RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
COL6A2-203ENST00000397763 ITPRIPQ8IWB1 547 aa17.5■□□□□ 0.39
COL6A2-203ENST00000397763 RRAGDQ9NQL2 400 aaPredicted RBP17.5■□□□□ 0.39
COL6A2-203ENST00000397763 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
COL6A2-203ENST00000397763 NPC1L1Q9UHC9 1359 aa17.49■□□□□ 0.39
COL6A2-203ENST00000397763 NOS1P29475 1434 aa17.49■□□□□ 0.39
COL6A2-203ENST00000397763 EXOSC9Q06265 439 aaKnown RBP17.49■□□□□ 0.39
COL6A2-203ENST00000397763 TBC1D32Q96NH3 1257 aa17.49■□□□□ 0.39
COL6A2-203ENST00000397763 TRPM2O94759 1503 aa17.49■□□□□ 0.39
COL6A2-203ENST00000397763 RWDD1Q9H446 243 aaPredicted RBP17.49■□□□□ 0.39
COL6A2-203ENST00000397763 PANK2Q9BZ23 570 aa17.48■□□□□ 0.39
COL6A2-203ENST00000397763 GGNBP2Q9H3C7 697 aa17.48■□□□□ 0.39
COL6A2-203ENST00000397763 ANTXR1Q9H6X2 564 aa17.48■□□□□ 0.39
COL6A2-203ENST00000397763 KDM5AP29375 1690 aaKnown RBP17.48■□□□□ 0.39
COL6A2-203ENST00000397763 NAP1L5Q96NT1 182 aaPredicted RBP17.48■□□□□ 0.39
COL6A2-203ENST00000397763 CLASP1Q7Z460 1538 aa17.48■□□□□ 0.39
COL6A2-203ENST00000397763 FBLN1P23142 703 aa17.47■□□□□ 0.39
COL6A2-203ENST00000397763 CHD1O14646 1710 aa17.47■□□□□ 0.39
COL6A2-203ENST00000397763 PTPRTO14522 1441 aa17.47■□□□□ 0.39
COL6A2-203ENST00000397763 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
COL6A2-203ENST00000397763 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
COL6A2-203ENST00000397763 ABCC1P33527 1531 aa17.47■□□□□ 0.39
COL6A2-203ENST00000397763 SPHKAPQ2M3C7 1700 aa17.46■□□□□ 0.39
COL6A2-203ENST00000397763 CFAP53Q96M91 514 aa17.46■□□□□ 0.39
COL6A2-203ENST00000397763 MVPQ14764 893 aaKnown RBP17.45■□□□□ 0.38
COL6A2-203ENST00000397763 DZIP1LQ8IYY4 767 aaKnown RBP17.45■□□□□ 0.38
COL6A2-203ENST00000397763 NLRP1Q9C000 1473 aa17.45■□□□□ 0.38
COL6A2-203ENST00000397763 ZKSCAN2Q63HK3 967 aa17.45■□□□□ 0.38
COL6A2-203ENST00000397763 CEP152O94986 1710 aa17.45■□□□□ 0.38
COL6A2-203ENST00000397763 SSH1Q8WYL5 1049 aa17.44■□□□□ 0.38
COL6A2-203ENST00000397763 TRIM27P14373 513 aa17.44■□□□□ 0.38
COL6A2-203ENST00000397763 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
COL6A2-203ENST00000397763 SLC24A1O60721 1099 aa17.43■□□□□ 0.38
COL6A2-203ENST00000397763 ABCA6Q8N139 1617 aa17.42■□□□□ 0.38
COL6A2-203ENST00000397763 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
COL6A2-203ENST00000397763 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
COL6A2-203ENST00000397763 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
COL6A2-203ENST00000397763 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
COL6A2-203ENST00000397763 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
COL6A2-203ENST00000397763 SRPK2P78362 688 aaKnown RBP17.41■□□□□ 0.38
COL6A2-203ENST00000397763 ELL2O00472 640 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-203ENST00000397763 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL6A2-203ENST00000397763 STAC3Q96MF2 364 aa17.41■□□□□ 0.38
COL6A2-203ENST00000397763 C1orf115Q9H7X2 142 aa17.41■□□□□ 0.38
COL6A2-203ENST00000397763 ZCCHC11Q5TAX3 1644 aaKnown RBP17.4■□□□□ 0.38
COL6A2-203ENST00000397763 TMEM57Q8N5G2 664 aa17.4■□□□□ 0.38
COL6A2-203ENST00000397763 MCM4P33991 863 aa17.39■□□□□ 0.37
COL6A2-203ENST00000397763 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
COL6A2-203ENST00000397763 FANCAO15360 1455 aa17.38■□□□□ 0.37
COL6A2-203ENST00000397763 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
COL6A2-203ENST00000397763 NGEFQ8N5V2 710 aa17.38■□□□□ 0.37
COL6A2-203ENST00000397763 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
COL6A2-203ENST00000397763 MINK1Q8N4C8 1332 aaPredicted RBP17.37■□□□□ 0.37
COL6A2-203ENST00000397763 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
COL6A2-203ENST00000397763 MAP3K4Q9Y6R4 1608 aa17.37■□□□□ 0.37
COL6A2-203ENST00000397763 GOLGA6L3A6NEY3 463 aa17.36■□□□□ 0.37
COL6A2-203ENST00000397763 TMPOP42166 694 aaKnown RBP17.36■□□□□ 0.37
COL6A2-203ENST00000397763 RIPK4P57078 832 aa17.36■□□□□ 0.37
COL6A2-203ENST00000397763 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
COL6A2-203ENST00000397763 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
COL6A2-203ENST00000397763 NINLQ9Y2I6 1382 aa17.36■□□□□ 0.37
COL6A2-203ENST00000397763 TRAK2O60296 914 aa17.36■□□□□ 0.37
COL6A2-203ENST00000397763 ATP7AQ04656 1500 aa17.35■□□□□ 0.37
COL6A2-203ENST00000397763 ADGRL1O94910 1474 aa17.35■□□□□ 0.37
COL6A2-203ENST00000397763 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
COL6A2-203ENST00000397763 VSIG10Q8N0Z9 540 aa17.34■□□□□ 0.37
COL6A2-203ENST00000397763 SHPRHQ149N8 1683 aa17.34■□□□□ 0.37
COL6A2-203ENST00000397763 TET3O43151 1660 aa17.33■□□□□ 0.36
COL6A2-203ENST00000397763 RTEL1-TNFRSF6BF6WH68 1400 aa17.33■□□□□ 0.36
COL6A2-203ENST00000397763 HSCBQ8IWL3 235 aa17.32■□□□□ 0.36
COL6A2-203ENST00000397763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.32■□□□□ 0.36
COL6A2-203ENST00000397763 ZNF518AQ6AHZ1 1483 aa17.32■□□□□ 0.36
COL6A2-203ENST00000397763 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
COL6A2-203ENST00000397763 IQSEC2Q5JU85 1478 aa17.32■□□□□ 0.36
COL6A2-203ENST00000397763 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
COL6A2-203ENST00000397763 EVC2Q86UK5 1308 aa17.32■□□□□ 0.36
COL6A2-203ENST00000397763 HMOX1P09601 288 aa17.32■□□□□ 0.36
COL6A2-203ENST00000397763 CHMP5Q9NZZ3 219 aa17.31■□□□□ 0.36
COL6A2-203ENST00000397763 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
COL6A2-203ENST00000397763 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
COL6A2-203ENST00000397763 CD109Q6YHK3 1445 aa17.3■□□□□ 0.36
COL6A2-203ENST00000397763 VIRMAQ69YN4 1812 aaKnown RBP17.3■□□□□ 0.36
COL6A2-203ENST00000397763 CCDC27Q2M243 656 aa17.3■□□□□ 0.36
COL6A2-203ENST00000397763 CD2BP2O95400 341 aaKnown RBP17.29■□□□□ 0.36
COL6A2-203ENST00000397763 HSP90AA1P07900 732 aaKnown RBP17.29■□□□□ 0.36
COL6A2-203ENST00000397763 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
COL6A2-203ENST00000397763 PKNOX2Q96KN3 472 aa17.28■□□□□ 0.36
COL6A2-203ENST00000397763 MYOM2P54296 1465 aa17.28■□□□□ 0.36
COL6A2-203ENST00000397763 RAPGEF3O95398 923 aa17.28■□□□□ 0.36
COL6A2-203ENST00000397763 HSP90AB1P08238 724 aaKnown RBP17.28■□□□□ 0.36
COL6A2-203ENST00000397763 A0A1W2PP64 1363 aa17.27■□□□□ 0.36
COL6A2-203ENST00000397763 FYB1O15117 783 aa17.27■□□□□ 0.36
COL6A2-203ENST00000397763 SHROOM2Q13796 1616 aa17.27■□□□□ 0.36
COL6A2-203ENST00000397763 ZBTB40Q9NUA8 1239 aa17.27■□□□□ 0.36
COL6A2-203ENST00000397763 KIF1BO60333 1816 aa17.27■□□□□ 0.35
COL6A2-203ENST00000397763 GLIPR1L2Q4G1C9 344 aa17.27■□□□□ 0.35
COL6A2-203ENST00000397763 NPATQ14207 1427 aa17.26■□□□□ 0.35
COL6A2-203ENST00000397763 TSPYL6Q8N831 410 aa17.26■□□□□ 0.35
COL6A2-203ENST00000397763 HSP90AA2PQ14568 343 aaPredicted RBP17.26■□□□□ 0.35
COL6A2-203ENST00000397763 APBB1O00213 710 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms