RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 DLC1Q96QB1 1528 aa4.63□□□□□ -1.67
RGPD3-202ENST00000409886 PNPLA6Q8IY17 1366 aa4.63□□□□□ -1.67
RGPD3-202ENST00000409886 SHANK3Q9BYB0 1731 aa4.63□□□□□ -1.67
RGPD3-202ENST00000409886 PLCH1Q4KWH8 1693 aa4.63□□□□□ -1.67
RGPD3-202ENST00000409886 IQGAP3Q86VI3 1631 aa4.63□□□□□ -1.67
RGPD3-202ENST00000409886 THSD7AQ9UPZ6 1657 aa4.63□□□□□ -1.67
RGPD3-202ENST00000409886 QSER1Q2KHR3 1735 aa4.63□□□□□ -1.67
RGPD3-202ENST00000409886 NRAPQ86VF7 1730 aa4.63□□□□□ -1.67
RGPD3-202ENST00000409886 FKBP8Q14318 412 aa4.62□□□□□ -1.67
RGPD3-202ENST00000409886 PRAG1Q86YV5 1406 aa4.62□□□□□ -1.67
RGPD3-202ENST00000409886 TRPC5Q9UL62 973 aaPredicted RBP4.62□□□□□ -1.67
RGPD3-202ENST00000409886 ABCA3Q99758 1704 aa4.61□□□□□ -1.67
RGPD3-202ENST00000409886 ZFHX4Q86UP3 3567 aa4.61□□□□□ -1.67
RGPD3-202ENST00000409886 CENPBP07199 599 aaPredicted RBP4.61□□□□□ -1.67
RGPD3-202ENST00000409886 APLP2Q06481 763 aa4.61□□□□□ -1.67
RGPD3-202ENST00000409886 KIAA1210Q9ULL0 1709 aa4.61□□□□□ -1.67
RGPD3-202ENST00000409886 CAMTA1Q9Y6Y1 1673 aa4.61□□□□□ -1.67
RGPD3-202ENST00000409886 MYOM2P54296 1465 aa4.61□□□□□ -1.67
RGPD3-202ENST00000409886 ABCC5O15440 1437 aa4.61□□□□□ -1.67
RGPD3-202ENST00000409886 FNBP4Q8N3X1 1017 aaPredicted RBP4.61□□□□□ -1.67
RGPD3-202ENST00000409886 MAP3K5Q99683 1374 aa4.6□□□□□ -1.67
RGPD3-202ENST00000409886 SPAG9O60271 1321 aaKnown RBP4.6□□□□□ -1.67
RGPD3-202ENST00000409886 PRELPP51888 382 aa4.6□□□□□ -1.67
RGPD3-202ENST00000409886 SLAIN2Q9P270 581 aa4.6□□□□□ -1.67
RGPD3-202ENST00000409886 EEA1Q15075 1411 aa4.6□□□□□ -1.67
RGPD3-202ENST00000409886 TMEM2Q9UHN6 1383 aa4.6□□□□□ -1.67
RGPD3-202ENST00000409886 QTRT2Q9H974 415 aaKnown RBP4.6□□□□□ -1.67
RGPD3-202ENST00000409886 KIF1AQ12756 1690 aa4.6□□□□□ -1.67
RGPD3-202ENST00000409886 AFAP1Q8N556 730 aa4.6□□□□□ -1.67
RGPD3-202ENST00000409886 PLEKHG1Q9ULL1 1385 aa4.6□□□□□ -1.67
RGPD3-202ENST00000409886 NUTM2BA6NNL0 878 aaPredicted RBP4.6□□□□□ -1.67
RGPD3-202ENST00000409886 NUTM2EB1AL46 878 aaPredicted RBP4.6□□□□□ -1.67
RGPD3-202ENST00000409886 NUTM2DQ5VT03 806 aaPredicted RBP4.6□□□□□ -1.67
RGPD3-202ENST00000409886 NUTM2AQ8IVF1 878 aaPredicted RBP4.6□□□□□ -1.67
RGPD3-202ENST00000409886 DDX10Q13206 875 aaKnown RBP4.59□□□□□ -1.67
RGPD3-202ENST00000409886 CEP162Q5TB80 1403 aa4.59□□□□□ -1.67
RGPD3-202ENST00000409886 DHX57Q6P158 1386 aaKnown RBP4.59□□□□□ -1.67
RGPD3-202ENST00000409886 VPS13AQ96RL7 3174 aa4.58□□□□□ -1.68
RGPD3-202ENST00000409886 MYOM1P52179 1685 aa4.58□□□□□ -1.68
RGPD3-202ENST00000409886 SLIT2O94813 1529 aa4.58□□□□□ -1.68
RGPD3-202ENST00000409886 MST1RQ04912 1400 aa4.58□□□□□ -1.68
RGPD3-202ENST00000409886 MBD5Q9P267 1494 aa4.58□□□□□ -1.68
RGPD3-202ENST00000409886 GCC2Q8IWJ2 1684 aa4.58□□□□□ -1.68
RGPD3-202ENST00000409886 NRKQ7Z2Y5 1582 aa4.57□□□□□ -1.68
RGPD3-202ENST00000409886 CCDC141Q6ZP82 1450 aa4.57□□□□□ -1.68
RGPD3-202ENST00000409886 CADPS2Q86UW7 1296 aa4.57□□□□□ -1.68
RGPD3-202ENST00000409886 EID1Q9Y6B2 187 aa4.57□□□□□ -1.68
RGPD3-202ENST00000409886 WDR90Q96KV7 1748 aa4.57□□□□□ -1.68
RGPD3-202ENST00000409886 SF3B2Q13435 895 aaKnown RBP4.57□□□□□ -1.68
RGPD3-202ENST00000409886 ZNF784Q8NCA9 323 aaPredicted RBP4.57□□□□□ -1.68
RGPD3-202ENST00000409886 ZFYVE9O95405 1425 aa4.57□□□□□ -1.68
RGPD3-202ENST00000409886 LRRC59Q96AG4 307 aaKnown RBP4.57□□□□□ -1.68
RGPD3-202ENST00000409886 CASKIN1Q8WXD9 1431 aa4.56□□□□□ -1.68
RGPD3-202ENST00000409886 BAG6P46379 1132 aa4.56□□□□□ -1.68
RGPD3-202ENST00000409886 DUOX2Q9NRD8 1548 aa4.56□□□□□ -1.68
RGPD3-202ENST00000409886 COL14A1Q05707 1796 aaKnown RBP4.55□□□□□ -1.68
RGPD3-202ENST00000409886 B4GALNT3Q6L9W6 998 aa4.55□□□□□ -1.68
RGPD3-202ENST00000409886 ONECUT3O60422 494 aaPredicted RBP4.55□□□□□ -1.68
RGPD3-202ENST00000409886 RSPH4AQ5TD94 716 aa4.55□□□□□ -1.68
RGPD3-202ENST00000409886 PROSER2Q86WR7 435 aaPredicted RBP4.55□□□□□ -1.68
RGPD3-202ENST00000409886 RRBP1Q9P2E9 1410 aaKnown RBP4.54□□□□□ -1.68
RGPD3-202ENST00000409886 PPP1R15AO75807 674 aaPredicted RBP4.54□□□□□ -1.68
RGPD3-202ENST00000409886 CDC42BPGQ6DT37 1551 aa4.54□□□□□ -1.68
RGPD3-202ENST00000409886 ARHGEF28Q8N1W1 1705 aaKnown RBP4.54□□□□□ -1.68
RGPD3-202ENST00000409886 MTUS2Q5JR59 1369 aa4.54□□□□□ -1.68
RGPD3-202ENST00000409886 ERBINQ96RT1 1412 aa4.53□□□□□ -1.68
RGPD3-202ENST00000409886 CICQ96RK0 1608 aaPredicted RBP4.53□□□□□ -1.68
RGPD3-202ENST00000409886 GIGYF1O75420 1035 aaPredicted RBP4.53□□□□□ -1.68
RGPD3-202ENST00000409886 NBR1Q14596 966 aa4.53□□□□□ -1.68
RGPD3-202ENST00000409886 NOS1P29475 1434 aa4.53□□□□□ -1.68
RGPD3-202ENST00000409886 ADGRL3Q9HAR2 1447 aa4.53□□□□□ -1.68
RGPD3-202ENST00000409886 MYO5BQ9ULV0 1848 aa4.53□□□□□ -1.68
RGPD3-202ENST00000409886 ADGRL2O95490 1459 aa4.53□□□□□ -1.68
RGPD3-202ENST00000409886 NRXN3Q9Y4C0 1643 aa4.53□□□□□ -1.68
RGPD3-202ENST00000409886 CRYBG1Q9Y4K1 1723 aa4.53□□□□□ -1.68
RGPD3-202ENST00000409886 DEKP35659 375 aaKnown RBP4.53□□□□□ -1.68
RGPD3-202ENST00000409886 USP21Q9UK80 565 aa4.53□□□□□ -1.68
RGPD3-202ENST00000409886 C19orf44Q9H6X5 657 aa4.52□□□□□ -1.69
RGPD3-202ENST00000409886 PXDNQ92626 1479 aa4.52□□□□□ -1.69
RGPD3-202ENST00000409886 WNK3Q9BYP7 1800 aa4.52□□□□□ -1.69
RGPD3-202ENST00000409886 BRINP3Q76B58 766 aa4.52□□□□□ -1.69
RGPD3-202ENST00000409886 MYT1LQ9UL68 1186 aa4.52□□□□□ -1.69
RGPD3-202ENST00000409886 TXNDC2Q86VQ3 553 aa4.51□□□□□ -1.69
RGPD3-202ENST00000409886 DCAF11Q8TEB1 546 aa4.51□□□□□ -1.69
RGPD3-202ENST00000409886 SOS2Q07890 1332 aaPredicted RBP4.51□□□□□ -1.69
RGPD3-202ENST00000409886 GJD4Q96KN9 370 aaPredicted RBP4.51□□□□□ -1.69
RGPD3-202ENST00000409886 BRPF3Q9ULD4 1205 aa4.51□□□□□ -1.69
RGPD3-202ENST00000409886 TBX22Q9Y458 520 aa4.51□□□□□ -1.69
RGPD3-202ENST00000409886 PARP4Q9UKK3 1724 aaKnown RBP4.51□□□□□ -1.69
RGPD3-202ENST00000409886 KNDC1Q76NI1 1749 aa4.51□□□□□ -1.69
RGPD3-202ENST00000409886 PEAK1Q9H792 1746 aa4.51□□□□□ -1.69
RGPD3-202ENST00000409886 LTKP29376 864 aa4.51□□□□□ -1.69
RGPD3-202ENST00000409886 ASPMQ8IZT6 3477 aa4.5□□□□□ -1.69
RGPD3-202ENST00000409886 PLEKHG5O94827 1062 aa4.5□□□□□ -1.69
RGPD3-202ENST00000409886 HSPA6P17066 643 aa4.5□□□□□ -1.69
RGPD3-202ENST00000409886 FBXO31Q5XUX0 539 aaPredicted RBP4.5□□□□□ -1.69
RGPD3-202ENST00000409886 ADAMTS13Q76LX8 1427 aa4.5□□□□□ -1.69
RGPD3-202ENST00000409886 WASHC2CQ9Y4E1 1318 aa4.5□□□□□ -1.69
RGPD3-202ENST00000409886 TULP4Q9NRJ4 1543 aa4.5□□□□□ -1.69
RGPD3-202ENST00000409886 ATF3P18847 181 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms