RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 PLIN1O60240 522 aa21.71■■□□□ 1.07
HCG18-233ENST00000412685 APAF1O14727 1248 aa21.7■■□□□ 1.06
HCG18-233ENST00000412685 CGNL1Q0VF96 1302 aa21.69■■□□□ 1.06
HCG18-233ENST00000412685 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
HCG18-233ENST00000412685 STK26Q9P289 416 aa21.69■■□□□ 1.06
HCG18-233ENST00000412685 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
HCG18-233ENST00000412685 ANKRD36BQ8N2N9 1353 aa21.68■■□□□ 1.06
HCG18-233ENST00000412685 SAFB2Q14151 953 aaKnown RBP eCLIP21.68■■□□□ 1.061e-6■■■□□ 15.2
HCG18-233ENST00000412685 SLFN5Q08AF3 891 aa21.68■■□□□ 1.06
HCG18-233ENST00000412685 CABP2Q9NPB3 220 aa21.67■■□□□ 1.06
HCG18-233ENST00000412685 TNNT2P45379 298 aaPredicted RBP21.67■■□□□ 1.06
HCG18-233ENST00000412685 PTPRMP28827 1452 aa21.65■■□□□ 1.06
HCG18-233ENST00000412685 TRMT2AQ8IZ69 625 aaKnown RBP21.65■■□□□ 1.06
HCG18-233ENST00000412685 NGEFQ8N5V2 710 aa21.65■■□□□ 1.06
HCG18-233ENST00000412685 STAG3Q9UJ98 1225 aa21.64■■□□□ 1.06
HCG18-233ENST00000412685 YTHDC2Q9H6S0 1430 aaKnown RBP21.64■■□□□ 1.05
HCG18-233ENST00000412685 CLTCQ00610 1675 aaKnown RBP21.63■■□□□ 1.05
HCG18-233ENST00000412685 SHPRHQ149N8 1683 aa21.63■■□□□ 1.05
HCG18-233ENST00000412685 CRBNQ96SW2 442 aa21.63■■□□□ 1.05
HCG18-233ENST00000412685 NSD2O96028 1365 aa21.63■■□□□ 1.05
HCG18-233ENST00000412685 NINLQ9Y2I6 1382 aa21.63■■□□□ 1.05
HCG18-233ENST00000412685 MSH5O43196 834 aa21.62■■□□□ 1.05
HCG18-233ENST00000412685 SRPK2P78362 688 aaKnown RBP21.61■■□□□ 1.05
HCG18-233ENST00000412685 PRAM1Q96QH2 718 aa21.61■■□□□ 1.05
HCG18-233ENST00000412685 SPINK5Q9NQ38 1064 aaPredicted RBP21.61■■□□□ 1.05
HCG18-233ENST00000412685 ALKQ9UM73 1620 aa21.61■■□□□ 1.05
HCG18-233ENST00000412685 MTHFSP49914 203 aa21.6■■□□□ 1.05
HCG18-233ENST00000412685 C20orf194Q5TEA3 1177 aa21.6■■□□□ 1.05
HCG18-233ENST00000412685 E9PSI1 815 aa21.59■■□□□ 1.05
HCG18-233ENST00000412685 POGKQ9P215 609 aa21.59■■□□□ 1.05
HCG18-233ENST00000412685 SPATA31D1Q6ZQQ2 1576 aa21.59■■□□□ 1.05
HCG18-233ENST00000412685 NKTRP30414 1462 aaKnown RBP21.59■■□□□ 1.05
HCG18-233ENST00000412685 MINK1Q8N4C8 1332 aaPredicted RBP21.59■■□□□ 1.05
HCG18-233ENST00000412685 A0A1W2PP64 1363 aa21.58■■□□□ 1.05
HCG18-233ENST00000412685 ATAD2Q6PL18 1390 aa21.58■■□□□ 1.05
HCG18-233ENST00000412685 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.04
HCG18-233ENST00000412685 MLECQ14165 292 aa21.57■■□□□ 1.04
HCG18-233ENST00000412685 CFAP53Q96M91 514 aa21.57■■□□□ 1.04
HCG18-233ENST00000412685 ABCC11Q96J66 1382 aa21.57■■□□□ 1.04
HCG18-233ENST00000412685 ARHGEF40Q8TER5 1519 aa21.56■■□□□ 1.04
HCG18-233ENST00000412685 DMRT2Q9Y5R5 561 aa21.56■■□□□ 1.04
HCG18-233ENST00000412685 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.56■■□□□ 1.04
HCG18-233ENST00000412685 RUNDC1Q96C34 613 aa21.55■■□□□ 1.04
HCG18-233ENST00000412685 WWC1Q8IX03 1113 aa21.55■■□□□ 1.04
HCG18-233ENST00000412685 RIMS2Q9UQ26 1411 aa21.53■■□□□ 1.04
HCG18-233ENST00000412685 KIF13AQ9H1H9 1805 aa21.53■■□□□ 1.04
HCG18-233ENST00000412685 TERF2IPQ9NYB0 399 aa21.53■■□□□ 1.04
HCG18-233ENST00000412685 IQSEC2Q5JU85 1478 aa21.52■■□□□ 1.04
HCG18-233ENST00000412685 TCERG1O14776 1098 aaKnown RBP21.52■■□□□ 1.04
HCG18-233ENST00000412685 TCP11L2Q8N4U5 519 aa21.51■■□□□ 1.03
HCG18-233ENST00000412685 CD163L1Q9NR16 1453 aa21.51■■□□□ 1.03
HCG18-233ENST00000412685 CDK19Q9BWU1 502 aa21.49■■□□□ 1.03
HCG18-233ENST00000412685 BCL11AQ9H165 835 aa21.49■■□□□ 1.03
HCG18-233ENST00000412685 GGNBP2Q9H3C7 697 aa21.49■■□□□ 1.03
HCG18-233ENST00000412685 RRP7AQ9Y3A4 280 aaKnown RBP21.49■■□□□ 1.03
HCG18-233ENST00000412685 DLC1Q96QB1 1528 aa21.49■■□□□ 1.03
HCG18-233ENST00000412685 NEUROD2Q15784 382 aa21.48■■□□□ 1.03
HCG18-233ENST00000412685 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
HCG18-233ENST00000412685 SETD1AO15047 1707 aaKnown RBP21.47■■□□□ 1.03
HCG18-233ENST00000412685 BCAR3O75815 825 aa21.47■■□□□ 1.03
HCG18-233ENST00000412685 FYB1O15117 783 aa21.46■■□□□ 1.03
HCG18-233ENST00000412685 MED14O60244 1454 aa21.46■■□□□ 1.03
HCG18-233ENST00000412685 ESF1Q9H501 851 aaKnown RBP21.46■■□□□ 1.03
HCG18-233ENST00000412685 ZMYM3Q14202 1370 aa21.46■■□□□ 1.03
HCG18-233ENST00000412685 U2AF1L5P0DN76 240 aaPredicted RBP21.46■■□□□ 1.03
HCG18-233ENST00000412685 U2AF1Q01081 240 aaKnown RBP eCLIP21.46■■□□□ 1.03
HCG18-233ENST00000412685 NLRP1Q9C000 1473 aa21.46■■□□□ 1.03
HCG18-233ENST00000412685 HDGFL2Q7Z4V5 671 aaPredicted RBP21.45■■□□□ 1.03
HCG18-233ENST00000412685 ANKRD26Q9UPS8 1709 aa21.45■■□□□ 1.02
HCG18-233ENST00000412685 MS4A1P11836 297 aa21.44■■□□□ 1.02
HCG18-233ENST00000412685 WAPLQ7Z5K2 1190 aa21.44■■□□□ 1.02
HCG18-233ENST00000412685 KDM2BQ8NHM5 1336 aa21.44■■□□□ 1.02
HCG18-233ENST00000412685 CCDC27Q2M243 656 aa21.44■■□□□ 1.02
HCG18-233ENST00000412685 CABP1Q9NZU7 370 aa21.44■■□□□ 1.02
HCG18-233ENST00000412685 WDR63Q8IWG1 891 aa21.43■■□□□ 1.02
HCG18-233ENST00000412685 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.43■■□□□ 1.02
HCG18-233ENST00000412685 ERICH6Q7L0X2 663 aa21.42■■□□□ 1.02
HCG18-233ENST00000412685 NCBP3Q53F19 620 aaKnown RBP21.42■■□□□ 1.02
HCG18-233ENST00000412685 NRXN3Q9Y4C0 1643 aa21.41■■□□□ 1.02
HCG18-233ENST00000412685 COL3A1P02461 1466 aaPredicted RBP21.41■■□□□ 1.02
HCG18-233ENST00000412685 CENPQQ7L2Z9 268 aaPredicted RBP21.41■■□□□ 1.02
HCG18-233ENST00000412685 ADGRB2O60241 1585 aa21.4■■□□□ 1.02
HCG18-233ENST00000412685 ANP32AP39687 249 aaKnown RBP21.4■■□□□ 1.02
HCG18-233ENST00000412685 PDE4AP27815 886 aa21.39■■□□□ 1.01
HCG18-233ENST00000412685 METP08581 1390 aa21.38■■□□□ 1.01
HCG18-233ENST00000412685 U2SURPO15042 1029 aaKnown RBP21.38■■□□□ 1.01
HCG18-233ENST00000412685 ATP7BP35670 1465 aa21.37■■□□□ 1.01
HCG18-233ENST00000412685 KIF20BQ96Q89 1820 aa21.37■■□□□ 1.01
HCG18-233ENST00000412685 SKAP1Q86WV1 359 aa21.37■■□□□ 1.01
HCG18-233ENST00000412685 TNRQ92752 1358 aa21.37■■□□□ 1.01
HCG18-233ENST00000412685 PDE3AQ14432 1141 aa21.37■■□□□ 1.01
HCG18-233ENST00000412685 BACH2Q9BYV9 841 aa21.37■■□□□ 1.01
HCG18-233ENST00000412685 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
HCG18-233ENST00000412685 PLEKHF1Q96S99 279 aa21.35■■□□□ 1.01
HCG18-233ENST00000412685 RARSP54136 660 aaKnown RBP21.34■■□□□ 1.01
HCG18-233ENST00000412685 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
HCG18-233ENST00000412685 PNPLA6Q8IY17 1366 aa21.34■■□□□ 1.01
HCG18-233ENST00000412685 CANXP27824 592 aaKnown RBP21.34■■□□□ 1.01
HCG18-233ENST00000412685 WASLO00401 505 aaPredicted RBP21.33■■□□□ 1.01
HCG18-233ENST00000412685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.33■■□□□ 1.011e-6■■■■□ 21.3
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms