RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 DISP3Q9P2K9 1392 aa32.76■■■□□ 2.83
TSPAN4-202ENST00000397396 PLEKHH1Q9ULM0 1364 aa32.76■■■□□ 2.83
TSPAN4-202ENST00000397396 WAPLQ7Z5K2 1190 aa32.76■■■□□ 2.83
TSPAN4-202ENST00000397396 SAFB2Q14151 953 aaKnown RBP eCLIP32.75■■■□□ 2.83
TSPAN4-202ENST00000397396 PUS7Q96PZ0 661 aaKnown RBP32.74■■■□□ 2.83
TSPAN4-202ENST00000397396 ADGRB2O60241 1585 aa32.73■■■□□ 2.83
TSPAN4-202ENST00000397396 C11orf95C9JLR9 678 aaPredicted RBP32.72■■■□□ 2.83
TSPAN4-202ENST00000397396 MINK1Q8N4C8 1332 aaPredicted RBP32.71■■■□□ 2.83
TSPAN4-202ENST00000397396 TULP4Q9NRJ4 1543 aa32.7■■■□□ 2.82
TSPAN4-202ENST00000397396 NCOA3Q9Y6Q9 1424 aa32.66■■■□□ 2.82
TSPAN4-202ENST00000397396 POLR3GLQ9BT43 218 aa32.64■■■□□ 2.82
TSPAN4-202ENST00000397396 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.64■■■□□ 2.82
TSPAN4-202ENST00000397396 ATAD2Q6PL18 1390 aa32.63■■■□□ 2.81
TSPAN4-202ENST00000397396 WASLO00401 505 aaPredicted RBP32.61■■■□□ 2.81
TSPAN4-202ENST00000397396 PROSER2Q86WR7 435 aaPredicted RBP32.61■■■□□ 2.81
TSPAN4-202ENST00000397396 ADGRL3Q9HAR2 1447 aa32.61■■■□□ 2.81
TSPAN4-202ENST00000397396 SRPK2P78362 688 aaKnown RBP32.6■■■□□ 2.81
TSPAN4-202ENST00000397396 NINLQ9Y2I6 1382 aa32.6■■■□□ 2.81
TSPAN4-202ENST00000397396 STRCP1A6NGW2 1772 aa32.59■■■□□ 2.81
TSPAN4-202ENST00000397396 CDC42BPGQ6DT37 1551 aa32.58■■■□□ 2.81
TSPAN4-202ENST00000397396 CDK19Q9BWU1 502 aa32.58■■■□□ 2.81
TSPAN4-202ENST00000397396 DDX10Q13206 875 aaKnown RBP32.56■■■□□ 2.8
TSPAN4-202ENST00000397396 NALCNQ8IZF0 1738 aa32.55■■■□□ 2.8
TSPAN4-202ENST00000397396 ZNF335Q9H4Z2 1342 aaPredicted RBP32.55■■■□□ 2.8
TSPAN4-202ENST00000397396 C14orf37Q86TY3 774 aa32.53■■■□□ 2.8
TSPAN4-202ENST00000397396 CABP2Q9NPB3 220 aa32.52■■■□□ 2.8
TSPAN4-202ENST00000397396 TMEM94Q12767 1356 aa32.52■■■□□ 2.8
TSPAN4-202ENST00000397396 MYOM1P52179 1685 aa32.51■■■□□ 2.79
TSPAN4-202ENST00000397396 DCCP43146 1447 aa32.5■■■□□ 2.79
TSPAN4-202ENST00000397396 ANKARQ7Z5J8 1434 aa32.5■■■□□ 2.79
TSPAN4-202ENST00000397396 DIEXFQ68CQ4 756 aaKnown RBP32.5■■■□□ 2.79
TSPAN4-202ENST00000397396 LRRC7Q96NW7 1537 aa32.48■■■□□ 2.79
TSPAN4-202ENST00000397396 FMN2Q9NZ56 1722 aa32.47■■■□□ 2.79
TSPAN4-202ENST00000397396 C19orf44Q9H6X5 657 aa32.47■■■□□ 2.79
TSPAN4-202ENST00000397396 ATP7BP35670 1465 aa32.46■■■□□ 2.79
TSPAN4-202ENST00000397396 MSH6P52701 1360 aa32.44■■■□□ 2.78
TSPAN4-202ENST00000397396 TMC1Q8TDI8 760 aa32.44■■■□□ 2.78
TSPAN4-202ENST00000397396 NUDT16Q96DE0 195 aaKnown RBP32.44■■■□□ 2.78
TSPAN4-202ENST00000397396 CCDC61Q9Y6R9 512 aa32.43■■■□□ 2.78
TSPAN4-202ENST00000397396 ITSN1Q15811 1721 aa32.43■■■□□ 2.78
TSPAN4-202ENST00000397396 RBM33Q96EV2 1170 aaKnown RBP32.41■■■□□ 2.78
TSPAN4-202ENST00000397396 TOPAZ1Q8N9V7 1692 aa32.4■■■□□ 2.78
TSPAN4-202ENST00000397396 PPIP5K1Q6PFW1 1433 aa32.39■■■□□ 2.78
TSPAN4-202ENST00000397396 ANKRD36BQ8N2N9 1353 aa32.39■■■□□ 2.78
TSPAN4-202ENST00000397396 TERF2IPQ9NYB0 399 aa32.38■■■□□ 2.77
TSPAN4-202ENST00000397396 ATF3P18847 181 aa32.37■■■□□ 2.77
TSPAN4-202ENST00000397396 PANK3Q9H999 370 aa32.37■■■□□ 2.77
TSPAN4-202ENST00000397396 XIRP1Q702N8 1843 aaKnown RBP32.36■■■□□ 2.77
TSPAN4-202ENST00000397396 PRR36Q9H6K5 1346 aa32.36■■■□□ 2.77
TSPAN4-202ENST00000397396 CADPS2Q86UW7 1296 aa32.36■■■□□ 2.77
TSPAN4-202ENST00000397396 LTBP4Q8N2S1 1624 aa32.36■■■□□ 2.77
TSPAN4-202ENST00000397396 USP32Q8NFA0 1604 aa32.36■■■□□ 2.77
TSPAN4-202ENST00000397396 HDGFL2Q7Z4V5 671 aaPredicted RBP32.35■■■□□ 2.77
TSPAN4-202ENST00000397396 SLC12A5Q9H2X9 1139 aa32.35■■■□□ 2.77
TSPAN4-202ENST00000397396 CABP1Q9NZU7 370 aa32.33■■■□□ 2.77
TSPAN4-202ENST00000397396 PLEKHG3A1L390 1219 aa32.3■■■□□ 2.76
TSPAN4-202ENST00000397396 NUTM2FA1L443 756 aa32.29■■■□□ 2.76
TSPAN4-202ENST00000397396 KNSTRNQ9Y448 316 aa32.29■■■□□ 2.76
TSPAN4-202ENST00000397396 A0A1W2PP64 1363 aa32.28■■■□□ 2.76
TSPAN4-202ENST00000397396 ZNF692Q9BU19 519 aaPredicted RBP32.27■■■□□ 2.76
TSPAN4-202ENST00000397396 CD163L1Q9NR16 1453 aa32.27■■■□□ 2.76
TSPAN4-202ENST00000397396 MST1RQ04912 1400 aa32.26■■■□□ 2.75
TSPAN4-202ENST00000397396 CPSF1Q10570 1443 aaKnown RBP32.26■■■□□ 2.75
TSPAN4-202ENST00000397396 PER1O15534 1290 aaPredicted RBP32.26■■■□□ 2.75
TSPAN4-202ENST00000397396 C1orf167Q5SNV9 1468 aa32.25■■■□□ 2.75
TSPAN4-202ENST00000397396 ANP32CO43423 234 aa32.25■■■□□ 2.75
TSPAN4-202ENST00000397396 NSD3Q9BZ95 1437 aa32.23■■■□□ 2.75
TSPAN4-202ENST00000397396 POLR3AO14802 1390 aaPredicted RBP32.23■■■□□ 2.75
TSPAN4-202ENST00000397396 KIF1AQ12756 1690 aa32.23■■■□□ 2.75
TSPAN4-202ENST00000397396 RGPD8O14715 1765 aaPredicted RBP32.22■■■□□ 2.75
TSPAN4-202ENST00000397396 KTN1Q86UP2 1357 aaKnown RBP32.22■■■□□ 2.75
TSPAN4-202ENST00000397396 NPC1L1Q9UHC9 1359 aa32.22■■■□□ 2.75
TSPAN4-202ENST00000397396 AKAP12Q02952 1782 aa32.22■■■□□ 2.75
TSPAN4-202ENST00000397396 PHF8Q9UPP1 1060 aa32.21■■■□□ 2.75
TSPAN4-202ENST00000397396 EDC4Q6P2E9 1401 aaKnown RBP32.2■■■□□ 2.75
TSPAN4-202ENST00000397396 MON2Q7Z3U7 1717 aa32.2■■■□□ 2.74
TSPAN4-202ENST00000397396 ACEP12821 1306 aa32.2■■■□□ 2.74
TSPAN4-202ENST00000397396 ESCO1Q5FWF5 840 aa32.19■■■□□ 2.74
TSPAN4-202ENST00000397396 NGDNQ8NEJ9 315 aaKnown RBP32.19■■■□□ 2.74
TSPAN4-202ENST00000397396 CARD14Q9BXL6 1004 aa32.19■■■□□ 2.74
TSPAN4-202ENST00000397396 CGNL1Q0VF96 1302 aa32.19■■■□□ 2.74
TSPAN4-202ENST00000397396 BRD4O60885 1362 aaPredicted RBP32.18■■■□□ 2.74
TSPAN4-202ENST00000397396 NSD2O96028 1365 aa32.18■■■□□ 2.74
TSPAN4-202ENST00000397396 IQSEC2Q5JU85 1478 aa32.17■■■□□ 2.74
TSPAN4-202ENST00000397396 PMFBP1Q8TBY8 1022 aa32.15■■■□□ 2.74
TSPAN4-202ENST00000397396 USP6P35125 1406 aa32.15■■■□□ 2.74
TSPAN4-202ENST00000397396 AMER1Q5JTC6 1135 aaPredicted RBP32.13■■■□□ 2.73
TSPAN4-202ENST00000397396 NRKQ7Z2Y5 1582 aa32.1■■■□□ 2.73
TSPAN4-202ENST00000397396 RALBP1Q15311 655 aa32.1■■■□□ 2.73
TSPAN4-202ENST00000397396 SLAIN2Q9P270 581 aa32.1■■■□□ 2.73
TSPAN4-202ENST00000397396 ORAI2Q96SN7 254 aa32.09■■■□□ 2.73
TSPAN4-202ENST00000397396 PRKRIP1Q9H875 184 aaPredicted RBP32.09■■■□□ 2.73
TSPAN4-202ENST00000397396 TTC21AQ8NDW8 1320 aa32.08■■■□□ 2.73
TSPAN4-202ENST00000397396 SSH2Q76I76 1423 aa32.05■■■□□ 2.72
TSPAN4-202ENST00000397396 KIF20BQ96Q89 1820 aa32.05■■■□□ 2.72
TSPAN4-202ENST00000397396 PARD3Q8TEW0 1356 aa32.05■■■□□ 2.72
TSPAN4-202ENST00000397396 CC2D1BQ5T0F9 858 aaKnown RBP32.04■■■□□ 2.72
TSPAN4-202ENST00000397396 NPHP3Q7Z494 1330 aa32.04■■■□□ 2.72
TSPAN4-202ENST00000397396 TTC21BQ7Z4L5 1316 aa32.04■■■□□ 2.72
TSPAN4-202ENST00000397396 PSME1Q06323 249 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms