■■■ 4.43
CSNK1E-206ENST00000413574 NHSL1Q5SYE7 1610 aa42.73■■■■■ 4.43
CSNK1E-206ENST00000413574 C11orf95C9JLR9 678 aaPredicted RBP42.73■■■■■ 4.43
CSNK1E-206ENST00000413574 FOXO3O43524 673 aa42.72■■■■■ 4.43
CSNK1E-206ENST00000413574 ATAD2Q6PL18 1390 aa42.71■■■■■ 4.43
CSNK1E-206ENST00000413574 CABP1Q9NZU7 370 aa42.71■■■■■ 4.43
CSNK1E-206ENST00000413574 PHLPP1O60346 1717 aa42.69■■■■■ 4.42
CSNK1E-206ENST00000413574 PUS7Q96PZ0 661 aaKnown RBP42.68■■■■■ 4.42
CSNK1E-206ENST00000413574 AHDC1Q5TGY3 1603 aaPredicted RBP42.67■■■■■ 4.42
CSNK1E-206ENST00000413574 XPCQ01831 940 aaPredicted RBP42.66■■■■■ 4.42
CSNK1E-206ENST00000413574 POLR3GLQ9BT43 218 aa42.66■■■■■ 4.42
CSNK1E-206ENST00000413574 PLEKHG3A1L390 1219 aa42.65■■■■■ 4.42
CSNK1E-206ENST00000413574 HSPA1LP34931 641 aa42.65■■■■■ 4.42
CSNK1E-206ENST00000413574 CDCA8Q53HL2 280 aa42.64■■■■■ 4.42
CSNK1E-206ENST00000413574 NGDNQ8NEJ9 315 aaKnown RBP42.64■■■■■ 4.42
CSNK1E-206ENST00000413574 TMC1Q8TDI8 760 aa42.64■■■■■ 4.42
CSNK1E-206ENST00000413574 ACEP12821 1306 aa42.64■■■■■ 4.42
CSNK1E-206ENST00000413574 SLC12A5Q9H2X9 1139 aa42.62■■■■■ 4.41
CSNK1E-206ENST00000413574 NPHP3Q7Z494 1330 aa42.61■■■■■ 4.41
CSNK1E-206ENST00000413574 ILDR1Q86SU0 546 aaPredicted RBP42.59■■■■■ 4.41
CSNK1E-206ENST00000413574 POLR3AO14802 1390 aaPredicted RBP42.58■■■■■ 4.41
CSNK1E-206ENST00000413574 COL16A1Q07092 1604 aaPredicted RBP42.58■■■■■ 4.41
CSNK1E-206ENST00000413574 PXDNQ92626 1479 aa42.58■■■■■ 4.41
CSNK1E-206ENST00000413574 MYOM1P52179 1685 aa42.58■■■■■ 4.41
CSNK1E-206ENST00000413574 PSME1Q06323 249 aa42.57■■■■■ 4.41
CSNK1E-206ENST00000413574 KRT28Q7Z3Y7 464 aa42.56■■■■■ 4.4
CSNK1E-206ENST00000413574 SOS2Q07890 1332 aaPredicted RBP42.54■■■■■ 4.4
CSNK1E-206ENST00000413574 KIF7Q2M1P5 1343 aa42.54■■■■■ 4.4
CSNK1E-206ENST00000413574 AKAP12Q02952 1782 aa42.53■■■■■ 4.4
CSNK1E-206ENST00000413574 CD163L1Q9NR16 1453 aa42.52■■■■■ 4.4
CSNK1E-206ENST00000413574 TRPM3Q9HCF6 1732 aaPredicted RBP42.48■■■■■ 4.39
CSNK1E-206ENST00000413574 CPSF1Q10570 1443 aaKnown RBP42.48■■■■■ 4.39
CSNK1E-206ENST00000413574 WASHC2AQ641Q2 1341 aa42.48■■■■■ 4.39
CSNK1E-206ENST00000413574 NINLQ9Y2I6 1382 aa42.47■■■■■ 4.39
CSNK1E-206ENST00000413574 CCDC7Q96M83 1385 aa42.45■■■■■ 4.39
CSNK1E-206ENST00000413574 MON2Q7Z3U7 1717 aa42.44■■■■■ 4.38
CSNK1E-206ENST00000413574 A0A1W2PP64 1363 aa42.44■■■■■ 4.38
CSNK1E-206ENST00000413574 USP6P35125 1406 aa42.43■■■■■ 4.38
CSNK1E-206ENST00000413574 KTN1Q86UP2 1357 aaKnown RBP42.42■■■■■ 4.38
CSNK1E-206ENST00000413574 LRRC59Q96AG4 307 aaKnown RBP42.42■■■■■ 4.38
CSNK1E-206ENST00000413574 TERF2IPQ9NYB0 399 aa42.42■■■■■ 4.38
CSNK1E-206ENST00000413574 PAK3O75914 559 aaPredicted RBP42.41■■■■■ 4.38
CSNK1E-206ENST00000413574 HDGFL2Q7Z4V5 671 aaPredicted RBP42.41■■■■■ 4.38
CSNK1E-206ENST00000413574 ZNF692Q9BU19 519 aaPredicted RBP42.41■■■■■ 4.38
CSNK1E-206ENST00000413574 SBNO1A3KN83 1393 aa42.38■■■■■ 4.37
CSNK1E-206ENST00000413574 SPATA31A3Q5VYP0 1347 aa42.38■■■■■ 4.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms