RNA–Protein interactions for RNA: ENST00000398795.6

TNFSF11-203, Transcript of TNF superfamily member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF11, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-203ENST00000398795 RGS3P49796 1198 aa25.41■■□□□ 1.66
TNFSF11-203ENST00000398795 NCBP3Q53F19 620 aaKnown RBP25.4■■□□□ 1.66
TNFSF11-203ENST00000398795 MLH3Q9UHC1 1453 aa25.4■■□□□ 1.66
TNFSF11-203ENST00000398795 CLUAP1Q96AJ1 413 aa25.39■■□□□ 1.66
TNFSF11-203ENST00000398795 PPLO60437 1756 aa25.39■■□□□ 1.66
TNFSF11-203ENST00000398795 TRAK1Q9UPV9 953 aa25.39■■□□□ 1.65
TNFSF11-203ENST00000398795 QRICH2Q9H0J4 1663 aa25.39■■□□□ 1.65
TNFSF11-203ENST00000398795 POGZQ7Z3K3 1410 aa25.38■■□□□ 1.65
TNFSF11-203ENST00000398795 MAPK8IP3Q9UPT6 1336 aa25.38■■□□□ 1.65
TNFSF11-203ENST00000398795 WDR63Q8IWG1 891 aa25.38■■□□□ 1.65
TNFSF11-203ENST00000398795 IGHDP01880 384 aa25.37■■□□□ 1.65
TNFSF11-203ENST00000398795 SLC12A5Q9H2X9 1139 aa25.37■■□□□ 1.65
TNFSF11-203ENST00000398795 FRMPD1Q5SYB0 1578 aa25.37■■□□□ 1.65
TNFSF11-203ENST00000398795 CCDC27Q2M243 656 aa25.37■■□□□ 1.65
TNFSF11-203ENST00000398795 CFAP74Q9C0B2 1584 aa25.36■■□□□ 1.65
TNFSF11-203ENST00000398795 CHGAP10645 457 aaKnown RBP25.36■■□□□ 1.65
TNFSF11-203ENST00000398795 CANXP27824 592 aaKnown RBP25.35■■□□□ 1.65
TNFSF11-203ENST00000398795 NSD2O96028 1365 aa25.35■■□□□ 1.65
TNFSF11-203ENST00000398795 HECW2Q9P2P5 1572 aa25.35■■□□□ 1.65
TNFSF11-203ENST00000398795 NFKBIBQ15653 356 aa25.34■■□□□ 1.65
TNFSF11-203ENST00000398795 CFAP53Q96M91 514 aa25.34■■□□□ 1.65
TNFSF11-203ENST00000398795 RARSP54136 660 aaKnown RBP25.33■■□□□ 1.65
TNFSF11-203ENST00000398795 TCP11L2Q8N4U5 519 aa25.33■■□□□ 1.65
TNFSF11-203ENST00000398795 ABCC3O15438 1527 aa25.32■■□□□ 1.64
TNFSF11-203ENST00000398795 ZMYM3Q14202 1370 aa25.31■■□□□ 1.64
TNFSF11-203ENST00000398795 PANK1Q8TE04 598 aa25.31■■□□□ 1.64
TNFSF11-203ENST00000398795 COG6Q9Y2V7 657 aa25.31■■□□□ 1.64
TNFSF11-203ENST00000398795 SLC4A3P48751 1232 aa25.31■■□□□ 1.64
TNFSF11-203ENST00000398795 ANKRD36BQ8N2N9 1353 aa25.3■■□□□ 1.64
TNFSF11-203ENST00000398795 MTHFSP49914 203 aa25.29■■□□□ 1.64
TNFSF11-203ENST00000398795 PMFBP1Q8TBY8 1022 aa25.29■■□□□ 1.64
TNFSF11-203ENST00000398795 EVC2Q86UK5 1308 aa25.29■■□□□ 1.64
TNFSF11-203ENST00000398795 TMEM132EQ6IEE7 984 aa25.28■■□□□ 1.64
TNFSF11-203ENST00000398795 CD109Q6YHK3 1445 aa25.28■■□□□ 1.64
TNFSF11-203ENST00000398795 GLI2P10070 1586 aa25.27■■□□□ 1.64
TNFSF11-203ENST00000398795 TNNT2P45379 298 aaPredicted RBP25.27■■□□□ 1.64
TNFSF11-203ENST00000398795 GGT6Q6P531 493 aa25.27■■□□□ 1.64
TNFSF11-203ENST00000398795 RRP7AQ9Y3A4 280 aaKnown RBP25.26■■□□□ 1.63
TNFSF11-203ENST00000398795 FRAT1Q92837 279 aaPredicted RBP25.25■■□□□ 1.63
TNFSF11-203ENST00000398795 TULP4Q9NRJ4 1543 aa25.25■■□□□ 1.63
TNFSF11-203ENST00000398795 USP19O94966 1318 aa25.25■■□□□ 1.63
TNFSF11-203ENST00000398795 VGFO15240 615 aaPredicted RBP25.25■■□□□ 1.63
TNFSF11-203ENST00000398795 GSE1Q14687 1217 aa25.25■■□□□ 1.63
TNFSF11-203ENST00000398795 NEUROD2Q15784 382 aa25.25■■□□□ 1.63
TNFSF11-203ENST00000398795 MYH16Q9H6N6 1097 aa25.25■■□□□ 1.63
TNFSF11-203ENST00000398795 VIRMAQ69YN4 1812 aaKnown RBP25.24■■□□□ 1.63
TNFSF11-203ENST00000398795 PIK3C2BO00750 1634 aa25.24■■□□□ 1.63
TNFSF11-203ENST00000398795 NPM1P06748 294 aaKnown RBP eCLIP25.24■■□□□ 1.63
TNFSF11-203ENST00000398795 NEXMIFQ5QGS0 1516 aa25.22■■□□□ 1.63
TNFSF11-203ENST00000398795 CAMSAP1Q5T5Y3 1602 aa25.22■■□□□ 1.63
TNFSF11-203ENST00000398795 ADGRB2O60241 1585 aa25.22■■□□□ 1.63
TNFSF11-203ENST00000398795 CT47B1P0C2W7 299 aaPredicted RBP25.21■■□□□ 1.63
TNFSF11-203ENST00000398795 ARHGEF28Q8N1W1 1705 aaKnown RBP25.2■■□□□ 1.63
TNFSF11-203ENST00000398795 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.62
TNFSF11-203ENST00000398795 ZFYVE9O95405 1425 aa25.19■■□□□ 1.62
TNFSF11-203ENST00000398795 RLBP1P12271 317 aa25.18■■□□□ 1.62
TNFSF11-203ENST00000398795 PCDHB15Q9Y5E8 787 aa25.17■■□□□ 1.62
TNFSF11-203ENST00000398795 ABCC11Q96J66 1382 aa25.17■■□□□ 1.62
TNFSF11-203ENST00000398795 U2AF1L5P0DN76 240 aaPredicted RBP25.16■■□□□ 1.62
TNFSF11-203ENST00000398795 U2AF1Q01081 240 aaKnown RBP eCLIP25.16■■□□□ 1.62
TNFSF11-203ENST00000398795 NLRP1Q9C000 1473 aa25.16■■□□□ 1.62
TNFSF11-203ENST00000398795 RWDD1Q9H446 243 aaPredicted RBP25.15■■□□□ 1.62
TNFSF11-203ENST00000398795 NEO1Q92859 1461 aa25.15■■□□□ 1.62
TNFSF11-203ENST00000398795 SIGLEC1Q9BZZ2 1709 aa25.14■■□□□ 1.62
TNFSF11-203ENST00000398795 BECN1Q14457 450 aa25.14■■□□□ 1.62
TNFSF11-203ENST00000398795 SEC24BO95487 1268 aa25.12■■□□□ 1.61
TNFSF11-203ENST00000398795 MVPQ14764 893 aaKnown RBP25.12■■□□□ 1.61
TNFSF11-203ENST00000398795 ZKSCAN2Q63HK3 967 aa25.11■■□□□ 1.61
TNFSF11-203ENST00000398795 CABP2Q9NPB3 220 aa25.11■■□□□ 1.61
TNFSF11-203ENST00000398795 TNNQ9UQP3 1299 aa25.11■■□□□ 1.61
TNFSF11-203ENST00000398795 MED14O60244 1454 aa25.11■■□□□ 1.61
TNFSF11-203ENST00000398795 A0A1W2PP64 1363 aa25.11■■□□□ 1.61
TNFSF11-203ENST00000398795 BCL2L13Q9BXK5 485 aa25.11■■□□□ 1.61
TNFSF11-203ENST00000398795 PDZRN3Q9UPQ7 1066 aa25.11■■□□□ 1.61
TNFSF11-203ENST00000398795 IL27Q8NEV9 243 aa25.1■■□□□ 1.61
TNFSF11-203ENST00000398795 FRAT2O75474 233 aaPredicted RBP25.1■■□□□ 1.61
TNFSF11-203ENST00000398795 UPF2Q9HAU5 1272 aaKnown RBP25.1■■□□□ 1.61
TNFSF11-203ENST00000398795 SLC52A1Q9NWF4 448 aa25.1■■□□□ 1.61
TNFSF11-203ENST00000398795 PLEKHF1Q96S99 279 aa25.09■■□□□ 1.61
TNFSF11-203ENST00000398795 COL3A1P02461 1466 aaPredicted RBP25.09■■□□□ 1.61
TNFSF11-203ENST00000398795 ATAD2Q6PL18 1390 aa25.09■■□□□ 1.61
TNFSF11-203ENST00000398795 DIP2CQ9Y2E4 1556 aa25.08■■□□□ 1.61
TNFSF11-203ENST00000398795 IL16Q14005 1332 aa25.07■■□□□ 1.6
TNFSF11-203ENST00000398795 DZIP1LQ8IYY4 767 aaKnown RBP25.07■■□□□ 1.6
TNFSF11-203ENST00000398795 TBC1D32Q96NH3 1257 aa25.06■■□□□ 1.6
TNFSF11-203ENST00000398795 IDI1Q13907 227 aa25.05■■□□□ 1.6
TNFSF11-203ENST00000398795 NUTM2DQ5VT03 806 aaPredicted RBP25.05■■□□□ 1.6
TNFSF11-203ENST00000398795 FTSJ3Q8IY81 847 aaKnown RBP25.05■■□□□ 1.6
TNFSF11-203ENST00000398795 CFAP65Q6ZU64 1925 aaKnown RBP25.05■■□□□ 1.6
TNFSF11-203ENST00000398795 TMPOP42166 694 aaKnown RBP25.04■■□□□ 1.6
TNFSF11-203ENST00000398795 PTPRMP28827 1452 aa25.04■■□□□ 1.6
TNFSF11-203ENST00000398795 TERF2IPQ9NYB0 399 aa25.03■■□□□ 1.6
TNFSF11-203ENST00000398795 SRPK2P78362 688 aaKnown RBP25.03■■□□□ 1.6
TNFSF11-203ENST00000398795 TRIM35Q9UPQ4 493 aa25.02■■□□□ 1.6
TNFSF11-203ENST00000398795 RAPGEF3O95398 923 aa25.01■■□□□ 1.59
TNFSF11-203ENST00000398795 HDAC1Q13547 482 aaPredicted RBP25.01■■□□□ 1.59
TNFSF11-203ENST00000398795 SMC4Q9NTJ3 1288 aa25.01■■□□□ 1.59
TNFSF11-203ENST00000398795 TSR2Q969E8 191 aaKnown RBP25■■□□□ 1.59
TNFSF11-203ENST00000398795 CLTCQ00610 1675 aaKnown RBP25■■□□□ 1.59
TNFSF11-203ENST00000398795 U2SURPO15042 1029 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms