RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-208ENST00000407417 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
NFIA-208ENST00000407417 GLIPR1L2Q4G1C9 344 aa11.4□□□□□ -0.58
NFIA-208ENST00000407417 IFT172Q9UG01 1749 aa11.4□□□□□ -0.58
NFIA-208ENST00000407417 SETD1AO15047 1707 aaKnown RBP11.39□□□□□ -0.59
NFIA-208ENST00000407417 XRN1Q8IZH2 1706 aaKnown RBP11.39□□□□□ -0.59
NFIA-208ENST00000407417 C14orf37Q86TY3 774 aa11.39□□□□□ -0.59
NFIA-208ENST00000407417 MSH6P52701 1360 aa11.38□□□□□ -0.59
NFIA-208ENST00000407417 HSPA1LP34931 641 aa11.38□□□□□ -0.59
NFIA-208ENST00000407417 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
NFIA-208ENST00000407417 PIK3C2GO75747 1445 aa11.38□□□□□ -0.59
NFIA-208ENST00000407417 TMEM132EQ6IEE7 984 aa11.37□□□□□ -0.59
NFIA-208ENST00000407417 ROBO2Q9HCK4 1378 aa11.36□□□□□ -0.59
NFIA-208ENST00000407417 MYOM2P54296 1465 aa11.36□□□□□ -0.59
NFIA-208ENST00000407417 DCAF11Q8TEB1 546 aa11.36□□□□□ -0.59
NFIA-208ENST00000407417 STK26Q9P289 416 aa11.36□□□□□ -0.59
NFIA-208ENST00000407417 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
NFIA-208ENST00000407417 NRXN1Q9ULB1 1477 aa11.35□□□□□ -0.59
NFIA-208ENST00000407417 ASXL1Q8IXJ9 1541 aa11.35□□□□□ -0.59
NFIA-208ENST00000407417 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
NFIA-208ENST00000407417 CFAP70Q5T0N1 1121 aa11.35□□□□□ -0.59
NFIA-208ENST00000407417 ILDR2Q71H61 639 aa11.35□□□□□ -0.59
NFIA-208ENST00000407417 SIN3AQ96ST3 1273 aa11.34□□□□□ -0.59
NFIA-208ENST00000407417 C19orf44Q9H6X5 657 aa11.34□□□□□ -0.59
NFIA-208ENST00000407417 C14orf93Q9H972 538 aaKnown RBP11.34□□□□□ -0.59
NFIA-208ENST00000407417 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
NFIA-208ENST00000407417 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
NFIA-208ENST00000407417 PTCH1Q13635 1447 aa11.33□□□□□ -0.6
NFIA-208ENST00000407417 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.33□□□□□ -0.6
NFIA-208ENST00000407417 ATF3P18847 181 aa11.33□□□□□ -0.6
NFIA-208ENST00000407417 LRPPRCP42704 1394 aaKnown RBP11.32□□□□□ -0.6
NFIA-208ENST00000407417 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
NFIA-208ENST00000407417 FAM135BQ49AJ0 1406 aa11.32□□□□□ -0.6
NFIA-208ENST00000407417 PRAG1Q86YV5 1406 aa11.31□□□□□ -0.6
NFIA-208ENST00000407417 YTHDC2Q9H6S0 1430 aaKnown RBP11.31□□□□□ -0.6
NFIA-208ENST00000407417 ADGRL3Q9HAR2 1447 aa11.31□□□□□ -0.6
NFIA-208ENST00000407417 HNRNPUQ00839 825 aaKnown RBP eCLIP11.31□□□□□ -0.66e-6■□□□□ 8.3
NFIA-208ENST00000407417 WAPLQ7Z5K2 1190 aa11.31□□□□□ -0.6
NFIA-208ENST00000407417 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
NFIA-208ENST00000407417 ROBO1Q9Y6N7 1651 aa11.31□□□□□ -0.6
NFIA-208ENST00000407417 PLEKHH1Q9ULM0 1364 aa11.31□□□□□ -0.6
NFIA-208ENST00000407417 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
NFIA-208ENST00000407417 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
NFIA-208ENST00000407417 ABCC11Q96J66 1382 aa11.29□□□□□ -0.6
NFIA-208ENST00000407417 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
NFIA-208ENST00000407417 TECPR2O15040 1411 aa11.28□□□□□ -0.6
NFIA-208ENST00000407417 DCCP43146 1447 aa11.28□□□□□ -0.6
NFIA-208ENST00000407417 MST1RQ04912 1400 aa11.28□□□□□ -0.6
NFIA-208ENST00000407417 ZBED9Q6R2W3 1325 aa11.28□□□□□ -0.6
NFIA-208ENST00000407417 LAMC1P11047 1609 aa11.28□□□□□ -0.6
NFIA-208ENST00000407417 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
NFIA-208ENST00000407417 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.6
NFIA-208ENST00000407417 RTN4Q9NQC3 1192 aaKnown RBP11.27□□□□□ -0.6
NFIA-208ENST00000407417 SAFB2Q14151 953 aaKnown RBP eCLIP11.27□□□□□ -0.61
NFIA-208ENST00000407417 BRINP3Q76B58 766 aa11.27□□□□□ -0.61
NFIA-208ENST00000407417 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
NFIA-208ENST00000407417 KNDC1Q76NI1 1749 aa11.26□□□□□ -0.61
NFIA-208ENST00000407417 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
NFIA-208ENST00000407417 PRAM1Q96QH2 718 aa11.26□□□□□ -0.61
NFIA-208ENST00000407417 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
NFIA-208ENST00000407417 NEFMP07197 916 aa11.25□□□□□ -0.61
NFIA-208ENST00000407417 GSE1Q14687 1217 aa11.25□□□□□ -0.61
NFIA-208ENST00000407417 C1orf167Q5SNV9 1468 aa11.24□□□□□ -0.61
NFIA-208ENST00000407417 NUTM2FA1L443 756 aa11.24□□□□□ -0.61
NFIA-208ENST00000407417 NBPF1Q3BBV0 1214 aa11.24□□□□□ -0.61
NFIA-208ENST00000407417 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
NFIA-208ENST00000407417 DDX17Q92841 729 aaKnown RBP11.24□□□□□ -0.61
NFIA-208ENST00000407417 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
NFIA-208ENST00000407417 IRX6P78412 446 aaPredicted RBP11.23□□□□□ -0.61
NFIA-208ENST00000407417 ORAI2Q96SN7 254 aa11.23□□□□□ -0.61
NFIA-208ENST00000407417 POGKQ9P215 609 aa11.23□□□□□ -0.61
NFIA-208ENST00000407417 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
NFIA-208ENST00000407417 DLC1Q96QB1 1528 aa11.22□□□□□ -0.61
NFIA-208ENST00000407417 CDC42BPGQ6DT37 1551 aa11.22□□□□□ -0.61
NFIA-208ENST00000407417 SMG6Q86US8 1419 aaKnown RBP11.21□□□□□ -0.61
NFIA-208ENST00000407417 HIRIP3Q9BW71 556 aaPredicted RBP11.21□□□□□ -0.61
NFIA-208ENST00000407417 COL16A1Q07092 1604 aaPredicted RBP11.21□□□□□ -0.62
NFIA-208ENST00000407417 AHDC1Q5TGY3 1603 aaPredicted RBP11.21□□□□□ -0.62
NFIA-208ENST00000407417 MINK1Q8N4C8 1332 aaPredicted RBP11.21□□□□□ -0.62
NFIA-208ENST00000407417 MED1Q15648 1581 aaPredicted RBP11.21□□□□□ -0.62
NFIA-208ENST00000407417 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
NFIA-208ENST00000407417 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
NFIA-208ENST00000407417 MS4A1P11836 297 aa11.2□□□□□ -0.62
NFIA-208ENST00000407417 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
NFIA-208ENST00000407417 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
NFIA-208ENST00000407417 KIAA1210Q9ULL0 1709 aa11.18□□□□□ -0.62
NFIA-208ENST00000407417 TONSLQ96HA7 1378 aa11.18□□□□□ -0.62
NFIA-208ENST00000407417 JCADQ9P266 1359 aa11.18□□□□□ -0.62
NFIA-208ENST00000407417 NHSL1Q5SYE7 1610 aa11.18□□□□□ -0.62
NFIA-208ENST00000407417 FMN2Q9NZ56 1722 aa11.18□□□□□ -0.62
NFIA-208ENST00000407417 ARHGEF28Q8N1W1 1705 aaKnown RBP11.17□□□□□ -0.62
NFIA-208ENST00000407417 XPCQ01831 940 aaPredicted RBP11.17□□□□□ -0.62
NFIA-208ENST00000407417 PHF23Q9BUL5 403 aaPredicted RBP11.17□□□□□ -0.62
NFIA-208ENST00000407417 BRPF3Q9ULD4 1205 aa11.17□□□□□ -0.62
NFIA-208ENST00000407417 FOXO3O43524 673 aa11.16□□□□□ -0.62
NFIA-208ENST00000407417 TRPM1Q7Z4N2 1603 aa11.16□□□□□ -0.62
NFIA-208ENST00000407417 ADGRB2O60241 1585 aa11.15□□□□□ -0.62
NFIA-208ENST00000407417 ROCK2O75116 1388 aaKnown RBP11.15□□□□□ -0.62
NFIA-208ENST00000407417 RRP9O43818 475 aaKnown RBP11.15□□□□□ -0.62
NFIA-208ENST00000407417 ZMYND15Q9H091 742 aa11.15□□□□□ -0.62
NFIA-208ENST00000407417 SOS2Q07890 1332 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms