RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.83■■■■□ 3.65
CGREF1-204ENST00000402550 EIF3AQ14152 1382 aaKnown RBP37.82■■■■□ 3.64
CGREF1-204ENST00000402550 USP47Q96K76 1375 aa37.81■■■■□ 3.64
CGREF1-204ENST00000402550 NALCNQ8IZF0 1738 aa37.81■■■■□ 3.64
CGREF1-204ENST00000402550 EIF4G2P78344 907 aaKnown RBP eCLIP37.8■■■■□ 3.64
CGREF1-204ENST00000402550 CENPJQ9HC77 1338 aaPredicted RBP37.8■■■■□ 3.64
CGREF1-204ENST00000402550 ATF3P18847 181 aa37.77■■■■□ 3.64
CGREF1-204ENST00000402550 MINK1Q8N4C8 1332 aaPredicted RBP37.76■■■■□ 3.63
CGREF1-204ENST00000402550 CADPS2Q86UW7 1296 aa37.76■■■■□ 3.63
CGREF1-204ENST00000402550 TOM1O60784 492 aa37.74■■■■□ 3.63
CGREF1-204ENST00000402550 HIRIP3Q9BW71 556 aaPredicted RBP37.74■■■■□ 3.63
CGREF1-204ENST00000402550 DCCP43146 1447 aa37.74■■■■□ 3.63
CGREF1-204ENST00000402550 UBAP1LF5GYI3 381 aa37.73■■■■□ 3.63
CGREF1-204ENST00000402550 ST20-MTHFSA0A0A6YYL1 179 aa37.7■■■■□ 3.63
CGREF1-204ENST00000402550 HSPA5P11021 654 aaKnown RBP37.68■■■■□ 3.62
CGREF1-204ENST00000402550 SLAIN2Q9P270 581 aa37.68■■■■□ 3.62
CGREF1-204ENST00000402550 QRICH2Q9H0J4 1663 aa37.67■■■■□ 3.62
CGREF1-204ENST00000402550 CDC42BPGQ6DT37 1551 aa37.66■■■■□ 3.62
CGREF1-204ENST00000402550 ADGRB2O60241 1585 aa37.65■■■■□ 3.62
CGREF1-204ENST00000402550 WASLO00401 505 aaPredicted RBP37.64■■■■□ 3.62
CGREF1-204ENST00000402550 SBNO2Q9Y2G9 1366 aa37.61■■■■□ 3.61
CGREF1-204ENST00000402550 MST1RQ04912 1400 aa37.61■■■■□ 3.61
CGREF1-204ENST00000402550 NUTM2FA1L443 756 aa37.59■■■■□ 3.61
CGREF1-204ENST00000402550 TESK2Q96S53 571 aa37.59■■■■□ 3.61
CGREF1-204ENST00000402550 CDK19Q9BWU1 502 aa37.59■■■■□ 3.61
CGREF1-204ENST00000402550 PIP4K2BP78356 416 aa37.58■■■■□ 3.61
CGREF1-204ENST00000402550 FMN2Q9NZ56 1722 aa37.56■■■■□ 3.6
CGREF1-204ENST00000402550 SLC24A1O60721 1099 aa37.55■■■■□ 3.6
CGREF1-204ENST00000402550 C1orf167Q5SNV9 1468 aa37.54■■■■□ 3.6
CGREF1-204ENST00000402550 EVC2Q86UK5 1308 aa37.54■■■■□ 3.6
CGREF1-204ENST00000402550 FBXO41Q8TF61 875 aa37.54■■■■□ 3.6
CGREF1-204ENST00000402550 SCAF1Q9H7N4 1312 aaKnown RBP37.52■■■■□ 3.6
CGREF1-204ENST00000402550 TULP4Q9NRJ4 1543 aa37.5■■■■□ 3.59
CGREF1-204ENST00000402550 SRPK2P78362 688 aaKnown RBP37.49■■■■□ 3.59
CGREF1-204ENST00000402550 ORAI2Q96SN7 254 aa37.49■■■■□ 3.59
CGREF1-204ENST00000402550 PRR36Q9H6K5 1346 aa37.48■■■■□ 3.59
CGREF1-204ENST00000402550 CABP2Q9NPB3 220 aa37.48■■■■□ 3.59
CGREF1-204ENST00000402550 ESCO1Q5FWF5 840 aa37.47■■■■□ 3.59
CGREF1-204ENST00000402550 RGPD8O14715 1765 aaPredicted RBP37.47■■■■□ 3.59
CGREF1-204ENST00000402550 BRINP3Q76B58 766 aa37.46■■■■□ 3.59
CGREF1-204ENST00000402550 NUDT16Q96DE0 195 aaKnown RBP37.46■■■■□ 3.59
CGREF1-204ENST00000402550 ANKARQ7Z5J8 1434 aa37.46■■■■□ 3.59
CGREF1-204ENST00000402550 USP32Q8NFA0 1604 aa37.45■■■■□ 3.59
CGREF1-204ENST00000402550 TMF1P82094 1093 aa37.45■■■■□ 3.59
CGREF1-204ENST00000402550 ROBO1Q9Y6N7 1651 aa37.43■■■■□ 3.58
CGREF1-204ENST00000402550 CCDC61Q9Y6R9 512 aa37.41■■■■□ 3.58
CGREF1-204ENST00000402550 ATP7BP35670 1465 aa37.4■■■■□ 3.58
CGREF1-204ENST00000402550 ZNF316A6NFI3 1004 aaPredicted RBP37.39■■■■□ 3.58
CGREF1-204ENST00000402550 DISP3Q9P2K9 1392 aa37.37■■■■□ 3.57
CGREF1-204ENST00000402550 CDCA8Q53HL2 280 aa37.37■■■■□ 3.57
CGREF1-204ENST00000402550 PHF8Q9UPP1 1060 aa37.37■■■■□ 3.57
CGREF1-204ENST00000402550 PUS7Q96PZ0 661 aaKnown RBP37.36■■■■□ 3.57
CGREF1-204ENST00000402550 PMFBP1Q8TBY8 1022 aa37.34■■■■□ 3.57
CGREF1-204ENST00000402550 FOXO3O43524 673 aa37.32■■■■□ 3.56
CGREF1-204ENST00000402550 ATAD2Q6PL18 1390 aa37.31■■■■□ 3.56
CGREF1-204ENST00000402550 DDX17Q92841 729 aaKnown RBP37.3■■■■□ 3.56
CGREF1-204ENST00000402550 CABP1Q9NZU7 370 aa37.29■■■■□ 3.56
CGREF1-204ENST00000402550 ITSN1Q15811 1721 aa37.29■■■■□ 3.56
CGREF1-204ENST00000402550 PLEKHG3A1L390 1219 aa37.29■■■■□ 3.56
CGREF1-204ENST00000402550 PPIP5K1Q6PFW1 1433 aa37.27■■■■□ 3.56
CGREF1-204ENST00000402550 TOPAZ1Q8N9V7 1692 aa37.27■■■■□ 3.56
CGREF1-204ENST00000402550 KIF1AQ12756 1690 aa37.26■■■■□ 3.55
CGREF1-204ENST00000402550 C11orf95C9JLR9 678 aaPredicted RBP37.25■■■■□ 3.55
CGREF1-204ENST00000402550 POLR3GLQ9BT43 218 aa37.25■■■■□ 3.55
CGREF1-204ENST00000402550 HSPA1LP34931 641 aa37.25■■■■□ 3.55
CGREF1-204ENST00000402550 NPHP3Q7Z494 1330 aa37.24■■■■□ 3.55
CGREF1-204ENST00000402550 NGDNQ8NEJ9 315 aaKnown RBP37.24■■■■□ 3.55
CGREF1-204ENST00000402550 KIF7Q2M1P5 1343 aa37.24■■■■□ 3.55
CGREF1-204ENST00000402550 NHSL1Q5SYE7 1610 aa37.23■■■■□ 3.55
CGREF1-204ENST00000402550 CCDC7Q96M83 1385 aa37.22■■■■□ 3.55
CGREF1-204ENST00000402550 ACEP12821 1306 aa37.22■■■■□ 3.55
CGREF1-204ENST00000402550 AHDC1Q5TGY3 1603 aaPredicted RBP37.21■■■■□ 3.55
CGREF1-204ENST00000402550 WASHC2AQ641Q2 1341 aa37.21■■■■□ 3.55
CGREF1-204ENST00000402550 ILDR1Q86SU0 546 aaPredicted RBP37.21■■■■□ 3.55
CGREF1-204ENST00000402550 SLC12A5Q9H2X9 1139 aa37.21■■■■□ 3.55
CGREF1-204ENST00000402550 TMC1Q8TDI8 760 aa37.2■■■■□ 3.55
CGREF1-204ENST00000402550 XPCQ01831 940 aaPredicted RBP37.19■■■■□ 3.54
CGREF1-204ENST00000402550 PSME1Q06323 249 aa37.19■■■■□ 3.54
CGREF1-204ENST00000402550 SOS2Q07890 1332 aaPredicted RBP37.19■■■■□ 3.54
CGREF1-204ENST00000402550 POLR3AO14802 1390 aaPredicted RBP37.19■■■■□ 3.54
CGREF1-204ENST00000402550 KRT28Q7Z3Y7 464 aa37.17■■■■□ 3.54
CGREF1-204ENST00000402550 PHLPP1O60346 1717 aa37.17■■■■□ 3.54
CGREF1-204ENST00000402550 PXDNQ92626 1479 aa37.13■■■■□ 3.53
CGREF1-204ENST00000402550 NINLQ9Y2I6 1382 aa37.11■■■■□ 3.53
CGREF1-204ENST00000402550 COL16A1Q07092 1604 aaPredicted RBP37.11■■■■□ 3.53
CGREF1-204ENST00000402550 LRRC59Q96AG4 307 aaKnown RBP37.1■■■■□ 3.53
CGREF1-204ENST00000402550 ZNF692Q9BU19 519 aaPredicted RBP37.1■■■■□ 3.53
CGREF1-204ENST00000402550 CPSF1Q10570 1443 aaKnown RBP37.08■■■■□ 3.53
CGREF1-204ENST00000402550 TERF2IPQ9NYB0 399 aa37.07■■■■□ 3.52
CGREF1-204ENST00000402550 CD163L1Q9NR16 1453 aa37.07■■■■□ 3.52
CGREF1-204ENST00000402550 MYOM1P52179 1685 aa37.06■■■■□ 3.52
CGREF1-204ENST00000402550 HDGFL2Q7Z4V5 671 aaPredicted RBP37.04■■■■□ 3.52
CGREF1-204ENST00000402550 SBNO1A3KN83 1393 aa37.02■■■■□ 3.52
CGREF1-204ENST00000402550 USP6P35125 1406 aa37.02■■■■□ 3.52
CGREF1-204ENST00000402550 SPATA31A3Q5VYP0 1347 aa37.02■■■■□ 3.52
CGREF1-204ENST00000402550 KTN1Q86UP2 1357 aaKnown RBP37.01■■■■□ 3.52
CGREF1-204ENST00000402550 AKAP12Q02952 1782 aa37.01■■■■□ 3.52
CGREF1-204ENST00000402550 A0A1W2PP64 1363 aa37.01■■■■□ 3.51
CGREF1-204ENST00000402550 PAK3O75914 559 aaPredicted RBP37■■■■□ 3.51
CGREF1-204ENST00000402550 TRPM3Q9HCF6 1732 aaPredicted RBP36.99■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms