RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 GJD4Q96KN9 370 aaPredicted RBP8.68□□□□□ -1.02
HMGB3P31-201ENST00000413333 HMX1Q9NP08 348 aaPredicted RBP8.68□□□□□ -1.02
HMGB3P31-201ENST00000413333 SYMPKQ92797 1274 aaKnown RBP8.67□□□□□ -1.02
HMGB3P31-201ENST00000413333 GLMNQ92990 594 aa8.67□□□□□ -1.02
HMGB3P31-201ENST00000413333 MARVELD3Q96A59 401 aa8.67□□□□□ -1.02
HMGB3P31-201ENST00000413333 NBPF3Q9H094 633 aa8.67□□□□□ -1.02
HMGB3P31-201ENST00000413333 FAM205CA6NFA0 338 aa8.66□□□□□ -1.02
HMGB3P31-201ENST00000413333 CFAP99D6REC4 459 aa8.66□□□□□ -1.02
HMGB3P31-201ENST00000413333 ATP6V1AP38606 617 aa8.66□□□□□ -1.02
HMGB3P31-201ENST00000413333 PBX2P40425 430 aa8.66□□□□□ -1.02
HMGB3P31-201ENST00000413333 LRRN4Q8WUT4 740 aa8.66□□□□□ -1.02
HMGB3P31-201ENST00000413333 POTEMA6NI47 508 aa8.65□□□□□ -1.02
HMGB3P31-201ENST00000413333 ST18O60284 1047 aa8.65□□□□□ -1.02
HMGB3P31-201ENST00000413333 LAPTM4BQ86VI4 370 aa8.65□□□□□ -1.02
HMGB3P31-201ENST00000413333 IRF5Q13568 498 aa8.64□□□□□ -1.03
HMGB3P31-201ENST00000413333 KMT5BQ4FZB7 885 aa8.64□□□□□ -1.03
HMGB3P31-201ENST00000413333 ZNF687Q8N1G0 1237 aa8.64□□□□□ -1.03
HMGB3P31-201ENST00000413333 ZFRQ96KR1 1074 aaKnown RBP8.64□□□□□ -1.03
HMGB3P31-201ENST00000413333 TRIM34Q9BYJ4 488 aa8.64□□□□□ -1.03
HMGB3P31-201ENST00000413333 PUS10Q3MIT2 529 aaKnown RBP8.63□□□□□ -1.03
HMGB3P31-201ENST00000413333 PRR7Q8TB68 274 aa8.63□□□□□ -1.03
HMGB3P31-201ENST00000413333 ZBTB7CA1YPR0 619 aa8.62□□□□□ -1.03
HMGB3P31-201ENST00000413333 VAC14Q08AM6 782 aa8.62□□□□□ -1.03
HMGB3P31-201ENST00000413333 WASHC4Q2M389 1173 aa8.62□□□□□ -1.03
HMGB3P31-201ENST00000413333 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
HMGB3P31-201ENST00000413333 POTEGQ6S5H5 508 aa8.62□□□□□ -1.03
HMGB3P31-201ENST00000413333 MRPL50Q8N5N7 158 aaKnown RBP8.62□□□□□ -1.03
HMGB3P31-201ENST00000413333 EPS8L1Q8TE68 723 aa8.62□□□□□ -1.03
HMGB3P31-201ENST00000413333 BHMG1C9JSJ3 638 aaPredicted RBP8.61□□□□□ -1.03
HMGB3P31-201ENST00000413333 NR6A1Q15406 480 aa8.6□□□□□ -1.03
HMGB3P31-201ENST00000413333 LRCH3Q96II8 777 aa8.6□□□□□ -1.03
HMGB3P31-201ENST00000413333 MORN1Q5T089 497 aa8.59□□□□□ -1.03
HMGB3P31-201ENST00000413333 ADAMTS19Q8TE59 1207 aa8.59□□□□□ -1.03
HMGB3P31-201ENST00000413333 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
HMGB3P31-201ENST00000413333 SLC27A5Q9Y2P5 690 aa8.59□□□□□ -1.03
HMGB3P31-201ENST00000413333 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
HMGB3P31-201ENST00000413333 TK2O00142 265 aa8.58□□□□□ -1.04
HMGB3P31-201ENST00000413333 PER1O15534 1290 aaPredicted RBP8.58□□□□□ -1.04
HMGB3P31-201ENST00000413333 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
HMGB3P31-201ENST00000413333 RFX1P22670 979 aa8.58□□□□□ -1.04
HMGB3P31-201ENST00000413333 RETREG3Q86VR2 466 aa8.58□□□□□ -1.04
HMGB3P31-201ENST00000413333 RETREG2Q8NC44 543 aa8.58□□□□□ -1.04
HMGB3P31-201ENST00000413333 NECTIN2Q92692 538 aa8.58□□□□□ -1.04
HMGB3P31-201ENST00000413333 GPR37L1O60883 481 aa8.57□□□□□ -1.04
HMGB3P31-201ENST00000413333 Q3C1V9 767 aa8.57□□□□□ -1.04
HMGB3P31-201ENST00000413333 FAM163AQ96GL9 167 aaPredicted RBP8.57□□□□□ -1.04
HMGB3P31-201ENST00000413333 STAC3Q96MF2 364 aa8.57□□□□□ -1.04
HMGB3P31-201ENST00000413333 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
HMGB3P31-201ENST00000413333 TRAIPQ9BWF2 469 aa8.57□□□□□ -1.04
HMGB3P31-201ENST00000413333 GOLGA8CPA6NN73 597 aa8.56□□□□□ -1.04
HMGB3P31-201ENST00000413333 PPP1R15AO75807 674 aaPredicted RBP8.56□□□□□ -1.04
HMGB3P31-201ENST00000413333 ADGRD1Q6QNK2 874 aa8.56□□□□□ -1.04
HMGB3P31-201ENST00000413333 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
HMGB3P31-201ENST00000413333 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
HMGB3P31-201ENST00000413333 AEBP1Q8IUX7 1158 aa8.55□□□□□ -1.04
HMGB3P31-201ENST00000413333 PPP4CP60510 307 aa8.54□□□□□ -1.04
HMGB3P31-201ENST00000413333 RNF19BQ6ZMZ0 732 aa8.54□□□□□ -1.04
HMGB3P31-201ENST00000413333 PRR14Q9BWN1 585 aa8.54□□□□□ -1.04
HMGB3P31-201ENST00000413333 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.04
HMGB3P31-201ENST00000413333 BLOC1S3Q6QNY0 202 aa8.53□□□□□ -1.04
HMGB3P31-201ENST00000413333 ANKK1Q8NFD2 765 aa8.53□□□□□ -1.04
HMGB3P31-201ENST00000413333 HPS5Q9UPZ3 1129 aa8.53□□□□□ -1.04
HMGB3P31-201ENST00000413333 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.52□□□□□ -1.05
HMGB3P31-201ENST00000413333 SEMA3FQ13275 785 aa8.52□□□□□ -1.05
HMGB3P31-201ENST00000413333 PPP1R12CQ9BZL4 782 aa8.52□□□□□ -1.05
HMGB3P31-201ENST00000413333 ALG2Q9H553 416 aa8.52□□□□□ -1.05
HMGB3P31-201ENST00000413333 BCAMP50895 628 aa8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 CFAP70Q5T0N1 1121 aa8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 LYPD8Q6UX82 237 aa8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 ANKRD13DQ6ZTN6 518 aa8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 KCTD17Q8N5Z5 321 aa8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 PNMA1Q8ND90 353 aa8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 PBXIP1Q96AQ6 731 aa8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 USB1Q9BQ65 265 aaKnown RBP8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 PCDH10Q9P2E7 1040 aa8.51□□□□□ -1.05
HMGB3P31-201ENST00000413333 HRO43593 1189 aa8.5□□□□□ -1.05
HMGB3P31-201ENST00000413333 LMOD1P29536 600 aaPredicted RBP8.5□□□□□ -1.05
HMGB3P31-201ENST00000413333 APLP1P51693 650 aa8.5□□□□□ -1.05
HMGB3P31-201ENST00000413333 PCDHB3Q9Y5E6 796 aa8.5□□□□□ -1.05
HMGB3P31-201ENST00000413333 PALM3A6NDB9 673 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P31-201ENST00000413333 SOWAHBA6NEL2 793 aa8.49□□□□□ -1.05
HMGB3P31-201ENST00000413333 FMNL1O95466 1100 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P31-201ENST00000413333 SOX11P35716 441 aa8.49□□□□□ -1.05
HMGB3P31-201ENST00000413333 BRICD5Q6PL45 260 aa8.49□□□□□ -1.05
HMGB3P31-201ENST00000413333 SCUBE3Q8IX30 993 aa8.49□□□□□ -1.05
HMGB3P31-201ENST00000413333 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
HMGB3P31-201ENST00000413333 EIF4G2P78344 907 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGB3P31-201ENST00000413333 TSR3Q9UJK0 312 aaKnown RBP8.48□□□□□ -1.05
HMGB3P31-201ENST00000413333 NR1I2O75469 434 aa8.47□□□□□ -1.05
HMGB3P31-201ENST00000413333 PDE4CQ08493 712 aa8.47□□□□□ -1.05
HMGB3P31-201ENST00000413333 CDCA8Q53HL2 280 aa8.47□□□□□ -1.05
HMGB3P31-201ENST00000413333 WNT2BQ93097 391 aa8.47□□□□□ -1.05
HMGB3P31-201ENST00000413333 UCN2Q96RP3 112 aa8.47□□□□□ -1.05
HMGB3P31-201ENST00000413333 CSB-PGBD3P0DP91 1061 aa8.46□□□□□ -1.06
HMGB3P31-201ENST00000413333 CTHP32929 405 aa8.46□□□□□ -1.06
HMGB3P31-201ENST00000413333 NR1H3Q13133 447 aa8.46□□□□□ -1.06
HMGB3P31-201ENST00000413333 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
HMGB3P31-201ENST00000413333 CCDC9Q9Y3X0 531 aaKnown RBP8.46□□□□□ -1.06
HMGB3P31-201ENST00000413333 SALL2Q9Y467 1007 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms