RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 PMFBP1Q8TBY8 1022 aa21.47■■□□□ 1.03
SYNC-202ENST00000409190 ABCC1P33527 1531 aa21.46■■□□□ 1.03
SYNC-202ENST00000409190 IQGAP1P46940 1657 aa21.46■■□□□ 1.03
SYNC-202ENST00000409190 TRPM2O94759 1503 aa21.45■■□□□ 1.02
SYNC-202ENST00000409190 SRPK2P78362 688 aaKnown RBP21.45■■□□□ 1.02
SYNC-202ENST00000409190 EXOSC9Q06265 439 aaKnown RBP21.45■■□□□ 1.02
SYNC-202ENST00000409190 TBC1D2Q9BYX2 928 aa21.45■■□□□ 1.02
SYNC-202ENST00000409190 RWDD1Q9H446 243 aaPredicted RBP21.45■■□□□ 1.02
SYNC-202ENST00000409190 FBLN1P23142 703 aa21.44■■□□□ 1.02
SYNC-202ENST00000409190 NPC1L1Q9UHC9 1359 aa21.44■■□□□ 1.02
SYNC-202ENST00000409190 PTPRTO14522 1441 aa21.43■■□□□ 1.02
SYNC-202ENST00000409190 STAC3Q96MF2 364 aa21.43■■□□□ 1.02
SYNC-202ENST00000409190 FANCAO15360 1455 aa21.42■■□□□ 1.02
SYNC-202ENST00000409190 POLR3AO14802 1390 aaPredicted RBP21.41■■□□□ 1.02
SYNC-202ENST00000409190 DZIP1LQ8IYY4 767 aaKnown RBP21.41■■□□□ 1.02
SYNC-202ENST00000409190 KDM5AP29375 1690 aaKnown RBP21.41■■□□□ 1.02
SYNC-202ENST00000409190 ZKSCAN2Q63HK3 967 aa21.41■■□□□ 1.02
SYNC-202ENST00000409190 MYH16Q9H6N6 1097 aa21.41■■□□□ 1.02
SYNC-202ENST00000409190 MYOM1P52179 1685 aa21.4■■□□□ 1.02
SYNC-202ENST00000409190 MVPQ14764 893 aaKnown RBP21.39■■□□□ 1.01
SYNC-202ENST00000409190 MINK1Q8N4C8 1332 aaPredicted RBP21.38■■□□□ 1.01
SYNC-202ENST00000409190 ZCCHC11Q5TAX3 1644 aaKnown RBP21.38■■□□□ 1.01
SYNC-202ENST00000409190 ZFYVE16Q7Z3T8 1539 aa21.38■■□□□ 1.01
SYNC-202ENST00000409190 FOXD4L1Q9NU39 408 aa21.38■■□□□ 1.01
SYNC-202ENST00000409190 ADGRL1O94910 1474 aa21.38■■□□□ 1.01
SYNC-202ENST00000409190 ELL2O00472 640 aaPredicted RBP21.37■■□□□ 1.01
SYNC-202ENST00000409190 SSH1Q8WYL5 1049 aa21.37■■□□□ 1.01
SYNC-202ENST00000409190 SPHKAPQ2M3C7 1700 aa21.37■■□□□ 1.01
SYNC-202ENST00000409190 TBC1D32Q96NH3 1257 aa21.37■■□□□ 1.01
SYNC-202ENST00000409190 SLC24A1O60721 1099 aa21.37■■□□□ 1.01
SYNC-202ENST00000409190 WDR63Q8IWG1 891 aa21.36■■□□□ 1.01
SYNC-202ENST00000409190 TRIM27P14373 513 aa21.36■■□□□ 1.01
SYNC-202ENST00000409190 NOB1Q9ULX3 412 aaKnown RBP21.36■■□□□ 1.01
SYNC-202ENST00000409190 LNPKQ9C0E8 428 aa21.35■■□□□ 1.01
SYNC-202ENST00000409190 C22orf23Q9BZE7 217 aa21.34■■□□□ 1.01
SYNC-202ENST00000409190 C14orf93Q9H972 538 aaKnown RBP21.34■■□□□ 1.01
SYNC-202ENST00000409190 NGEFQ8N5V2 710 aa21.34■■□□□ 1.01
SYNC-202ENST00000409190 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
SYNC-202ENST00000409190 ABCA6Q8N139 1617 aa21.34■■□□□ 1.01
SYNC-202ENST00000409190 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
SYNC-202ENST00000409190 C1orf115Q9H7X2 142 aa21.33■■□□□ 1.01
SYNC-202ENST00000409190 RIPK4P57078 832 aa21.33■■□□□ 1.01
SYNC-202ENST00000409190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.32■■□□□ 1
SYNC-202ENST00000409190 TMEM57Q8N5G2 664 aa21.32■■□□□ 1
SYNC-202ENST00000409190 THUMPD2Q9BTF0 503 aaKnown RBP21.32■■□□□ 1
SYNC-202ENST00000409190 EVC2Q86UK5 1308 aa21.32■■□□□ 1
SYNC-202ENST00000409190 RTEL1-TNFRSF6BF6WH68 1400 aa21.32■■□□□ 1
SYNC-202ENST00000409190 CEP152O94986 1710 aa21.31■■□□□ 1
SYNC-202ENST00000409190 RAPGEF3O95398 923 aa21.31■■□□□ 1
SYNC-202ENST00000409190 TMPOP42166 694 aaKnown RBP21.31■■□□□ 1
SYNC-202ENST00000409190 PANK2Q9BZ23 570 aa21.3■■□□□ 1
SYNC-202ENST00000409190 ANTXR1Q9H6X2 564 aa21.3■■□□□ 1
SYNC-202ENST00000409190 MAP3K4Q9Y6R4 1608 aa21.28■■□□□ 1
SYNC-202ENST00000409190 NINLQ9Y2I6 1382 aa21.28■■□□□ 1
SYNC-202ENST00000409190 HMOX1P09601 288 aa21.28■■□□□ 1
SYNC-202ENST00000409190 ATF7IPQ6VMQ6 1270 aa21.27■□□□□ 0.99
SYNC-202ENST00000409190 PHF23Q9BUL5 403 aaPredicted RBP21.26■□□□□ 0.99
SYNC-202ENST00000409190 TRIM35Q9UPQ4 493 aa21.26■□□□□ 0.99
SYNC-202ENST00000409190 NPM1P06748 294 aaKnown RBP eCLIP21.25■□□□□ 0.99
SYNC-202ENST00000409190 TET3O43151 1660 aa21.25■□□□□ 0.99
SYNC-202ENST00000409190 HSP90AA1P07900 732 aaKnown RBP21.24■□□□□ 0.99
SYNC-202ENST00000409190 NLRP1Q9C000 1473 aa21.24■□□□□ 0.99
SYNC-202ENST00000409190 MCM4P33991 863 aa21.24■□□□□ 0.99
SYNC-202ENST00000409190 HSCBQ8IWL3 235 aa21.24■□□□□ 0.99
SYNC-202ENST00000409190 PRAM1Q96QH2 718 aa21.23■□□□□ 0.99
SYNC-202ENST00000409190 RRAGDQ9NQL2 400 aaPredicted RBP21.23■□□□□ 0.99
SYNC-202ENST00000409190 DDX19BQ9UMR2 479 aa21.23■□□□□ 0.99
SYNC-202ENST00000409190 GOLGA6L3A6NEY3 463 aa21.22■□□□□ 0.99
SYNC-202ENST00000409190 ANKRD45Q5TZF3 282 aa21.22■□□□□ 0.99
SYNC-202ENST00000409190 NPATQ14207 1427 aa21.22■□□□□ 0.99
SYNC-202ENST00000409190 ZNF518AQ6AHZ1 1483 aa21.22■□□□□ 0.99
SYNC-202ENST00000409190 IDI1Q13907 227 aa21.21■□□□□ 0.99
SYNC-202ENST00000409190 VGFO15240 615 aaPredicted RBP21.21■□□□□ 0.99
SYNC-202ENST00000409190 SHROOM2Q13796 1616 aa21.21■□□□□ 0.99
SYNC-202ENST00000409190 MYOM2P54296 1465 aa21.21■□□□□ 0.99
SYNC-202ENST00000409190 A0A1W2PP64 1363 aa21.2■□□□□ 0.98
SYNC-202ENST00000409190 FYB1O15117 783 aa21.2■□□□□ 0.98
SYNC-202ENST00000409190 XRCC6P12956 609 aaKnown RBP eCLIP21.2■□□□□ 0.98
SYNC-202ENST00000409190 CCDC27Q2M243 656 aa21.2■□□□□ 0.98
SYNC-202ENST00000409190 TRAK2O60296 914 aa21.2■□□□□ 0.98
SYNC-202ENST00000409190 DIAPH1O60610 1272 aaKnown RBP21.2■□□□□ 0.98
SYNC-202ENST00000409190 STAG3Q9UJ98 1225 aa21.2■□□□□ 0.98
SYNC-202ENST00000409190 MROH2AA6NES4 1674 aa21.2■□□□□ 0.98
SYNC-202ENST00000409190 APBB1O00213 710 aa21.19■□□□□ 0.98
SYNC-202ENST00000409190 PRKAR2BP31323 418 aa21.19■□□□□ 0.98
SYNC-202ENST00000409190 CABP1Q9NZU7 370 aa21.19■□□□□ 0.98
SYNC-202ENST00000409190 HSP90AB1P08238 724 aaKnown RBP21.19■□□□□ 0.98
SYNC-202ENST00000409190 FAM43AQ8N2R8 423 aa21.18■□□□□ 0.98
SYNC-202ENST00000409190 CHMP5Q9NZZ3 219 aa21.18■□□□□ 0.98
SYNC-202ENST00000409190 L1TD1Q5T7N2 865 aaKnown RBP21.17■□□□□ 0.98
SYNC-202ENST00000409190 ASXL2Q76L83 1435 aa21.17■□□□□ 0.98
SYNC-202ENST00000409190 SBNO2Q9Y2G9 1366 aa21.17■□□□□ 0.98
SYNC-202ENST00000409190 CD109Q6YHK3 1445 aa21.17■□□□□ 0.98
SYNC-202ENST00000409190 ANKRD36BQ8N2N9 1353 aa21.17■□□□□ 0.98
SYNC-202ENST00000409190 IQSEC2Q5JU85 1478 aa21.17■□□□□ 0.98
SYNC-202ENST00000409190 KIF1BO60333 1816 aa21.17■□□□□ 0.98
SYNC-202ENST00000409190 PLEKHF1Q96S99 279 aa21.17■□□□□ 0.98
SYNC-202ENST00000409190 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
SYNC-202ENST00000409190 TSPYL6Q8N831 410 aa21.15■□□□□ 0.98
SYNC-202ENST00000409190 SHPRHQ149N8 1683 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms