RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 PHF14O94880 888 aa20.15■□□□□ 0.82
CBX6-202ENST00000407418 CPLX1O14810 134 aa20.15■□□□□ 0.82
CBX6-202ENST00000407418 ERC2O15083 957 aa20.15■□□□□ 0.82
CBX6-202ENST00000407418 CABP4P57796 275 aa20.14■□□□□ 0.82
CBX6-202ENST00000407418 TSR1Q2NL82 804 aaKnown RBP20.14■□□□□ 0.81
CBX6-202ENST00000407418 ANO2Q9NQ90 1003 aa20.14■□□□□ 0.81
CBX6-202ENST00000407418 CFTRP13569 1480 aa20.14■□□□□ 0.81
CBX6-202ENST00000407418 FYB1O15117 783 aa20.14■□□□□ 0.81
CBX6-202ENST00000407418 NEUROD6Q96NK8 337 aa20.14■□□□□ 0.81
CBX6-202ENST00000407418 PRAM1Q96QH2 718 aa20.13■□□□□ 0.81
CBX6-202ENST00000407418 FAM177BA6PVY3 158 aa20.13■□□□□ 0.81
CBX6-202ENST00000407418 ZNF692Q9BU19 519 aaPredicted RBP20.13■□□□□ 0.81
CBX6-202ENST00000407418 A0A0U1RQG5 324 aaPredicted RBP20.13■□□□□ 0.81
CBX6-202ENST00000407418 GZF1Q9H116 711 aaPredicted RBP20.13■□□□□ 0.81
CBX6-202ENST00000407418 ATP6V1DQ9Y5K8 247 aa20.12■□□□□ 0.81
CBX6-202ENST00000407418 HECW1Q76N89 1606 aa20.12■□□□□ 0.81
CBX6-202ENST00000407418 PLIN1O60240 522 aa20.12■□□□□ 0.81
CBX6-202ENST00000407418 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
CBX6-202ENST00000407418 APAF1O14727 1248 aa20.11■□□□□ 0.81
CBX6-202ENST00000407418 PRDM11Q9NQV5 511 aa20.11■□□□□ 0.81
CBX6-202ENST00000407418 TOPBP1Q92547 1522 aa20.11■□□□□ 0.81
CBX6-202ENST00000407418 MCTP1Q6DN14 999 aa20.11■□□□□ 0.81
CBX6-202ENST00000407418 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
CBX6-202ENST00000407418 IKQ13123 557 aaPredicted RBP20.1■□□□□ 0.81
CBX6-202ENST00000407418 CCDC30Q5VVM6 783 aa20.1■□□□□ 0.81
CBX6-202ENST00000407418 TBC1D2BQ9UPU7 963 aa20.1■□□□□ 0.81
CBX6-202ENST00000407418 EFCAB5A4FU69 1503 aa20.1■□□□□ 0.81
CBX6-202ENST00000407418 TNNT3P45378 269 aaPredicted RBP20.1■□□□□ 0.81
CBX6-202ENST00000407418 DDX54Q8TDD1 881 aaKnown RBP20.1■□□□□ 0.81
CBX6-202ENST00000407418 GNL3LQ9NVN8 582 aaKnown RBP20.1■□□□□ 0.81
CBX6-202ENST00000407418 SLKQ9H2G2 1235 aaPredicted RBP20.09■□□□□ 0.81
CBX6-202ENST00000407418 WASHC4Q2M389 1173 aa20.09■□□□□ 0.81
CBX6-202ENST00000407418 SLC3A2P08195 630 aaKnown RBP20.08■□□□□ 0.81
CBX6-202ENST00000407418 UBTFL1P0CB47 393 aaPredicted RBP20.08■□□□□ 0.8
CBX6-202ENST00000407418 LRRC9Q6ZRR7 1453 aa20.08■□□□□ 0.8
CBX6-202ENST00000407418 REC8O95072 547 aa20.08■□□□□ 0.8
CBX6-202ENST00000407418 RAPGEF3O95398 923 aa20.08■□□□□ 0.8
CBX6-202ENST00000407418 FOXD4L1Q9NU39 408 aa20.08■□□□□ 0.8
CBX6-202ENST00000407418 EHBP1L1Q8N3D4 1523 aa20.08■□□□□ 0.8
CBX6-202ENST00000407418 TPM1P09493 284 aa20.07■□□□□ 0.8
CBX6-202ENST00000407418 DZIP1LQ8IYY4 767 aaKnown RBP20.07■□□□□ 0.8
CBX6-202ENST00000407418 C9orf84Q5VXU9 1444 aa20.07■□□□□ 0.8
CBX6-202ENST00000407418 GOLGA6L3A6NEY3 463 aa20.06■□□□□ 0.8
CBX6-202ENST00000407418 CENPQQ7L2Z9 268 aaPredicted RBP20.06■□□□□ 0.8
CBX6-202ENST00000407418 PNISRQ8TF01 805 aaKnown RBP20.06■□□□□ 0.8
CBX6-202ENST00000407418 CDK19Q9BWU1 502 aa20.06■□□□□ 0.8
CBX6-202ENST00000407418 RTEL1-TNFRSF6BF6WH68 1400 aa20.06■□□□□ 0.8
CBX6-202ENST00000407418 R3HCC1Q9Y3T6 440 aaKnown RBP20.06■□□□□ 0.8
CBX6-202ENST00000407418 RALYLQ86SE5 291 aaKnown RBP20.06■□□□□ 0.8
CBX6-202ENST00000407418 HOOK1Q9UJC3 728 aaKnown RBP20.06■□□□□ 0.8
CBX6-202ENST00000407418 RPGRIP1LQ68CZ1 1315 aa20.05■□□□□ 0.8
CBX6-202ENST00000407418 BRMS1Q9HCU9 246 aa20.05■□□□□ 0.8
CBX6-202ENST00000407418 HFM1A2PYH4 1435 aa20.05■□□□□ 0.8
CBX6-202ENST00000407418 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
CBX6-202ENST00000407418 SAFBQ15424 915 aaKnown RBP eCLIP20.04■□□□□ 0.8
CBX6-202ENST00000407418 WWC2Q6AWC2 1192 aa20.04■□□□□ 0.8
CBX6-202ENST00000407418 CNNM1Q9NRU3 951 aa20.03■□□□□ 0.8
CBX6-202ENST00000407418 CFAP70Q5T0N1 1121 aa20.03■□□□□ 0.8
CBX6-202ENST00000407418 NINLQ9Y2I6 1382 aa20.03■□□□□ 0.8
CBX6-202ENST00000407418 ANKRD20A12PQ8NF67 263 aa20.02■□□□□ 0.8
CBX6-202ENST00000407418 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.79
CBX6-202ENST00000407418 FOXD4L5Q5VV16 416 aaPredicted RBP20.01■□□□□ 0.79
CBX6-202ENST00000407418 FOXD4L4Q8WXT5 416 aaPredicted RBP20.01■□□□□ 0.79
CBX6-202ENST00000407418 TROQ12816 1431 aaPredicted RBP20.01■□□□□ 0.79
CBX6-202ENST00000407418 XBP1P17861 261 aa20.01■□□□□ 0.79
CBX6-202ENST00000407418 COG6Q9Y2V7 657 aa20.01■□□□□ 0.79
CBX6-202ENST00000407418 CD109Q6YHK3 1445 aa20.01■□□□□ 0.79
CBX6-202ENST00000407418 PCMTD1Q96MG8 357 aaPredicted RBP20■□□□□ 0.79
CBX6-202ENST00000407418 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
CBX6-202ENST00000407418 SART3Q15020 963 aaKnown RBP20■□□□□ 0.79
CBX6-202ENST00000407418 TSHZ2Q9NRE2 1034 aa19.99■□□□□ 0.79
CBX6-202ENST00000407418 POLA1P09884 1462 aaPredicted RBP19.98■□□□□ 0.79
CBX6-202ENST00000407418 TTC39AQ5SRH9 613 aa19.98■□□□□ 0.79
CBX6-202ENST00000407418 ZNF530Q6P9A1 599 aaPredicted RBP19.98■□□□□ 0.79
CBX6-202ENST00000407418 EPRSP07814 1512 aaKnown RBP19.98■□□□□ 0.79
CBX6-202ENST00000407418 PRKRIP1Q9H875 184 aaPredicted RBP19.98■□□□□ 0.79
CBX6-202ENST00000407418 MTHFSP49914 203 aa19.98■□□□□ 0.79
CBX6-202ENST00000407418 ERBINQ96RT1 1412 aa19.98■□□□□ 0.79
CBX6-202ENST00000407418 IPO9Q96P70 1041 aaKnown RBP19.97■□□□□ 0.79
CBX6-202ENST00000407418 LAMC3Q9Y6N6 1575 aa19.97■□□□□ 0.79
CBX6-202ENST00000407418 GOLGA6L19H0YKK7 550 aa19.97■□□□□ 0.79
CBX6-202ENST00000407418 RBM5P52756 815 aaKnown RBP eCLIP19.97■□□□□ 0.79
CBX6-202ENST00000407418 TMEM132AQ24JP5 1023 aa19.97■□□□□ 0.79
CBX6-202ENST00000407418 GNAI3P08754 354 aa19.96■□□□□ 0.79
CBX6-202ENST00000407418 GOLGA6L1Q8N7Z2 621 aa19.96■□□□□ 0.79
CBX6-202ENST00000407418 CCDC158Q5M9N0 1113 aa19.96■□□□□ 0.79
CBX6-202ENST00000407418 ERC1Q8IUD2 1116 aa19.96■□□□□ 0.79
CBX6-202ENST00000407418 KCNH5Q8NCM2 988 aa19.96■□□□□ 0.79
CBX6-202ENST00000407418 CNTLNQ9NXG0 1405 aa19.96■□□□□ 0.79
CBX6-202ENST00000407418 INTS3Q68E01 1043 aaKnown RBP19.95■□□□□ 0.78
CBX6-202ENST00000407418 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
CBX6-202ENST00000407418 MTMR7Q9Y216 660 aa19.94■□□□□ 0.78
CBX6-202ENST00000407418 BECN2A8MW95 431 aa19.94■□□□□ 0.78
CBX6-202ENST00000407418 RRP1P56182 461 aaKnown RBP19.94■□□□□ 0.78
CBX6-202ENST00000407418 CNTROBQ8N137 903 aa19.94■□□□□ 0.78
CBX6-202ENST00000407418 CABP1Q9NZU7 370 aa19.93■□□□□ 0.78
CBX6-202ENST00000407418 LRPPRCP42704 1394 aaKnown RBP19.93■□□□□ 0.78
CBX6-202ENST00000407418 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.93■□□□□ 0.78
CBX6-202ENST00000407418 FSD1Q9BTV5 496 aa19.92■□□□□ 0.78
CBX6-202ENST00000407418 PRKAR2BP31323 418 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms