RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-208	ENST00000411917	EVC2	Q86UK5	1308 aa		28.2	■■■□□ 2.11
PTPA-208	ENST00000411917	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.2	■■■□□ 2.1
PTPA-208	ENST00000411917	WAPL	Q7Z5K2	1190 aa		28.19	■■■□□ 2.1
PTPA-208	ENST00000411917	DISP3	Q9P2K9	1392 aa		28.19	■■■□□ 2.1
PTPA-208	ENST00000411917	KIF7	Q2M1P5	1343 aa		28.18	■■■□□ 2.1
PTPA-208	ENST00000411917	WASHC2A	Q641Q2	1341 aa		28.18	■■■□□ 2.1
PTPA-208	ENST00000411917	TULP4	Q9NRJ4	1543 aa		28.18	■■■□□ 2.1
PTPA-208	ENST00000411917	C11orf95	C9JLR9	678 aa	Predicted RBP	28.16	■■■□□ 2.1
PTPA-208	ENST00000411917	ADGRL3	Q9HAR2	1447 aa		28.15	■■■□□ 2.1
PTPA-208	ENST00000411917	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.14	■■■□□ 2.1
PTPA-208	ENST00000411917	NINL	Q9Y2I6	1382 aa		28.13	■■■□□ 2.09
PTPA-208	ENST00000411917	CDC42BPG	Q6DT37	1551 aa		28.13	■■■□□ 2.09
PTPA-208	ENST00000411917	STRCP1	A6NGW2	1772 aa		28.13	■■■□□ 2.09
PTPA-208	ENST00000411917	ATAD2	Q6PL18	1390 aa		28.11	■■■□□ 2.09
PTPA-208	ENST00000411917	DCC	P43146	1447 aa		28.11	■■■□□ 2.09
PTPA-208	ENST00000411917	WASL	O00401	505 aa	Predicted RBP	28.11	■■■□□ 2.09
PTPA-208	ENST00000411917	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.1	■■■□□ 2.09
PTPA-208	ENST00000411917	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.08	■■■□□ 2.09
PTPA-208	ENST00000411917	PROSER2	Q86WR7	435 aa	Predicted RBP	28.07	■■■□□ 2.08
PTPA-208	ENST00000411917	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.07	■■■□□ 2.08
PTPA-208	ENST00000411917	LRRC7	Q96NW7	1537 aa		28.07	■■■□□ 2.08
PTPA-208	ENST00000411917	ANKAR	Q7Z5J8	1434 aa		28.06	■■■□□ 2.08
PTPA-208	ENST00000411917	TMEM94	Q12767	1356 aa		28.05	■■■□□ 2.08
PTPA-208	ENST00000411917	NALCN	Q8IZF0	1738 aa		28.05	■■■□□ 2.08
PTPA-208	ENST00000411917	CDK19	Q9BWU1	502 aa		28.04	■■■□□ 2.08
PTPA-208	ENST00000411917	C19orf44	Q9H6X5	657 aa		28.03	■■■□□ 2.08
PTPA-208	ENST00000411917	LTBP4	Q8N2S1	1624 aa		28.02	■■■□□ 2.08
PTPA-208	ENST00000411917	ATP7B	P35670	1465 aa		28	■■■□□ 2.07
PTPA-208	ENST00000411917	SRPK2	P78362	688 aa	Known RBP	27.99	■■■□□ 2.07
PTPA-208	ENST00000411917	FMN2	Q9NZ56	1722 aa		27.98	■■■□□ 2.07
PTPA-208	ENST00000411917	MYOM1	P52179	1685 aa		27.98	■■■□□ 2.07
PTPA-208	ENST00000411917	CABP2	Q9NPB3	220 aa		27.96	■■■□□ 2.07
PTPA-208	ENST00000411917	CCDC61	Q9Y6R9	512 aa		27.96	■■■□□ 2.07
PTPA-208	ENST00000411917	TOPAZ1	Q8N9V7	1692 aa		27.95	■■■□□ 2.07
PTPA-208	ENST00000411917	MSH6	P52701	1360 aa		27.95	■■■□□ 2.06
PTPA-208	ENST00000411917	XIRP1	Q702N8	1843 aa	Known RBP	27.94	■■■□□ 2.06
PTPA-208	ENST00000411917	NUDT16	Q96DE0	195 aa	Known RBP	27.93	■■■□□ 2.06
PTPA-208	ENST00000411917	CADPS2	Q86UW7	1296 aa		27.92	■■■□□ 2.06
PTPA-208	ENST00000411917	ANKRD36B	Q8N2N9	1353 aa		27.91	■■■□□ 2.06
PTPA-208	ENST00000411917	PLEKHG3	A1L390	1219 aa		27.91	■■■□□ 2.06
PTPA-208	ENST00000411917	ITSN1	Q15811	1721 aa		27.91	■■■□□ 2.06
PTPA-208	ENST00000411917	USP32	Q8NFA0	1604 aa		27.91	■■■□□ 2.06
PTPA-208	ENST00000411917	PRR36	Q9H6K5	1346 aa		27.91	■■■□□ 2.06
PTPA-208	ENST00000411917	IQSEC2	Q5JU85	1478 aa		27.9	■■■□□ 2.06
PTPA-208	ENST00000411917	DDX10	Q13206	875 aa	Known RBP	27.9	■■■□□ 2.06
PTPA-208	ENST00000411917	C14orf37	Q86TY3	774 aa		27.9	■■■□□ 2.06
PTPA-208	ENST00000411917	PPIP5K1	Q6PFW1	1433 aa		27.88	■■■□□ 2.05
PTPA-208	ENST00000411917	MST1R	Q04912	1400 aa		27.86	■■■□□ 2.05
PTPA-208	ENST00000411917	CPSF1	Q10570	1443 aa	Known RBP	27.86	■■■□□ 2.05
PTPA-208	ENST00000411917	ATF3	P18847	181 aa		27.86	■■■□□ 2.05
PTPA-208	ENST00000411917	POLR3GL	Q9BT43	218 aa		27.86	■■■□□ 2.05
PTPA-208	ENST00000411917	CD163L1	Q9NR16	1453 aa		27.85	■■■□□ 2.05
PTPA-208	ENST00000411917	TERF2IP	Q9NYB0	399 aa		27.85	■■■□□ 2.05
PTPA-208	ENST00000411917	POLR3A	O14802	1390 aa	Predicted RBP	27.85	■■■□□ 2.05
PTPA-208	ENST00000411917	C1orf167	Q5SNV9	1468 aa		27.84	■■■□□ 2.05
PTPA-208	ENST00000411917	RBM33	Q96EV2	1170 aa	Known RBP	27.84	■■■□□ 2.05
PTPA-208	ENST00000411917	SLC12A5	Q9H2X9	1139 aa		27.84	■■■□□ 2.05
PTPA-208	ENST00000411917	PER1	O15534	1290 aa	Predicted RBP	27.83	■■■□□ 2.05
PTPA-208	ENST00000411917	ZNF692	Q9BU19	519 aa	Predicted RBP	27.83	■■■□□ 2.05
PTPA-208	ENST00000411917	BRD4	O60885	1362 aa	Predicted RBP	27.83	■■■□□ 2.05
PTPA-208	ENST00000411917	NPC1L1	Q9UHC9	1359 aa		27.83	■■■□□ 2.05
PTPA-208	ENST00000411917	PANK3	Q9H999	370 aa		27.82	■■■□□ 2.04
PTPA-208	ENST00000411917	CABP1	Q9NZU7	370 aa		27.82	■■■□□ 2.04
PTPA-208	ENST00000411917	TMC1	Q8TDI8	760 aa		27.81	■■■□□ 2.04
PTPA-208	ENST00000411917	DIEXF	Q68CQ4	756 aa	Known RBP	27.8	■■■□□ 2.04
PTPA-208	ENST00000411917	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.8	■■■□□ 2.04
PTPA-208	ENST00000411917		A0A1W2PP64	1363 aa		27.8	■■■□□ 2.04
PTPA-208	ENST00000411917	KIF1A	Q12756	1690 aa		27.79	■■■□□ 2.04
PTPA-208	ENST00000411917	EDC4	Q6P2E9	1401 aa	Known RBP	27.75	■■■□□ 2.03
PTPA-208	ENST00000411917	KTN1	Q86UP2	1357 aa	Known RBP	27.75	■■■□□ 2.03
PTPA-208	ENST00000411917	AKAP12	Q02952	1782 aa		27.75	■■■□□ 2.03
PTPA-208	ENST00000411917	PHF8	Q9UPP1	1060 aa		27.74	■■■□□ 2.03
PTPA-208	ENST00000411917	MON2	Q7Z3U7	1717 aa		27.74	■■■□□ 2.03
PTPA-208	ENST00000411917	NSD2	O96028	1365 aa		27.73	■■■□□ 2.03
PTPA-208	ENST00000411917	CARD14	Q9BXL6	1004 aa		27.73	■■■□□ 2.03
PTPA-208	ENST00000411917	KNSTRN	Q9Y448	316 aa		27.73	■■■□□ 2.03
PTPA-208	ENST00000411917	ACE	P12821	1306 aa		27.72	■■■□□ 2.03
PTPA-208	ENST00000411917	USP6	P35125	1406 aa		27.72	■■■□□ 2.03
PTPA-208	ENST00000411917	SSH2	Q76I76	1423 aa		27.72	■■■□□ 2.03
PTPA-208	ENST00000411917	NSD3	Q9BZ95	1437 aa		27.71	■■■□□ 2.03
PTPA-208	ENST00000411917	RGPD8	O14715	1765 aa	Predicted RBP	27.71	■■■□□ 2.03
PTPA-208	ENST00000411917	AMER1	Q5JTC6	1135 aa	Predicted RBP	27.7	■■■□□ 2.02
PTPA-208	ENST00000411917	SLAIN2	Q9P270	581 aa		27.7	■■■□□ 2.02
PTPA-208	ENST00000411917	NRK	Q7Z2Y5	1582 aa		27.69	■■■□□ 2.02
PTPA-208	ENST00000411917	NUTM2F	A1L443	756 aa		27.69	■■■□□ 2.02
PTPA-208	ENST00000411917	ESCO1	Q5FWF5	840 aa		27.69	■■■□□ 2.02
PTPA-208	ENST00000411917	CGNL1	Q0VF96	1302 aa		27.68	■■■□□ 2.02
PTPA-208	ENST00000411917	TTC21A	Q8NDW8	1320 aa		27.67	■■■□□ 2.02
PTPA-208	ENST00000411917	NGDN	Q8NEJ9	315 aa	Known RBP	27.66	■■■□□ 2.02
PTPA-208	ENST00000411917	ORAI2	Q96SN7	254 aa		27.64	■■■□□ 2.02
PTPA-208	ENST00000411917	NPHP3	Q7Z494	1330 aa		27.63	■■■□□ 2.01
PTPA-208	ENST00000411917	ANP32C	O43423	234 aa		27.62	■■■□□ 2.01
PTPA-208	ENST00000411917	BRINP3	Q76B58	766 aa		27.62	■■■□□ 2.01
PTPA-208	ENST00000411917	PMFBP1	Q8TBY8	1022 aa		27.62	■■■□□ 2.01
PTPA-208	ENST00000411917	PARD3	Q8TEW0	1356 aa		27.61	■■■□□ 2.01
PTPA-208	ENST00000411917	RALBP1	Q15311	655 aa		27.61	■■■□□ 2.01
PTPA-208	ENST00000411917	TOM1	O60784	492 aa		27.6	■■■□□ 2.01
PTPA-208	ENST00000411917	CERK	Q8TCT0	537 aa		27.6	■■■□□ 2.01
PTPA-208	ENST00000411917	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.6	■■■□□ 2.01
PTPA-208	ENST00000411917	TTC21B	Q7Z4L5	1316 aa		27.6	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms