RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 CDC42BPGQ6DT37 1551 aa31.47■■■□□ 2.63
RUNX1-204ENST00000399237 DHX57Q6P158 1386 aaKnown RBP31.46■■■□□ 2.63
RUNX1-204ENST00000399237 ABCC11Q96J66 1382 aa31.46■■■□□ 2.63
RUNX1-204ENST00000399237 SHPRHQ149N8 1683 aa31.44■■■□□ 2.62
RUNX1-204ENST00000399237 WAPLQ7Z5K2 1190 aa31.44■■■□□ 2.62
RUNX1-204ENST00000399237 ADGRB1O14514 1584 aa31.43■■■□□ 2.62
RUNX1-204ENST00000399237 DDX17Q92841 729 aaKnown RBP31.41■■■□□ 2.62
RUNX1-204ENST00000399237 NUTM2BA6NNL0 878 aaPredicted RBP31.38■■■□□ 2.61
RUNX1-204ENST00000399237 NUTM2EB1AL46 878 aaPredicted RBP31.38■■■□□ 2.61
RUNX1-204ENST00000399237 NUTM2AQ8IVF1 878 aaPredicted RBP31.38■■■□□ 2.61
RUNX1-204ENST00000399237 DCAF11Q8TEB1 546 aa31.37■■■□□ 2.61
RUNX1-204ENST00000399237 FMN2Q9NZ56 1722 aa31.36■■■□□ 2.61
RUNX1-204ENST00000399237 ORAI2Q96SN7 254 aa31.36■■■□□ 2.61
RUNX1-204ENST00000399237 KDM2AQ9Y2K7 1162 aa31.35■■■□□ 2.61
RUNX1-204ENST00000399237 ZNF772Q68DY9 489 aaPredicted RBP31.34■■■□□ 2.61
RUNX1-204ENST00000399237 LRRC59Q96AG4 307 aaKnown RBP31.33■■■□□ 2.61
RUNX1-204ENST00000399237 DLC1Q96QB1 1528 aa31.32■■■□□ 2.6
RUNX1-204ENST00000399237 SIRT1Q96EB6 747 aa31.28■■■□□ 2.6
RUNX1-204ENST00000399237 PNPLA6Q8IY17 1366 aa31.28■■■□□ 2.6
RUNX1-204ENST00000399237 RGPD8O14715 1765 aaPredicted RBP31.27■■■□□ 2.6
RUNX1-204ENST00000399237 NUTM2FA1L443 756 aa31.24■■■□□ 2.59
RUNX1-204ENST00000399237 PRAM1Q96QH2 718 aa31.24■■■□□ 2.59
RUNX1-204ENST00000399237 ARHGEF28Q8N1W1 1705 aaKnown RBP31.24■■■□□ 2.59
RUNX1-204ENST00000399237 AFF2P51816 1311 aa31.23■■■□□ 2.59
RUNX1-204ENST00000399237 SOS2Q07890 1332 aaPredicted RBP31.22■■■□□ 2.59
RUNX1-204ENST00000399237 ADGRB2O60241 1585 aa31.22■■■□□ 2.59
RUNX1-204ENST00000399237 USP32Q8NFA0 1604 aa31.21■■■□□ 2.59
RUNX1-204ENST00000399237 SAFB2Q14151 953 aaKnown RBP eCLIP31.21■■■□□ 2.59
RUNX1-204ENST00000399237 PXDNQ92626 1479 aa31.21■■■□□ 2.59
RUNX1-204ENST00000399237 C8orf37Q96NL8 207 aa31.2■■■□□ 2.59
RUNX1-204ENST00000399237 KIAA1210Q9ULL0 1709 aa31.2■■■□□ 2.58
RUNX1-204ENST00000399237 STAC3Q96MF2 364 aa31.19■■■□□ 2.58
RUNX1-204ENST00000399237 TRAK1Q9UPV9 953 aa31.19■■■□□ 2.58
RUNX1-204ENST00000399237 RXRBP28702 533 aa31.18■■■□□ 2.58
RUNX1-204ENST00000399237 ESCO1Q5FWF5 840 aa31.18■■■□□ 2.58
RUNX1-204ENST00000399237 KIF1AQ12756 1690 aa31.16■■■□□ 2.58
RUNX1-204ENST00000399237 SIN3AQ96ST3 1273 aa31.15■■■□□ 2.58
RUNX1-204ENST00000399237 COL22A1Q8NFW1 1626 aaPredicted RBP31.14■■■□□ 2.58
RUNX1-204ENST00000399237 ADAMTS2O95450 1211 aa31.13■■■□□ 2.57
RUNX1-204ENST00000399237 XPCQ01831 940 aaPredicted RBP31.11■■■□□ 2.57
RUNX1-204ENST00000399237 FOXO3O43524 673 aa31.1■■■□□ 2.57
RUNX1-204ENST00000399237 POGKQ9P215 609 aa31.1■■■□□ 2.57
RUNX1-204ENST00000399237 NPHP3Q7Z494 1330 aa31.09■■■□□ 2.57
RUNX1-204ENST00000399237 CDK12Q9NYV4 1490 aaPredicted RBP31.08■■■□□ 2.57
RUNX1-204ENST00000399237 HIRIP3Q9BW71 556 aaPredicted RBP31.08■■■□□ 2.57
RUNX1-204ENST00000399237 NBPF1Q3BBV0 1214 aa31.07■■■□□ 2.56
RUNX1-204ENST00000399237 MINK1Q8N4C8 1332 aaPredicted RBP31.06■■■□□ 2.56
RUNX1-204ENST00000399237 L3MBTL2Q969R5 705 aa31.06■■■□□ 2.56
RUNX1-204ENST00000399237 NGLY1Q96IV0 654 aa31.06■■■□□ 2.56
RUNX1-204ENST00000399237 UPF1Q92900 1129 aaKnown RBP eCLIP31.05■■■□□ 2.56
RUNX1-204ENST00000399237 QTRT2Q9H974 415 aaKnown RBP31.05■■■□□ 2.56
RUNX1-204ENST00000399237 TRIM26Q12899 539 aaPredicted RBP31.03■■■□□ 2.56
RUNX1-204ENST00000399237 ANKARQ7Z5J8 1434 aa31.03■■■□□ 2.56
RUNX1-204ENST00000399237 TULP4Q9NRJ4 1543 aa31.03■■■□□ 2.56
RUNX1-204ENST00000399237 TRPM1Q7Z4N2 1603 aa31.02■■■□□ 2.56
RUNX1-204ENST00000399237 PRR36Q9H6K5 1346 aa31.02■■■□□ 2.56
RUNX1-204ENST00000399237 RGS12O14924 1447 aa31.02■■■□□ 2.56
RUNX1-204ENST00000399237 RBM6P78332 1123 aaKnown RBP31.01■■■□□ 2.55
RUNX1-204ENST00000399237 PHF8Q9UPP1 1060 aa31■■■□□ 2.55
RUNX1-204ENST00000399237 NEUROD1Q13562 356 aa30.99■■■□□ 2.55
RUNX1-204ENST00000399237 USP21Q9UK80 565 aa30.97■■■□□ 2.55
RUNX1-204ENST00000399237 MARF1Q9Y4F3 1742 aaKnown RBP30.97■■■□□ 2.55
RUNX1-204ENST00000399237 TRPM3Q9HCF6 1732 aaPredicted RBP30.96■■■□□ 2.55
RUNX1-204ENST00000399237 ATP7BP35670 1465 aa30.95■■■□□ 2.55
RUNX1-204ENST00000399237 WASLO00401 505 aaPredicted RBP30.95■■■□□ 2.55
RUNX1-204ENST00000399237 SPATA31A3Q5VYP0 1347 aa30.95■■■□□ 2.54
RUNX1-204ENST00000399237 KRT28Q7Z3Y7 464 aa30.94■■■□□ 2.54
RUNX1-204ENST00000399237 PMFBP1Q8TBY8 1022 aa30.94■■■□□ 2.54
RUNX1-204ENST00000399237 TOPAZ1Q8N9V7 1692 aa30.93■■■□□ 2.54
RUNX1-204ENST00000399237 ABCA3Q99758 1704 aa30.93■■■□□ 2.54
RUNX1-204ENST00000399237 FNBP4Q8N3X1 1017 aaPredicted RBP30.92■■■□□ 2.54
RUNX1-204ENST00000399237 QRICH2Q9H0J4 1663 aa30.91■■■□□ 2.54
RUNX1-204ENST00000399237 ITSN1Q15811 1721 aa30.91■■■□□ 2.54
RUNX1-204ENST00000399237 TRPC5Q9UL62 973 aaPredicted RBP30.91■■■□□ 2.54
RUNX1-204ENST00000399237 TNS3Q68CZ2 1445 aa30.9■■■□□ 2.54
RUNX1-204ENST00000399237 EIF3AQ14152 1382 aaKnown RBP30.88■■■□□ 2.53
RUNX1-204ENST00000399237 ALS2Q96Q42 1657 aa30.87■■■□□ 2.53
RUNX1-204ENST00000399237 ATRNO75882 1429 aa30.86■■■□□ 2.53
RUNX1-204ENST00000399237 SBNO1A3KN83 1393 aa30.85■■■□□ 2.53
RUNX1-204ENST00000399237 NBPF8Q3BBV2 869 aa30.85■■■□□ 2.53
RUNX1-204ENST00000399237 BCL9LQ86UU0 1499 aa30.83■■■□□ 2.53
RUNX1-204ENST00000399237 CDK19Q9BWU1 502 aa30.82■■■□□ 2.52
RUNX1-204ENST00000399237 CRYBG1Q9Y4K1 1723 aa30.81■■■□□ 2.52
RUNX1-204ENST00000399237 NUDT16Q96DE0 195 aaKnown RBP30.81■■■□□ 2.52
RUNX1-204ENST00000399237 CENPJQ9HC77 1338 aaPredicted RBP30.8■■■□□ 2.52
RUNX1-204ENST00000399237 PSME1Q06323 249 aa30.8■■■□□ 2.52
RUNX1-204ENST00000399237 CABLES1Q8TDN4 633 aa30.78■■■□□ 2.52
RUNX1-204ENST00000399237 ROCK2O75116 1388 aaKnown RBP30.77■■■□□ 2.52
RUNX1-204ENST00000399237 ATAD2Q6PL18 1390 aa30.76■■■□□ 2.51
RUNX1-204ENST00000399237 GPRASP1Q5JY77 1395 aa30.75■■■□□ 2.51
RUNX1-204ENST00000399237 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.75■■■□□ 2.51
RUNX1-204ENST00000399237 ARHGEF10O15013 1369 aa30.74■■■□□ 2.51
RUNX1-204ENST00000399237 PLCH1Q4KWH8 1693 aa30.74■■■□□ 2.51
RUNX1-204ENST00000399237 PLEKHG5O94827 1062 aa30.73■■■□□ 2.51
RUNX1-204ENST00000399237 SLIT2O94813 1529 aa30.73■■■□□ 2.51
RUNX1-204ENST00000399237 POLR3AO14802 1390 aaPredicted RBP30.71■■■□□ 2.51
RUNX1-204ENST00000399237 HAP1P54257 671 aaPredicted RBP30.71■■■□□ 2.51
RUNX1-204ENST00000399237 LMOD2Q6P5Q4 547 aa30.71■■■□□ 2.51
RUNX1-204ENST00000399237 NGDNQ8NEJ9 315 aaKnown RBP30.71■■■□□ 2.51
RUNX1-204ENST00000399237 GJD4Q96KN9 370 aaPredicted RBP30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms