RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
COL25A1-203ENST00000399132 SBNO2Q9Y2G9 1366 aa19.93■□□□□ 0.78
COL25A1-203ENST00000399132 NEUROD2Q15784 382 aa19.92■□□□□ 0.78
COL25A1-203ENST00000399132 APAF1O14727 1248 aa19.92■□□□□ 0.78
COL25A1-203ENST00000399132 MSH5O43196 834 aa19.9■□□□□ 0.78
COL25A1-203ENST00000399132 GGNBP2Q9H3C7 697 aa19.9■□□□□ 0.78
COL25A1-203ENST00000399132 MYO3AQ8NEV4 1616 aa19.9■□□□□ 0.78
COL25A1-203ENST00000399132 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
COL25A1-203ENST00000399132 TULP4Q9NRJ4 1543 aa19.9■□□□□ 0.78
COL25A1-203ENST00000399132 BLMP54132 1417 aaPredicted RBP19.89■□□□□ 0.78
COL25A1-203ENST00000399132 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.78
COL25A1-203ENST00000399132 ARHGEF28Q8N1W1 1705 aaKnown RBP19.88■□□□□ 0.77
COL25A1-203ENST00000399132 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
COL25A1-203ENST00000399132 TXNDC2Q86VQ3 553 aa19.88■□□□□ 0.77
COL25A1-203ENST00000399132 CDK19Q9BWU1 502 aa19.88■□□□□ 0.77
COL25A1-203ENST00000399132 RRP7AQ9Y3A4 280 aaKnown RBP19.88■□□□□ 0.77
COL25A1-203ENST00000399132 MTHFSP49914 203 aa19.87■□□□□ 0.77
COL25A1-203ENST00000399132 A2ML1A8K2U0 1454 aa19.87■□□□□ 0.77
COL25A1-203ENST00000399132 CGNL1Q0VF96 1302 aa19.86■□□□□ 0.77
COL25A1-203ENST00000399132 RRP1P56182 461 aaKnown RBP19.86■□□□□ 0.77
COL25A1-203ENST00000399132 CCDC136Q96JN2 1154 aa19.86■□□□□ 0.77
COL25A1-203ENST00000399132 CABP1Q9NZU7 370 aa19.86■□□□□ 0.77
COL25A1-203ENST00000399132 AGLP35573 1532 aa19.86■□□□□ 0.77
COL25A1-203ENST00000399132 ARHGEF40Q8TER5 1519 aa19.85■□□□□ 0.77
COL25A1-203ENST00000399132 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
COL25A1-203ENST00000399132 FBLN1P23142 703 aa19.85■□□□□ 0.77
COL25A1-203ENST00000399132 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL25A1-203ENST00000399132 EXOC6Q8TAG9 804 aa19.85■□□□□ 0.77
COL25A1-203ENST00000399132 NPC1L1Q9UHC9 1359 aa19.84■□□□□ 0.77
COL25A1-203ENST00000399132 ZFYVE9O95405 1425 aa19.84■□□□□ 0.77
COL25A1-203ENST00000399132 ALKQ9UM73 1620 aa19.84■□□□□ 0.77
COL25A1-203ENST00000399132 A0A1W2PP64 1363 aa19.84■□□□□ 0.77
COL25A1-203ENST00000399132 NUTM2FA1L443 756 aa19.83■□□□□ 0.77
COL25A1-203ENST00000399132 PDE3BQ13370 1112 aa19.83■□□□□ 0.77
COL25A1-203ENST00000399132 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
COL25A1-203ENST00000399132 NCKAP5LQ9HCH0 1330 aa19.83■□□□□ 0.76
COL25A1-203ENST00000399132 PTPRMP28827 1452 aa19.83■□□□□ 0.76
COL25A1-203ENST00000399132 EIF5BO60841 1220 aaKnown RBP19.82■□□□□ 0.76
COL25A1-203ENST00000399132 DMRT2Q9Y5R5 561 aa19.82■□□□□ 0.76
COL25A1-203ENST00000399132 RNF123Q5XPI4 1314 aa19.81■□□□□ 0.76
COL25A1-203ENST00000399132 METP08581 1390 aa19.81■□□□□ 0.76
COL25A1-203ENST00000399132 ERICH6BQ5W0A0 696 aa19.81■□□□□ 0.76
COL25A1-203ENST00000399132 ANKRD36BQ8N2N9 1353 aa19.8■□□□□ 0.76
COL25A1-203ENST00000399132 PPM1GO15355 546 aaPredicted RBP19.8■□□□□ 0.76
COL25A1-203ENST00000399132 GOLGA2Q08379 1002 aa19.8■□□□□ 0.76
COL25A1-203ENST00000399132 REREQ9P2R6 1566 aa19.79■□□□□ 0.76
COL25A1-203ENST00000399132 TNRQ92752 1358 aa19.79■□□□□ 0.76
COL25A1-203ENST00000399132 SLC26A8Q96RN1 970 aa19.79■□□□□ 0.76
COL25A1-203ENST00000399132 SPATA31D1Q6ZQQ2 1576 aa19.78■□□□□ 0.76
COL25A1-203ENST00000399132 C20orf194Q5TEA3 1177 aa19.77■□□□□ 0.76
COL25A1-203ENST00000399132 U2SURPO15042 1029 aaKnown RBP19.77■□□□□ 0.76
COL25A1-203ENST00000399132 U2AF1L5P0DN76 240 aaPredicted RBP19.76■□□□□ 0.75
COL25A1-203ENST00000399132 U2AF1Q01081 240 aaKnown RBP eCLIP19.76■□□□□ 0.75
COL25A1-203ENST00000399132 DUSP27Q5VZP5 1158 aa19.76■□□□□ 0.75
COL25A1-203ENST00000399132 TERF2IPQ9NYB0 399 aa19.76■□□□□ 0.75
COL25A1-203ENST00000399132 FYB1O15117 783 aa19.75■□□□□ 0.75
COL25A1-203ENST00000399132 LTKP29376 864 aa19.75■□□□□ 0.75
COL25A1-203ENST00000399132 HDGFL2Q7Z4V5 671 aaPredicted RBP19.74■□□□□ 0.75
COL25A1-203ENST00000399132 CFAP53Q96M91 514 aa19.73■□□□□ 0.75
COL25A1-203ENST00000399132 DEKP35659 375 aaKnown RBP19.73■□□□□ 0.75
COL25A1-203ENST00000399132 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.73■□□□□ 0.75
COL25A1-203ENST00000399132 POLR3AO14802 1390 aaPredicted RBP19.72■□□□□ 0.75
COL25A1-203ENST00000399132 TCP11L2Q8N4U5 519 aa19.72■□□□□ 0.75
COL25A1-203ENST00000399132 CRBNQ96SW2 442 aa19.72■□□□□ 0.75
COL25A1-203ENST00000399132 ZNF521Q96K83 1311 aa19.72■□□□□ 0.75
COL25A1-203ENST00000399132 ATAD2Q6PL18 1390 aa19.71■□□□□ 0.75
COL25A1-203ENST00000399132 ZRANB1Q9UGI0 708 aa19.71■□□□□ 0.75
COL25A1-203ENST00000399132 SLFN5Q08AF3 891 aa19.71■□□□□ 0.75
COL25A1-203ENST00000399132 SKAP1Q86WV1 359 aa19.69■□□□□ 0.74
COL25A1-203ENST00000399132 WWC1Q8IX03 1113 aa19.68■□□□□ 0.74
COL25A1-203ENST00000399132 PUS7Q96PZ0 661 aaKnown RBP19.68■□□□□ 0.74
COL25A1-203ENST00000399132 BCAR3O75815 825 aa19.68■□□□□ 0.74
COL25A1-203ENST00000399132 CD163L1Q9NR16 1453 aa19.68■□□□□ 0.74
COL25A1-203ENST00000399132 INSRP06213 1382 aa19.68■□□□□ 0.74
COL25A1-203ENST00000399132 ABCC11Q96J66 1382 aa19.68■□□□□ 0.74
COL25A1-203ENST00000399132 TMEM2Q9UHN6 1383 aa19.68■□□□□ 0.74
COL25A1-203ENST00000399132 WASLO00401 505 aaPredicted RBP19.67■□□□□ 0.74
COL25A1-203ENST00000399132 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
COL25A1-203ENST00000399132 RUNDC1Q96C34 613 aa19.67■□□□□ 0.74
COL25A1-203ENST00000399132 NME9Q86XW9 330 aa19.66■□□□□ 0.74
COL25A1-203ENST00000399132 NUDT16Q96DE0 195 aaKnown RBP19.66■□□□□ 0.74
COL25A1-203ENST00000399132 SOX12O15370 315 aa19.64■□□□□ 0.73
COL25A1-203ENST00000399132 FANCIQ9NVI1 1328 aa19.63■□□□□ 0.73
COL25A1-203ENST00000399132 NRXN3Q9Y4C0 1643 aa19.63■□□□□ 0.73
COL25A1-203ENST00000399132 BCL2L13Q9BXK5 485 aa19.63■□□□□ 0.73
COL25A1-203ENST00000399132 ROBO2Q9HCK4 1378 aa19.63■□□□□ 0.73
COL25A1-203ENST00000399132 PPIP5K1Q6PFW1 1433 aa19.62■□□□□ 0.73
COL25A1-203ENST00000399132 UBE2Q2Q8WVN8 375 aa19.62■□□□□ 0.73
COL25A1-203ENST00000399132 E9PSI1 815 aa19.61■□□□□ 0.73
COL25A1-203ENST00000399132 EID1Q9Y6B2 187 aa19.61■□□□□ 0.73
COL25A1-203ENST00000399132 SHPRHQ149N8 1683 aa19.61■□□□□ 0.73
COL25A1-203ENST00000399132 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
COL25A1-203ENST00000399132 EMILIN1Q9Y6C2 1016 aa19.6■□□□□ 0.73
COL25A1-203ENST00000399132 NSD2O96028 1365 aa19.6■□□□□ 0.73
COL25A1-203ENST00000399132 NINLQ9Y2I6 1382 aa19.6■□□□□ 0.73
COL25A1-203ENST00000399132 RBM33Q96EV2 1170 aaKnown RBP19.6■□□□□ 0.73
COL25A1-203ENST00000399132 RRS1Q15050 365 aaKnown RBP19.6■□□□□ 0.73
COL25A1-203ENST00000399132 FRAT1Q92837 279 aaPredicted RBP19.6■□□□□ 0.73
COL25A1-203ENST00000399132 HMOX1P09601 288 aa19.59■□□□□ 0.73
COL25A1-203ENST00000399132 PRR36Q9H6K5 1346 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms