RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 API5Q9BZZ5 524 aaKnown RBP17.92■□□□□ 0.46
GABPA-202ENST00000400075 MSH6P52701 1360 aa17.92■□□□□ 0.46
GABPA-202ENST00000400075 ZKSCAN2Q63HK3 967 aa17.92■□□□□ 0.46
GABPA-202ENST00000400075 SULT6B1Q6IMI4 303 aa17.91■□□□□ 0.46
GABPA-202ENST00000400075 LRPPRCP42704 1394 aaKnown RBP17.91■□□□□ 0.46
GABPA-202ENST00000400075 KIF6Q6ZMV9 814 aa17.91■□□□□ 0.46
GABPA-202ENST00000400075 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
GABPA-202ENST00000400075 PRKAR2BP31323 418 aa17.89■□□□□ 0.45
GABPA-202ENST00000400075 CTDP1Q9Y5B0 961 aaPredicted RBP17.89■□□□□ 0.45
GABPA-202ENST00000400075 CAMSAP2Q08AD1 1489 aa17.89■□□□□ 0.45
GABPA-202ENST00000400075 KIF7Q2M1P5 1343 aa17.88■□□□□ 0.45
GABPA-202ENST00000400075 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
GABPA-202ENST00000400075 ANP32EQ9BTT0 268 aa17.87■□□□□ 0.45
GABPA-202ENST00000400075 ROCK1Q13464 1354 aa17.87■□□□□ 0.45
GABPA-202ENST00000400075 WDR7Q9Y4E6 1490 aa17.87■□□□□ 0.45
GABPA-202ENST00000400075 KRT28Q7Z3Y7 464 aa17.87■□□□□ 0.45
GABPA-202ENST00000400075 HSCBQ8IWL3 235 aa17.87■□□□□ 0.45
GABPA-202ENST00000400075 FAM135AQ9P2D6 1515 aa17.86■□□□□ 0.45
GABPA-202ENST00000400075 RAD21O60216 631 aa17.86■□□□□ 0.45
GABPA-202ENST00000400075 PLCH2O75038 1416 aa17.86■□□□□ 0.45
GABPA-202ENST00000400075 ATP10BO94823 1461 aa17.85■□□□□ 0.45
GABPA-202ENST00000400075 CWC22Q9HCG8 908 aaKnown RBP17.84■□□□□ 0.45
GABPA-202ENST00000400075 RRS1Q15050 365 aaKnown RBP17.83■□□□□ 0.45
GABPA-202ENST00000400075 CCDC7Q96M83 1385 aa17.83■□□□□ 0.44
GABPA-202ENST00000400075 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
GABPA-202ENST00000400075 NBR1Q14596 966 aa17.82■□□□□ 0.44
GABPA-202ENST00000400075 PNISRQ8TF01 805 aaKnown RBP17.82■□□□□ 0.44
GABPA-202ENST00000400075 EXOC5O00471 708 aa17.82■□□□□ 0.44
GABPA-202ENST00000400075 VPS53Q5VIR6 699 aa17.81■□□□□ 0.44
GABPA-202ENST00000400075 CCDC30Q5VVM6 783 aa17.81■□□□□ 0.44
GABPA-202ENST00000400075 UHRF1BP1LA0JNW5 1464 aa17.81■□□□□ 0.44
GABPA-202ENST00000400075 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
GABPA-202ENST00000400075 PLIN1O60240 522 aa17.81■□□□□ 0.44
GABPA-202ENST00000400075 ABCC5O15440 1437 aa17.8■□□□□ 0.44
GABPA-202ENST00000400075 MARCH6O60337 910 aa17.8■□□□□ 0.44
GABPA-202ENST00000400075 APPP05067 770 aa17.8■□□□□ 0.44
GABPA-202ENST00000400075 RILPL2Q969X0 211 aa17.8■□□□□ 0.44
GABPA-202ENST00000400075 ZNF518AQ6AHZ1 1483 aa17.79■□□□□ 0.44
GABPA-202ENST00000400075 TCP11L2Q8N4U5 519 aa17.79■□□□□ 0.44
GABPA-202ENST00000400075 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
GABPA-202ENST00000400075 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.79■□□□□ 0.44
GABPA-202ENST00000400075 NPHP3Q7Z494 1330 aa17.78■□□□□ 0.44
GABPA-202ENST00000400075 HSP90AB4PQ58FF6 505 aa17.78■□□□□ 0.44
GABPA-202ENST00000400075 LMTK3Q96Q04 1460 aa17.78■□□□□ 0.44
GABPA-202ENST00000400075 HDGFL1Q5TGJ6 251 aa17.78■□□□□ 0.44
GABPA-202ENST00000400075 ANKRD45Q5TZF3 282 aa17.78■□□□□ 0.44
GABPA-202ENST00000400075 PCF11O94913 1555 aaKnown RBP17.77■□□□□ 0.44
GABPA-202ENST00000400075 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.44
GABPA-202ENST00000400075 ADGRF5Q8IZF2 1346 aa17.77■□□□□ 0.44
GABPA-202ENST00000400075 A2MP01023 1474 aa17.77■□□□□ 0.44
GABPA-202ENST00000400075 KIF16BQ96L93 1317 aa17.77■□□□□ 0.43
GABPA-202ENST00000400075 NCKAP5LQ9HCH0 1330 aa17.77■□□□□ 0.43
GABPA-202ENST00000400075 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.43
GABPA-202ENST00000400075 NCOA1Q15788 1441 aa17.76■□□□□ 0.43
GABPA-202ENST00000400075 DDX19BQ9UMR2 479 aa17.76■□□□□ 0.43
GABPA-202ENST00000400075 STARD3NLO95772 234 aa17.76■□□□□ 0.43
GABPA-202ENST00000400075 C8orf37Q96NL8 207 aa17.76■□□□□ 0.43
GABPA-202ENST00000400075 PLCB2Q00722 1185 aa17.76■□□□□ 0.43
GABPA-202ENST00000400075 DIAPH3Q9NSV4 1193 aa17.76■□□□□ 0.43
GABPA-202ENST00000400075 UBTFL1P0CB47 393 aaPredicted RBP17.75■□□□□ 0.43
GABPA-202ENST00000400075 PTCD1O75127 700 aaKnown RBP17.75■□□□□ 0.43
GABPA-202ENST00000400075 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
GABPA-202ENST00000400075 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
GABPA-202ENST00000400075 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
GABPA-202ENST00000400075 COG6Q9Y2V7 657 aa17.75■□□□□ 0.43
GABPA-202ENST00000400075 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
GABPA-202ENST00000400075 KDM5BQ9UGL1 1544 aa17.75■□□□□ 0.43
GABPA-202ENST00000400075 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
GABPA-202ENST00000400075 PPP2R1AP30153 589 aa17.74■□□□□ 0.43
GABPA-202ENST00000400075 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
GABPA-202ENST00000400075 AKAP17AQ02040 695 aaKnown RBP17.74■□□□□ 0.43
GABPA-202ENST00000400075 NAIPQ13075 1403 aa17.74■□□□□ 0.43
GABPA-202ENST00000400075 BICDL1Q6ZP65 573 aa17.73■□□□□ 0.43
GABPA-202ENST00000400075 ABCC2Q92887 1545 aa17.73■□□□□ 0.43
GABPA-202ENST00000400075 DHX16O60231 1041 aaKnown RBP17.73■□□□□ 0.43
GABPA-202ENST00000400075 CCDC27Q2M243 656 aa17.73■□□□□ 0.43
GABPA-202ENST00000400075 WDR62O43379 1518 aa17.73■□□□□ 0.43
GABPA-202ENST00000400075 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
GABPA-202ENST00000400075 CCDC34Q96HJ3 373 aa17.72■□□□□ 0.43
GABPA-202ENST00000400075 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
GABPA-202ENST00000400075 MPRIPQ6WCQ1 1025 aa17.72■□□□□ 0.43
GABPA-202ENST00000400075 KIF3AQ9Y496 699 aa17.72■□□□□ 0.43
GABPA-202ENST00000400075 CNTLNQ9NXG0 1405 aa17.72■□□□□ 0.43
GABPA-202ENST00000400075 ZPR1O75312 459 aa17.72■□□□□ 0.43
GABPA-202ENST00000400075 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
GABPA-202ENST00000400075 GPATCH8Q9UKJ3 1502 aaKnown RBP17.71■□□□□ 0.43
GABPA-202ENST00000400075 HTATSF1O43719 755 aaKnown RBP17.71■□□□□ 0.43
GABPA-202ENST00000400075 ADAMTS8Q9UP79 889 aa17.71■□□□□ 0.43
GABPA-202ENST00000400075 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
GABPA-202ENST00000400075 CHRNA2Q15822 529 aa17.71■□□□□ 0.43
GABPA-202ENST00000400075 ABCC10Q5T3U5 1492 aa17.71■□□□□ 0.43
GABPA-202ENST00000400075 MYL6BP14649 208 aa17.7■□□□□ 0.42
GABPA-202ENST00000400075 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
GABPA-202ENST00000400075 BTBD11A6QL63 1104 aa17.7■□□□□ 0.42
GABPA-202ENST00000400075 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
GABPA-202ENST00000400075 MFAP1P55081 439 aaKnown RBP17.7■□□□□ 0.42
GABPA-202ENST00000400075 CPLX2Q6PUV4 134 aaKnown RBP17.7■□□□□ 0.42
GABPA-202ENST00000400075 CNNM1Q9NRU3 951 aa17.7■□□□□ 0.42
GABPA-202ENST00000400075 NME9Q86XW9 330 aa17.7■□□□□ 0.42
GABPA-202ENST00000400075 LRRC59Q96AG4 307 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms