RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 TRPC5Q9UL62 973 aaPredicted RBP25.65■■□□□ 1.7
SCRN1-203ENST00000409570 RPGRIP1LQ68CZ1 1315 aa25.64■■□□□ 1.7
SCRN1-203ENST00000409570 ATRNO75882 1429 aa25.64■■□□□ 1.7
SCRN1-203ENST00000409570 RRBP1Q9P2E9 1410 aaKnown RBP25.64■■□□□ 1.7
SCRN1-203ENST00000409570 EP400Q96L91 3159 aa25.63■■□□□ 1.69
SCRN1-203ENST00000409570 CDC42BPGQ6DT37 1551 aa25.62■■□□□ 1.69
SCRN1-203ENST00000409570 MYOM2P54296 1465 aa25.62■■□□□ 1.69
SCRN1-203ENST00000409570 PXDNQ92626 1479 aa25.6■■□□□ 1.69
SCRN1-203ENST00000409570 NPHP3Q7Z494 1330 aa25.58■■□□□ 1.69
SCRN1-203ENST00000409570 ESCO1Q5FWF5 840 aa25.57■■□□□ 1.68
SCRN1-203ENST00000409570 BCL9LQ86UU0 1499 aa25.57■■□□□ 1.68
SCRN1-203ENST00000409570 SLC4A1APQ9BWU0 796 aaKnown RBP25.54■■□□□ 1.68
SCRN1-203ENST00000409570 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.54■■□□□ 1.68
SCRN1-203ENST00000409570 IFT172Q9UG01 1749 aa25.53■■□□□ 1.68
SCRN1-203ENST00000409570 FOXO3O43524 673 aa25.52■■□□□ 1.68
SCRN1-203ENST00000409570 XPCQ01831 940 aaPredicted RBP25.52■■□□□ 1.68
SCRN1-203ENST00000409570 KNDC1Q76NI1 1749 aa25.51■■□□□ 1.68
SCRN1-203ENST00000409570 ADGRF5Q8IZF2 1346 aa25.51■■□□□ 1.67
SCRN1-203ENST00000409570 TECPR2O15040 1411 aa25.5■■□□□ 1.67
SCRN1-203ENST00000409570 FMN2Q9NZ56 1722 aa25.49■■□□□ 1.67
SCRN1-203ENST00000409570 WAPLQ7Z5K2 1190 aa25.48■■□□□ 1.67
SCRN1-203ENST00000409570 LRPPRCP42704 1394 aaKnown RBP25.47■■□□□ 1.67
SCRN1-203ENST00000409570 GJD4Q96KN9 370 aaPredicted RBP25.47■■□□□ 1.67
SCRN1-203ENST00000409570 STK26Q9P289 416 aa25.47■■□□□ 1.67
SCRN1-203ENST00000409570 ZRANB1Q9UGI0 708 aa25.47■■□□□ 1.67
SCRN1-203ENST00000409570 NUTM2FA1L443 756 aa25.46■■□□□ 1.67
SCRN1-203ENST00000409570 FOXD1Q16676 465 aa25.46■■□□□ 1.67
SCRN1-203ENST00000409570 CCDC125Q86Z20 511 aa25.46■■□□□ 1.67
SCRN1-203ENST00000409570 GLI3P10071 1580 aa25.46■■□□□ 1.67
SCRN1-203ENST00000409570 BRWD3Q6RI45 1802 aa25.46■■□□□ 1.67
SCRN1-203ENST00000409570 RGPD8O14715 1765 aaPredicted RBP25.46■■□□□ 1.67
SCRN1-203ENST00000409570 KIF1AQ12756 1690 aa25.45■■□□□ 1.66
SCRN1-203ENST00000409570 PLEKHH1Q9ULM0 1364 aa25.44■■□□□ 1.66
SCRN1-203ENST00000409570 SPATA31E1Q6ZUB1 1445 aa25.44■■□□□ 1.66
SCRN1-203ENST00000409570 ABCC11Q96J66 1382 aa25.44■■□□□ 1.66
SCRN1-203ENST00000409570 SLIT2O94813 1529 aa25.43■■□□□ 1.66
SCRN1-203ENST00000409570 USP32Q8NFA0 1604 aa25.41■■□□□ 1.66
SCRN1-203ENST00000409570 SPATA31A3Q5VYP0 1347 aa25.41■■□□□ 1.66
SCRN1-203ENST00000409570 CCDC144AA2RUR9 1427 aa25.41■■□□□ 1.66
SCRN1-203ENST00000409570 RGL3Q3MIN7 710 aa25.41■■□□□ 1.66
SCRN1-203ENST00000409570 TMEM132EQ6IEE7 984 aa25.41■■□□□ 1.66
SCRN1-203ENST00000409570 ANKRD30BQ9BXX2 1392 aa25.41■■□□□ 1.66
SCRN1-203ENST00000409570 RALGAPBQ86X10 1494 aa25.4■■□□□ 1.66
SCRN1-203ENST00000409570 UNC5CLQ8IV45 518 aa25.4■■□□□ 1.66
SCRN1-203ENST00000409570 PIK3C2GO75747 1445 aa25.38■■□□□ 1.65
SCRN1-203ENST00000409570 YTHDC2Q9H6S0 1430 aaKnown RBP25.37■■□□□ 1.65
SCRN1-203ENST00000409570 KRT28Q7Z3Y7 464 aa25.35■■□□□ 1.65
SCRN1-203ENST00000409570 BLMP54132 1417 aaPredicted RBP25.35■■□□□ 1.65
SCRN1-203ENST00000409570 PLCH1Q4KWH8 1693 aa25.35■■□□□ 1.65
SCRN1-203ENST00000409570 ABCA3Q99758 1704 aa25.34■■□□□ 1.65
SCRN1-203ENST00000409570 NWD2Q9ULI1 1742 aa25.34■■□□□ 1.65
SCRN1-203ENST00000409570 TNS3Q68CZ2 1445 aa25.31■■□□□ 1.64
SCRN1-203ENST00000409570 SIRT1Q96EB6 747 aa25.31■■□□□ 1.64
SCRN1-203ENST00000409570 MPHOSPH9Q99550 1183 aa25.3■■□□□ 1.64
SCRN1-203ENST00000409570 PHF8Q9UPP1 1060 aa25.29■■□□□ 1.64
SCRN1-203ENST00000409570 DEFB132Q7Z7B7 95 aa25.28■■□□□ 1.64
SCRN1-203ENST00000409570 CABLES1Q8TDN4 633 aa25.28■■□□□ 1.64
SCRN1-203ENST00000409570 VPS72Q15906 364 aa25.27■■□□□ 1.64
SCRN1-203ENST00000409570 SEPT12Q8IYM1 358 aa25.27■■□□□ 1.64
SCRN1-203ENST00000409570 NRXN1Q9ULB1 1477 aa25.27■■□□□ 1.64
SCRN1-203ENST00000409570 PSME1Q06323 249 aa25.26■■□□□ 1.63
SCRN1-203ENST00000409570 C14orf93Q9H972 538 aaKnown RBP25.26■■□□□ 1.63
SCRN1-203ENST00000409570 HAP1P54257 671 aaPredicted RBP25.25■■□□□ 1.63
SCRN1-203ENST00000409570 SBNO1A3KN83 1393 aa25.25■■□□□ 1.63
SCRN1-203ENST00000409570 ONECUT3O60422 494 aaPredicted RBP25.24■■□□□ 1.63
SCRN1-203ENST00000409570 NRAPQ86VF7 1730 aa25.23■■□□□ 1.63
SCRN1-203ENST00000409570 PLEKHG5O94827 1062 aa25.22■■□□□ 1.63
SCRN1-203ENST00000409570 DHX57Q6P158 1386 aaKnown RBP25.21■■□□□ 1.63
SCRN1-203ENST00000409570 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
SCRN1-203ENST00000409570 TRPM3Q9HCF6 1732 aaPredicted RBP25.2■■□□□ 1.63
SCRN1-203ENST00000409570 ARHGEF10O15013 1369 aa25.2■■□□□ 1.63
SCRN1-203ENST00000409570 SF3B2Q13435 895 aaKnown RBP25.2■■□□□ 1.62
SCRN1-203ENST00000409570 LRP5O75197 1615 aa25.19■■□□□ 1.62
SCRN1-203ENST00000409570 LMOD2Q6P5Q4 547 aa25.19■■□□□ 1.62
SCRN1-203ENST00000409570 KRT27Q7Z3Y8 459 aa25.19■■□□□ 1.62
SCRN1-203ENST00000409570 CCDC9Q9Y3X0 531 aaKnown RBP25.19■■□□□ 1.62
SCRN1-203ENST00000409570 SAFB2Q14151 953 aaKnown RBP eCLIP25.18■■□□□ 1.62
SCRN1-203ENST00000409570 PRAM1Q96QH2 718 aa25.18■■□□□ 1.62
SCRN1-203ENST00000409570 DLC1Q96QB1 1528 aa25.17■■□□□ 1.62
SCRN1-203ENST00000409570 FAM83GA6ND36 823 aa25.17■■□□□ 1.62
SCRN1-203ENST00000409570 ADGRB2O60241 1585 aa25.17■■□□□ 1.62
SCRN1-203ENST00000409570 ALS2Q96Q42 1657 aa25.17■■□□□ 1.62
SCRN1-203ENST00000409570 ANKARQ7Z5J8 1434 aa25.16■■□□□ 1.62
SCRN1-203ENST00000409570 PMFBP1Q8TBY8 1022 aa25.16■■□□□ 1.62
SCRN1-203ENST00000409570 COL14A1Q05707 1796 aaKnown RBP25.13■■□□□ 1.61
SCRN1-203ENST00000409570 CRYBG1Q9Y4K1 1723 aa25.12■■□□□ 1.61
SCRN1-203ENST00000409570 POGKQ9P215 609 aa25.11■■□□□ 1.61
SCRN1-203ENST00000409570 ADGRB1O14514 1584 aa25.1■■□□□ 1.61
SCRN1-203ENST00000409570 RGPD1P0DJD0 1748 aa25.1■■□□□ 1.61
SCRN1-203ENST00000409570 A0A0G2JS52 829 aa25.09■■□□□ 1.61
SCRN1-203ENST00000409570 MYT1Q01538 1121 aa25.09■■□□□ 1.61
SCRN1-203ENST00000409570 FAM98CQ17RN3 349 aaKnown RBP25.09■■□□□ 1.61
SCRN1-203ENST00000409570 BTG4Q9NY30 223 aa25.09■■□□□ 1.61
SCRN1-203ENST00000409570 BAG6P46379 1132 aa25.08■■□□□ 1.61
SCRN1-203ENST00000409570 PSDA5PKW4 1024 aaPredicted RBP25.06■■□□□ 1.6
SCRN1-203ENST00000409570 PRR36Q9H6K5 1346 aa25.06■■□□□ 1.6
SCRN1-203ENST00000409570 HIRIP3Q9BW71 556 aaPredicted RBP25.05■■□□□ 1.6
SCRN1-203ENST00000409570 TULP4Q9NRJ4 1543 aa25.05■■□□□ 1.6
SCRN1-203ENST00000409570 THSD7AQ9UPZ6 1657 aa25.04■■□□□ 1.6
SCRN1-203ENST00000409570 TNS1Q9HBL0 1735 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms