RNA–Protein interactions for RNA: ENST00000405506.2

XRCC6-204, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 5 BASIC

Gene XRCC6, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-204ENST00000405506 SAFB2Q14151 953 aaKnown RBP eCLIP13.96□□□□□ -0.17
XRCC6-204ENST00000405506 SLC24A1O60721 1099 aa13.96□□□□□ -0.18
XRCC6-204ENST00000405506 PDE3BQ13370 1112 aa13.95□□□□□ -0.18
XRCC6-204ENST00000405506 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.95□□□□□ -0.18
XRCC6-204ENST00000405506 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
XRCC6-204ENST00000405506 METP08581 1390 aa13.94□□□□□ -0.18
XRCC6-204ENST00000405506 DLC1Q96QB1 1528 aa13.94□□□□□ -0.18
XRCC6-204ENST00000405506 LTKP29376 864 aa13.94□□□□□ -0.18
XRCC6-204ENST00000405506 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
XRCC6-204ENST00000405506 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
XRCC6-204ENST00000405506 KNDC1Q76NI1 1749 aa13.93□□□□□ -0.18
XRCC6-204ENST00000405506 SLIT1O75093 1534 aa13.93□□□□□ -0.18
XRCC6-204ENST00000405506 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
XRCC6-204ENST00000405506 ARHGAP23Q9P227 1491 aa13.92□□□□□ -0.18
XRCC6-204ENST00000405506 ADAMTS13Q76LX8 1427 aa13.92□□□□□ -0.18
XRCC6-204ENST00000405506 KNSTRNQ9Y448 316 aa13.92□□□□□ -0.18
XRCC6-204ENST00000405506 PLEKHH1Q9ULM0 1364 aa13.92□□□□□ -0.18
XRCC6-204ENST00000405506 EVC2Q86UK5 1308 aa13.92□□□□□ -0.18
XRCC6-204ENST00000405506 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
XRCC6-204ENST00000405506 SLC12A5Q9H2X9 1139 aa13.91□□□□□ -0.18
XRCC6-204ENST00000405506 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
XRCC6-204ENST00000405506 ABCC11Q96J66 1382 aa13.9□□□□□ -0.18
XRCC6-204ENST00000405506 MSH5O43196 834 aa13.9□□□□□ -0.18
XRCC6-204ENST00000405506 WAPLQ7Z5K2 1190 aa13.9□□□□□ -0.18
XRCC6-204ENST00000405506 POGKQ9P215 609 aa13.9□□□□□ -0.18
XRCC6-204ENST00000405506 BLMP54132 1417 aaPredicted RBP13.9□□□□□ -0.18
XRCC6-204ENST00000405506 PLEKHG1Q9ULL1 1385 aa13.89□□□□□ -0.19
XRCC6-204ENST00000405506 CEP170BQ9Y4F5 1589 aaPredicted RBP13.89□□□□□ -0.19
XRCC6-204ENST00000405506 NPC1L1Q9UHC9 1359 aa13.89□□□□□ -0.19
XRCC6-204ENST00000405506 HDGFP51858 240 aaKnown RBP13.89□□□□□ -0.19
XRCC6-204ENST00000405506 PUS7Q96PZ0 661 aaKnown RBP13.89□□□□□ -0.19
XRCC6-204ENST00000405506 MED14O60244 1454 aa13.88□□□□□ -0.19
XRCC6-204ENST00000405506 CPS1P31327 1500 aa13.88□□□□□ -0.19
XRCC6-204ENST00000405506 TXNDC2Q86VQ3 553 aa13.88□□□□□ -0.19
XRCC6-204ENST00000405506 USP32Q8NFA0 1604 aa13.87□□□□□ -0.19
XRCC6-204ENST00000405506 TECPR2O15040 1411 aa13.87□□□□□ -0.19
XRCC6-204ENST00000405506 NSD3Q9BZ95 1437 aa13.87□□□□□ -0.19
XRCC6-204ENST00000405506 ZNF142P52746 1687 aaPredicted RBP13.87□□□□□ -0.19
XRCC6-204ENST00000405506 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
XRCC6-204ENST00000405506 PTPRUQ92729 1446 aa13.85□□□□□ -0.19
XRCC6-204ENST00000405506 RRP1P56182 461 aaKnown RBP13.84□□□□□ -0.19
XRCC6-204ENST00000405506 SRPK2P78362 688 aaKnown RBP13.84□□□□□ -0.19
XRCC6-204ENST00000405506 CDK19Q9BWU1 502 aa13.84□□□□□ -0.19
XRCC6-204ENST00000405506 ANKRD36BQ8N2N9 1353 aa13.84□□□□□ -0.19
XRCC6-204ENST00000405506 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
XRCC6-204ENST00000405506 THEMISQ8N1K5 641 aaPredicted RBP13.83□□□□□ -0.19
XRCC6-204ENST00000405506 SLC26A8Q96RN1 970 aa13.83□□□□□ -0.19
XRCC6-204ENST00000405506 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
XRCC6-204ENST00000405506 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.2
XRCC6-204ENST00000405506 FAM135BQ49AJ0 1406 aa13.83□□□□□ -0.2
XRCC6-204ENST00000405506 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.2
XRCC6-204ENST00000405506 EID1Q9Y6B2 187 aa13.83□□□□□ -0.2
XRCC6-204ENST00000405506 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
XRCC6-204ENST00000405506 RCAN3Q9UKA8 241 aa13.82□□□□□ -0.2
XRCC6-204ENST00000405506 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
XRCC6-204ENST00000405506 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
XRCC6-204ENST00000405506 SETD1BQ9UPS6 1966 aaKnown RBP13.82□□□□□ -0.2
XRCC6-204ENST00000405506 SIRT1Q96EB6 747 aa13.81□□□□□ -0.2
XRCC6-204ENST00000405506 DIP2AQ14689 1571 aa13.8□□□□□ -0.2
XRCC6-204ENST00000405506 NINLQ9Y2I6 1382 aa13.8□□□□□ -0.2
XRCC6-204ENST00000405506 XRN1Q8IZH2 1706 aaKnown RBP13.79□□□□□ -0.2
XRCC6-204ENST00000405506 ADGRB2O60241 1585 aa13.79□□□□□ -0.2
XRCC6-204ENST00000405506 ANKRD26Q9UPS8 1709 aa13.79□□□□□ -0.2
XRCC6-204ENST00000405506 TBX22Q9Y458 520 aa13.78□□□□□ -0.2
XRCC6-204ENST00000405506 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
XRCC6-204ENST00000405506 CABP1Q9NZU7 370 aa13.78□□□□□ -0.2
XRCC6-204ENST00000405506 KIF20BQ96Q89 1820 aa13.77□□□□□ -0.21
XRCC6-204ENST00000405506 CGNL1Q0VF96 1302 aa13.76□□□□□ -0.21
XRCC6-204ENST00000405506 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
XRCC6-204ENST00000405506 MORC1Q86VD1 984 aa13.75□□□□□ -0.21
XRCC6-204ENST00000405506 CDCA7LQ96GN5 454 aa13.75□□□□□ -0.21
XRCC6-204ENST00000405506 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
XRCC6-204ENST00000405506 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
XRCC6-204ENST00000405506 TOPAZ1Q8N9V7 1692 aa13.75□□□□□ -0.21
XRCC6-204ENST00000405506 AKAP12Q02952 1782 aa13.75□□□□□ -0.21
XRCC6-204ENST00000405506 ZNF521Q96K83 1311 aa13.75□□□□□ -0.21
XRCC6-204ENST00000405506 ATP7BP35670 1465 aa13.74□□□□□ -0.21
XRCC6-204ENST00000405506 EXOC6Q8TAG9 804 aa13.74□□□□□ -0.21
XRCC6-204ENST00000405506 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
XRCC6-204ENST00000405506 CHD2O14647 1828 aaKnown RBP13.74□□□□□ -0.21
XRCC6-204ENST00000405506 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
XRCC6-204ENST00000405506 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
XRCC6-204ENST00000405506 PTCH1Q13635 1447 aa13.74□□□□□ -0.21
XRCC6-204ENST00000405506 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
XRCC6-204ENST00000405506 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
XRCC6-204ENST00000405506 MON2Q7Z3U7 1717 aa13.73□□□□□ -0.21
XRCC6-204ENST00000405506 NSD2O96028 1365 aa13.73□□□□□ -0.21
XRCC6-204ENST00000405506 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
XRCC6-204ENST00000405506 CDC42BPGQ6DT37 1551 aa13.73□□□□□ -0.21
XRCC6-204ENST00000405506 NUDT16Q96DE0 195 aaKnown RBP13.72□□□□□ -0.21
XRCC6-204ENST00000405506 RGPD8O14715 1765 aaPredicted RBP13.72□□□□□ -0.21
XRCC6-204ENST00000405506 CPSF1Q10570 1443 aaKnown RBP13.72□□□□□ -0.21
XRCC6-204ENST00000405506 TCERG1O14776 1098 aaKnown RBP13.71□□□□□ -0.21
XRCC6-204ENST00000405506 FYB1O15117 783 aa13.71□□□□□ -0.21
XRCC6-204ENST00000405506 HDGFL2Q7Z4V5 671 aaPredicted RBP13.71□□□□□ -0.21
XRCC6-204ENST00000405506 ANKLE2Q86XL3 938 aa13.71□□□□□ -0.21
XRCC6-204ENST00000405506 GGNBP2Q9H3C7 697 aa13.71□□□□□ -0.21
XRCC6-204ENST00000405506 TRMT2AQ8IZ69 625 aaKnown RBP13.71□□□□□ -0.22
XRCC6-204ENST00000405506 POLR3AO14802 1390 aaPredicted RBP13.7□□□□□ -0.22
XRCC6-204ENST00000405506 MS4A1P11836 297 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms