RNA–Protein interactions for RNA: ENST00000404574.5

SMTN-204, Transcript of smoothelin, humanhuman

TSL 2 BASIC

Gene SMTN, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-204ENST00000404574 PTCH1Q13635 1447 aa27.35■■□□□ 1.97
SMTN-204ENST00000404574 MINK1Q8N4C8 1332 aaPredicted RBP27.35■■□□□ 1.97
SMTN-204ENST00000404574 EVC2Q86UK5 1308 aa27.34■■□□□ 1.97
SMTN-204ENST00000404574 XRN1Q8IZH2 1706 aaKnown RBP27.33■■□□□ 1.97
SMTN-204ENST00000404574 CHD2O14647 1828 aaKnown RBP27.33■■□□□ 1.97
SMTN-204ENST00000404574 DDX10Q13206 875 aaKnown RBP27.33■■□□□ 1.96
SMTN-204ENST00000404574 DIEXFQ68CQ4 756 aaKnown RBP27.27■■□□□ 1.96
SMTN-204ENST00000404574 SRPK2P78362 688 aaKnown RBP27.25■■□□□ 1.95
SMTN-204ENST00000404574 PUS7Q96PZ0 661 aaKnown RBP27.25■■□□□ 1.95
SMTN-204ENST00000404574 NWD1Q149M9 1564 aa27.25■■□□□ 1.95
SMTN-204ENST00000404574 TULP4Q9NRJ4 1543 aa27.23■■□□□ 1.95
SMTN-204ENST00000404574 CDK19Q9BWU1 502 aa27.23■■□□□ 1.95
SMTN-204ENST00000404574 PROSER2Q86WR7 435 aaPredicted RBP27.22■■□□□ 1.95
SMTN-204ENST00000404574 WASLO00401 505 aaPredicted RBP27.21■■□□□ 1.95
SMTN-204ENST00000404574 CABP2Q9NPB3 220 aa27.21■■□□□ 1.95
SMTN-204ENST00000404574 NKTRP30414 1462 aaKnown RBP27.21■■□□□ 1.95
SMTN-204ENST00000404574 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.18■■□□□ 1.94
SMTN-204ENST00000404574 C14orf37Q86TY3 774 aa27.18■■□□□ 1.94
SMTN-204ENST00000404574 RBM33Q96EV2 1170 aaKnown RBP27.17■■□□□ 1.94
SMTN-204ENST00000404574 ATAD2Q6PL18 1390 aa27.16■■□□□ 1.94
SMTN-204ENST00000404574 ADGRB2O60241 1585 aa27.15■■□□□ 1.94
SMTN-204ENST00000404574 TMC1Q8TDI8 760 aa27.15■■□□□ 1.94
SMTN-204ENST00000404574 ZNF335Q9H4Z2 1342 aaPredicted RBP27.15■■□□□ 1.94
SMTN-204ENST00000404574 STRCP1A6NGW2 1772 aa27.11■■□□□ 1.93
SMTN-204ENST00000404574 ADGRL3Q9HAR2 1447 aa27.11■■□□□ 1.93
SMTN-204ENST00000404574 NINLQ9Y2I6 1382 aa27.1■■□□□ 1.93
SMTN-204ENST00000404574 PANK3Q9H999 370 aa27.1■■□□□ 1.93
SMTN-204ENST00000404574 NCOA3Q9Y6Q9 1424 aa27.09■■□□□ 1.93
SMTN-204ENST00000404574 TMEM94Q12767 1356 aa27.09■■□□□ 1.93
SMTN-204ENST00000404574 NUDT16Q96DE0 195 aaKnown RBP27.09■■□□□ 1.93
SMTN-204ENST00000404574 SLC12A5Q9H2X9 1139 aa27.09■■□□□ 1.93
SMTN-204ENST00000404574 C19orf44Q9H6X5 657 aa27.07■■□□□ 1.92
SMTN-204ENST00000404574 CCDC61Q9Y6R9 512 aa27.07■■□□□ 1.92
SMTN-204ENST00000404574 NALCNQ8IZF0 1738 aa27.05■■□□□ 1.92
SMTN-204ENST00000404574 NUTM2FA1L443 756 aa27.05■■□□□ 1.92
SMTN-204ENST00000404574 MYOM1P52179 1685 aa27.05■■□□□ 1.92
SMTN-204ENST00000404574 CABP1Q9NZU7 370 aa27.04■■□□□ 1.92
SMTN-204ENST00000404574 CDC42BPGQ6DT37 1551 aa27.04■■□□□ 1.92
SMTN-204ENST00000404574 TERF2IPQ9NYB0 399 aa27.02■■□□□ 1.92
SMTN-204ENST00000404574 PRR36Q9H6K5 1346 aa27.02■■□□□ 1.92
SMTN-204ENST00000404574 ATP7BP35670 1465 aa27.01■■□□□ 1.91
SMTN-204ENST00000404574 LRRC7Q96NW7 1537 aa27.01■■□□□ 1.91
SMTN-204ENST00000404574 PPIP5K1Q6PFW1 1433 aa27.01■■□□□ 1.91
SMTN-204ENST00000404574 MSH6P52701 1360 aa27■■□□□ 1.91
SMTN-204ENST00000404574 ANKARQ7Z5J8 1434 aa27■■□□□ 1.91
SMTN-204ENST00000404574 ATF3P18847 181 aa26.99■■□□□ 1.91
SMTN-204ENST00000404574 HDGFL2Q7Z4V5 671 aaPredicted RBP26.99■■□□□ 1.91
SMTN-204ENST00000404574 KNSTRNQ9Y448 316 aa26.99■■□□□ 1.91
SMTN-204ENST00000404574 ANKRD36BQ8N2N9 1353 aa26.99■■□□□ 1.91
SMTN-204ENST00000404574 ANP32CO43423 234 aa26.99■■□□□ 1.91
SMTN-204ENST00000404574 PER1O15534 1290 aaPredicted RBP26.98■■□□□ 1.91
SMTN-204ENST00000404574 FMN2Q9NZ56 1722 aa26.97■■□□□ 1.91
SMTN-204ENST00000404574 DCCP43146 1447 aa26.96■■□□□ 1.91
SMTN-204ENST00000404574 CADPS2Q86UW7 1296 aa26.96■■□□□ 1.91
SMTN-204ENST00000404574 PLEKHG3A1L390 1219 aa26.94■■□□□ 1.9
SMTN-204ENST00000404574 CARD14Q9BXL6 1004 aa26.93■■□□□ 1.9
SMTN-204ENST00000404574 A0A1W2PP64 1363 aa26.93■■□□□ 1.9
SMTN-204ENST00000404574 USP32Q8NFA0 1604 aa26.92■■□□□ 1.9
SMTN-204ENST00000404574 ZNF692Q9BU19 519 aaPredicted RBP26.91■■□□□ 1.9
SMTN-204ENST00000404574 ITSN1Q15811 1721 aa26.9■■□□□ 1.9
SMTN-204ENST00000404574 TOPAZ1Q8N9V7 1692 aa26.9■■□□□ 1.9
SMTN-204ENST00000404574 CD163L1Q9NR16 1453 aa26.9■■□□□ 1.9
SMTN-204ENST00000404574 CNGB1Q14028 1251 aaPredicted RBP26.9■■□□□ 1.9
SMTN-204ENST00000404574 ESCO1Q5FWF5 840 aa26.9■■□□□ 1.9
SMTN-204ENST00000404574 MIER1Q8N108 512 aa26.9■■□□□ 1.9
SMTN-204ENST00000404574 PMFBP1Q8TBY8 1022 aa26.9■■□□□ 1.9
SMTN-204ENST00000404574 NSD3Q9BZ95 1437 aa26.9■■□□□ 1.9
SMTN-204ENST00000404574 NGDNQ8NEJ9 315 aaKnown RBP26.89■■□□□ 1.9
SMTN-204ENST00000404574 XIRP1Q702N8 1843 aaKnown RBP26.89■■□□□ 1.89
SMTN-204ENST00000404574 ACEP12821 1306 aa26.88■■□□□ 1.89
SMTN-204ENST00000404574 CPSF1Q10570 1443 aaKnown RBP26.88■■□□□ 1.89
SMTN-204ENST00000404574 KTN1Q86UP2 1357 aaKnown RBP26.88■■□□□ 1.89
SMTN-204ENST00000404574 LTBP4Q8N2S1 1624 aa26.87■■□□□ 1.89
SMTN-204ENST00000404574 PHF8Q9UPP1 1060 aa26.87■■□□□ 1.89
SMTN-204ENST00000404574 RGPD8O14715 1765 aaPredicted RBP26.86■■□□□ 1.89
SMTN-204ENST00000404574 CGNL1Q0VF96 1302 aa26.86■■□□□ 1.89
SMTN-204ENST00000404574 C1orf167Q5SNV9 1468 aa26.85■■□□□ 1.89
SMTN-204ENST00000404574 AMER1Q5JTC6 1135 aaPredicted RBP26.85■■□□□ 1.89
SMTN-204ENST00000404574 CC2D1BQ5T0F9 858 aaKnown RBP26.85■■□□□ 1.89
SMTN-204ENST00000404574 PRKRIP1Q9H875 184 aaPredicted RBP26.85■■□□□ 1.89
SMTN-204ENST00000404574 MST1RQ04912 1400 aa26.84■■□□□ 1.89
SMTN-204ENST00000404574 POLR3AO14802 1390 aaPredicted RBP26.83■■□□□ 1.89
SMTN-204ENST00000404574 NPC1L1Q9UHC9 1359 aa26.83■■□□□ 1.88
SMTN-204ENST00000404574 ORAI2Q96SN7 254 aa26.82■■□□□ 1.88
SMTN-204ENST00000404574 EDC4Q6P2E9 1401 aaKnown RBP26.81■■□□□ 1.88
SMTN-204ENST00000404574 RALBP1Q15311 655 aa26.81■■□□□ 1.88
SMTN-204ENST00000404574 SLAIN2Q9P270 581 aa26.79■■□□□ 1.88
SMTN-204ENST00000404574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.79■■□□□ 1.88
SMTN-204ENST00000404574 USP6P35125 1406 aa26.78■■□□□ 1.88
SMTN-204ENST00000404574 AKAP12Q02952 1782 aa26.77■■□□□ 1.88
SMTN-204ENST00000404574 NSD2O96028 1365 aa26.76■■□□□ 1.88
SMTN-204ENST00000404574 PSME1Q06323 249 aa26.76■■□□□ 1.88
SMTN-204ENST00000404574 MON2Q7Z3U7 1717 aa26.75■■□□□ 1.87
SMTN-204ENST00000404574 PARD3Q8TEW0 1356 aa26.74■■□□□ 1.87
SMTN-204ENST00000404574 FYB1O15117 783 aa26.74■■□□□ 1.87
SMTN-204ENST00000404574 FOXO3O43524 673 aa26.74■■□□□ 1.87
SMTN-204ENST00000404574 TTC21BQ7Z4L5 1316 aa26.74■■□□□ 1.87
SMTN-204ENST00000404574 MORC1Q86VD1 984 aa26.73■■□□□ 1.87
SMTN-204ENST00000404574 KIF1AQ12756 1690 aa26.72■■□□□ 1.87
SMTN-204ENST00000404574 GGNBP2Q9H3C7 697 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms