RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 IQGAP3Q86VI3 1631 aa23.42■■□□□ 1.34
SYNGR1-205ENST00000406293 COL22A1Q8NFW1 1626 aaPredicted RBP23.42■■□□□ 1.34
SYNGR1-205ENST00000406293 UNC5CLQ8IV45 518 aa23.42■■□□□ 1.34
SYNGR1-205ENST00000406293 RALGAPBQ86X10 1494 aa23.4■■□□□ 1.34
SYNGR1-205ENST00000406293 LRP5O75197 1615 aa23.4■■□□□ 1.34
SYNGR1-205ENST00000406293 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
SYNGR1-205ENST00000406293 FOXO3O43524 673 aa23.39■■□□□ 1.33
SYNGR1-205ENST00000406293 SEPT12Q8IYM1 358 aa23.39■■□□□ 1.33
SYNGR1-205ENST00000406293 CCDC9Q9Y3X0 531 aaKnown RBP23.38■■□□□ 1.33
SYNGR1-205ENST00000406293 HRCP23327 699 aa23.36■■□□□ 1.33
SYNGR1-205ENST00000406293 MARF1Q9Y4F3 1742 aaKnown RBP23.36■■□□□ 1.33
SYNGR1-205ENST00000406293 A0A0G2JS52 829 aa23.35■■□□□ 1.33
SYNGR1-205ENST00000406293 HAP1P54257 671 aaPredicted RBP23.35■■□□□ 1.33
SYNGR1-205ENST00000406293 MYT1Q01538 1121 aa23.35■■□□□ 1.33
SYNGR1-205ENST00000406293 GLI3P10071 1580 aa23.35■■□□□ 1.33
SYNGR1-205ENST00000406293 NUTM2FA1L443 756 aa23.34■■□□□ 1.33
SYNGR1-205ENST00000406293 PLEKHG5O94827 1062 aa23.34■■□□□ 1.33
SYNGR1-205ENST00000406293 BAG6P46379 1132 aa23.34■■□□□ 1.33
SYNGR1-205ENST00000406293 ITGAEP38570 1179 aa23.33■■□□□ 1.33
SYNGR1-205ENST00000406293 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
SYNGR1-205ENST00000406293 KRT27Q7Z3Y8 459 aa23.32■■□□□ 1.32
SYNGR1-205ENST00000406293 SPHKAPQ2M3C7 1700 aa23.32■■□□□ 1.32
SYNGR1-205ENST00000406293 NEXMIFQ5QGS0 1516 aa23.32■■□□□ 1.32
SYNGR1-205ENST00000406293 BRWD3Q6RI45 1802 aa23.31■■□□□ 1.32
SYNGR1-205ENST00000406293 PXDNQ92626 1479 aa23.31■■□□□ 1.32
SYNGR1-205ENST00000406293 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.3■■□□□ 1.32
SYNGR1-205ENST00000406293 SLIT2O94813 1529 aa23.29■■□□□ 1.32
SYNGR1-205ENST00000406293 HFM1A2PYH4 1435 aa23.29■■□□□ 1.32
SYNGR1-205ENST00000406293 VGFO15240 615 aaPredicted RBP23.29■■□□□ 1.32
SYNGR1-205ENST00000406293 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
SYNGR1-205ENST00000406293 VPS72Q15906 364 aa23.26■■□□□ 1.31
SYNGR1-205ENST00000406293 R3HDM1Q15032 1099 aaKnown RBP23.25■■□□□ 1.31
SYNGR1-205ENST00000406293 CLTCL1P53675 1640 aa23.23■■□□□ 1.31
SYNGR1-205ENST00000406293 YY1P25490 414 aa23.23■■□□□ 1.31
SYNGR1-205ENST00000406293 EN1Q05925 392 aaPredicted RBP23.23■■□□□ 1.31
SYNGR1-205ENST00000406293 SPATA31A3Q5VYP0 1347 aa23.23■■□□□ 1.31
SYNGR1-205ENST00000406293 KRT28Q7Z3Y7 464 aa23.21■■□□□ 1.31
SYNGR1-205ENST00000406293 CABLES1Q8TDN4 633 aa23.21■■□□□ 1.31
SYNGR1-205ENST00000406293 CDC42BPGQ6DT37 1551 aa23.2■■□□□ 1.3
SYNGR1-205ENST00000406293 NAIPQ13075 1403 aa23.2■■□□□ 1.3
SYNGR1-205ENST00000406293 LMOD2Q6P5Q4 547 aa23.2■■□□□ 1.3
SYNGR1-205ENST00000406293 STK26Q9P289 416 aa23.2■■□□□ 1.3
SYNGR1-205ENST00000406293 KIF1BO60333 1816 aa23.19■■□□□ 1.3
SYNGR1-205ENST00000406293 USP32Q8NFA0 1604 aa23.19■■□□□ 1.3
SYNGR1-205ENST00000406293 ONECUT3O60422 494 aaPredicted RBP23.18■■□□□ 1.3
SYNGR1-205ENST00000406293 FAM98CQ17RN3 349 aaKnown RBP23.17■■□□□ 1.3
SYNGR1-205ENST00000406293 WAPLQ7Z5K2 1190 aa23.17■■□□□ 1.3
SYNGR1-205ENST00000406293 PRAG1Q86YV5 1406 aa23.16■■□□□ 1.3
SYNGR1-205ENST00000406293 CCDC144AA2RUR9 1427 aa23.15■■□□□ 1.3
SYNGR1-205ENST00000406293 FAM182BQ5T319 152 aa23.14■■□□□ 1.29
SYNGR1-205ENST00000406293 PSME1Q06323 249 aa23.13■■□□□ 1.29
SYNGR1-205ENST00000406293 RPGRIP1LQ68CZ1 1315 aa23.12■■□□□ 1.29
SYNGR1-205ENST00000406293 PLCH1Q4KWH8 1693 aa23.1■■□□□ 1.29
SYNGR1-205ENST00000406293 EZH2Q15910 746 aaKnown RBP23.1■■□□□ 1.29
SYNGR1-205ENST00000406293 TNS3Q68CZ2 1445 aa23.09■■□□□ 1.29
SYNGR1-205ENST00000406293 FAM83GA6ND36 823 aa23.09■■□□□ 1.29
SYNGR1-205ENST00000406293 NWD2Q9ULI1 1742 aa23.08■■□□□ 1.28
SYNGR1-205ENST00000406293 DCAF8L1A6NGE4 600 aa23.07■■□□□ 1.28
SYNGR1-205ENST00000406293 PHF8Q9UPP1 1060 aa23.07■■□□□ 1.28
SYNGR1-205ENST00000406293 BTG4Q9NY30 223 aa23.06■■□□□ 1.28
SYNGR1-205ENST00000406293 KIF1AQ12756 1690 aa23.06■■□□□ 1.28
SYNGR1-205ENST00000406293 RGPD1P0DJD0 1748 aa23.05■■□□□ 1.28
SYNGR1-205ENST00000406293 PLEKHH1Q9ULM0 1364 aa23.05■■□□□ 1.28
SYNGR1-205ENST00000406293 TMEM132EQ6IEE7 984 aa23.03■■□□□ 1.28
SYNGR1-205ENST00000406293 PPP1R1BQ9UD71 204 aaPredicted RBP23.03■■□□□ 1.28
SYNGR1-205ENST00000406293 ADGRF5Q8IZF2 1346 aa23.02■■□□□ 1.28
SYNGR1-205ENST00000406293 ARHGEF10O15013 1369 aa23.01■■□□□ 1.27
SYNGR1-205ENST00000406293 TRIM37O94972 964 aa23.01■■□□□ 1.27
SYNGR1-205ENST00000406293 FMN2Q9NZ56 1722 aa23.01■■□□□ 1.27
SYNGR1-205ENST00000406293 PPLO60437 1756 aa23■■□□□ 1.27
SYNGR1-205ENST00000406293 SBNO1A3KN83 1393 aa23■■□□□ 1.27
SYNGR1-205ENST00000406293 APBA3O96018 575 aa22.99■■□□□ 1.27
SYNGR1-205ENST00000406293 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
SYNGR1-205ENST00000406293 CAMKK2Q96RR4 588 aa22.98■■□□□ 1.27
SYNGR1-205ENST00000406293 DISP2A7MBM2 1401 aa22.98■■□□□ 1.27
SYNGR1-205ENST00000406293 PMFBP1Q8TBY8 1022 aa22.97■■□□□ 1.27
SYNGR1-205ENST00000406293 ABCC11Q96J66 1382 aa22.97■■□□□ 1.27
SYNGR1-205ENST00000406293 TECPR2O15040 1411 aa22.97■■□□□ 1.27
SYNGR1-205ENST00000406293 NBPF8Q3BBV2 869 aa22.95■■□□□ 1.26
SYNGR1-205ENST00000406293 NBPF14Q5TI25 921 aa22.95■■□□□ 1.26
SYNGR1-205ENST00000406293 SPATA31A5Q5VU36 1347 aa22.95■■□□□ 1.26
SYNGR1-205ENST00000406293 SPATA31A7Q8IWB4 1347 aa22.95■■□□□ 1.26
SYNGR1-205ENST00000406293 ABCA3Q99758 1704 aa22.95■■□□□ 1.26
SYNGR1-205ENST00000406293 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
SYNGR1-205ENST00000406293 FAM196AQ6ZSG2 479 aa22.94■■□□□ 1.26
SYNGR1-205ENST00000406293 SLC4A1APQ9BWU0 796 aaKnown RBP22.94■■□□□ 1.26
SYNGR1-205ENST00000406293 NRAPQ86VF7 1730 aa22.94■■□□□ 1.26
SYNGR1-205ENST00000406293 SAFB2Q14151 953 aaKnown RBP eCLIP22.93■■□□□ 1.26
SYNGR1-205ENST00000406293 PPARGC1BQ86YN6 1023 aaKnown RBP22.93■■□□□ 1.26
SYNGR1-205ENST00000406293 RGPD8O14715 1765 aaPredicted RBP22.93■■□□□ 1.26
SYNGR1-205ENST00000406293 TNS1Q9HBL0 1735 aaKnown RBP22.93■■□□□ 1.26
SYNGR1-205ENST00000406293 ADGRB2O60241 1585 aa22.93■■□□□ 1.26
SYNGR1-205ENST00000406293 NRXN1Q9ULB1 1477 aa22.92■■□□□ 1.26
SYNGR1-205ENST00000406293 SPON1Q9HCB6 807 aa22.91■■□□□ 1.26
SYNGR1-205ENST00000406293 YTHDC2Q9H6S0 1430 aaKnown RBP22.9■■□□□ 1.26
SYNGR1-205ENST00000406293 PARD3Q8TEW0 1356 aa22.89■■□□□ 1.25
SYNGR1-205ENST00000406293 PRDM11Q9NQV5 511 aa22.88■■□□□ 1.25
SYNGR1-205ENST00000406293 COL14A1Q05707 1796 aaKnown RBP22.88■■□□□ 1.25
SYNGR1-205ENST00000406293 KNDC1Q76NI1 1749 aa22.88■■□□□ 1.25
SYNGR1-205ENST00000406293 IFT172Q9UG01 1749 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms