RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
HOXA3-202ENST00000396352 NFKBIBQ15653 356 aa20.33■□□□□ 0.84
HOXA3-202ENST00000396352 C14orf93Q9H972 538 aaKnown RBP20.32■□□□□ 0.84
HOXA3-202ENST00000396352 TRAK1Q9UPV9 953 aa20.32■□□□□ 0.84
HOXA3-202ENST00000396352 MORC1Q86VD1 984 aa20.31■□□□□ 0.84
HOXA3-202ENST00000396352 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
HOXA3-202ENST00000396352 SLC12A5Q9H2X9 1139 aa20.31■□□□□ 0.84
HOXA3-202ENST00000396352 CLUAP1Q96AJ1 413 aa20.31■□□□□ 0.84
HOXA3-202ENST00000396352 HECW2Q9P2P5 1572 aa20.31■□□□□ 0.84
HOXA3-202ENST00000396352 PANK1Q8TE04 598 aa20.31■□□□□ 0.84
HOXA3-202ENST00000396352 RUNDC1Q96C34 613 aa20.3■□□□□ 0.84
HOXA3-202ENST00000396352 COG6Q9Y2V7 657 aa20.29■□□□□ 0.84
HOXA3-202ENST00000396352 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
HOXA3-202ENST00000396352 GLI2P10070 1586 aa20.29■□□□□ 0.84
HOXA3-202ENST00000396352 ARHGEF28Q8N1W1 1705 aaKnown RBP20.29■□□□□ 0.84
HOXA3-202ENST00000396352 TNNT2P45379 298 aaPredicted RBP20.28■□□□□ 0.84
HOXA3-202ENST00000396352 CHGAP10645 457 aaKnown RBP20.28■□□□□ 0.84
HOXA3-202ENST00000396352 USP19O94966 1318 aa20.28■□□□□ 0.84
HOXA3-202ENST00000396352 SIGLEC1Q9BZZ2 1709 aa20.27■□□□□ 0.84
HOXA3-202ENST00000396352 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.84
HOXA3-202ENST00000396352 RARSP54136 660 aaKnown RBP20.27■□□□□ 0.84
HOXA3-202ENST00000396352 TCP11L2Q8N4U5 519 aa20.27■□□□□ 0.84
HOXA3-202ENST00000396352 POGZQ7Z3K3 1410 aa20.27■□□□□ 0.83
HOXA3-202ENST00000396352 TULP4Q9NRJ4 1543 aa20.26■□□□□ 0.83
HOXA3-202ENST00000396352 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
HOXA3-202ENST00000396352 TMEM132EQ6IEE7 984 aa20.26■□□□□ 0.83
HOXA3-202ENST00000396352 ABCC3O15438 1527 aa20.26■□□□□ 0.83
HOXA3-202ENST00000396352 CFAP74Q9C0B2 1584 aa20.26■□□□□ 0.83
HOXA3-202ENST00000396352 NEUROD2Q15784 382 aa20.26■□□□□ 0.83
HOXA3-202ENST00000396352 CAMSAP1Q5T5Y3 1602 aa20.26■□□□□ 0.83
HOXA3-202ENST00000396352 PIK3C2BO00750 1634 aa20.25■□□□□ 0.83
HOXA3-202ENST00000396352 MLH3Q9UHC1 1453 aa20.25■□□□□ 0.83
HOXA3-202ENST00000396352 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
HOXA3-202ENST00000396352 IL27Q8NEV9 243 aa20.25■□□□□ 0.83
HOXA3-202ENST00000396352 WDR63Q8IWG1 891 aa20.24■□□□□ 0.83
HOXA3-202ENST00000396352 ADGRB2O60241 1585 aa20.24■□□□□ 0.83
HOXA3-202ENST00000396352 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
HOXA3-202ENST00000396352 RPGRIP1LQ68CZ1 1315 aa20.23■□□□□ 0.83
HOXA3-202ENST00000396352 MTHFSP49914 203 aa20.23■□□□□ 0.83
HOXA3-202ENST00000396352 GSE1Q14687 1217 aa20.23■□□□□ 0.83
HOXA3-202ENST00000396352 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
HOXA3-202ENST00000396352 CCDC27Q2M243 656 aa20.22■□□□□ 0.83
HOXA3-202ENST00000396352 RLBP1P12271 317 aa20.22■□□□□ 0.83
HOXA3-202ENST00000396352 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
HOXA3-202ENST00000396352 SEC24BO95487 1268 aa20.21■□□□□ 0.83
HOXA3-202ENST00000396352 TNNQ9UQP3 1299 aa20.21■□□□□ 0.83
HOXA3-202ENST00000396352 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
HOXA3-202ENST00000396352 AAMPQ13685 434 aa20.19■□□□□ 0.82
HOXA3-202ENST00000396352 GGT6Q6P531 493 aa20.19■□□□□ 0.82
HOXA3-202ENST00000396352 NSD2O96028 1365 aa20.19■□□□□ 0.82
HOXA3-202ENST00000396352 PUS7Q96PZ0 661 aaKnown RBP20.19■□□□□ 0.82
HOXA3-202ENST00000396352 PCDHB15Q9Y5E8 787 aa20.19■□□□□ 0.82
HOXA3-202ENST00000396352 CFAP53Q96M91 514 aa20.18■□□□□ 0.82
HOXA3-202ENST00000396352 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
HOXA3-202ENST00000396352 PMFBP1Q8TBY8 1022 aa20.17■□□□□ 0.82
HOXA3-202ENST00000396352 BCL2L13Q9BXK5 485 aa20.17■□□□□ 0.82
HOXA3-202ENST00000396352 EVC2Q86UK5 1308 aa20.17■□□□□ 0.82
HOXA3-202ENST00000396352 ZMYM3Q14202 1370 aa20.17■□□□□ 0.82
HOXA3-202ENST00000396352 CD109Q6YHK3 1445 aa20.17■□□□□ 0.82
HOXA3-202ENST00000396352 FRAT2O75474 233 aaPredicted RBP20.16■□□□□ 0.82
HOXA3-202ENST00000396352 MYH16Q9H6N6 1097 aa20.13■□□□□ 0.81
HOXA3-202ENST00000396352 NUTM2DQ5VT03 806 aaPredicted RBP20.12■□□□□ 0.81
HOXA3-202ENST00000396352 ANKRD26Q9UPS8 1709 aa20.12■□□□□ 0.81
HOXA3-202ENST00000396352 COL3A1P02461 1466 aaPredicted RBP20.12■□□□□ 0.81
HOXA3-202ENST00000396352 U2AF1L5P0DN76 240 aaPredicted RBP20.11■□□□□ 0.81
HOXA3-202ENST00000396352 U2AF1Q01081 240 aaKnown RBP eCLIP20.11■□□□□ 0.81
HOXA3-202ENST00000396352 ABCC11Q96J66 1382 aa20.11■□□□□ 0.81
HOXA3-202ENST00000396352 CABP2Q9NPB3 220 aa20.11■□□□□ 0.81
HOXA3-202ENST00000396352 PDZRN3Q9UPQ7 1066 aa20.11■□□□□ 0.81
HOXA3-202ENST00000396352 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
HOXA3-202ENST00000396352 A0A1W2PP64 1363 aa20.1■□□□□ 0.81
HOXA3-202ENST00000396352 MYO5BQ9ULV0 1848 aa20.1■□□□□ 0.81
HOXA3-202ENST00000396352 DIP2CQ9Y2E4 1556 aa20.1■□□□□ 0.81
HOXA3-202ENST00000396352 MVPQ14764 893 aaKnown RBP20.09■□□□□ 0.81
HOXA3-202ENST00000396352 BRPF3Q9ULD4 1205 aa20.08■□□□□ 0.81
HOXA3-202ENST00000396352 PLEKHF1Q96S99 279 aa20.08■□□□□ 0.8
HOXA3-202ENST00000396352 RWDD1Q9H446 243 aaPredicted RBP20.07■□□□□ 0.8
HOXA3-202ENST00000396352 ZFYVE9O95405 1425 aa20.07■□□□□ 0.8
HOXA3-202ENST00000396352 ARHGAP31Q2M1Z3 1444 aa20.07■□□□□ 0.8
HOXA3-202ENST00000396352 RTN4Q9NQC3 1192 aaKnown RBP20.07■□□□□ 0.8
HOXA3-202ENST00000396352 CLTCQ00610 1675 aaKnown RBP20.07■□□□□ 0.8
HOXA3-202ENST00000396352 TBC1D32Q96NH3 1257 aa20.06■□□□□ 0.8
HOXA3-202ENST00000396352 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
HOXA3-202ENST00000396352 TSR2Q969E8 191 aaKnown RBP20.06■□□□□ 0.8
HOXA3-202ENST00000396352 PTPRMP28827 1452 aa20.06■□□□□ 0.8
HOXA3-202ENST00000396352 CT47B1P0C2W7 299 aaPredicted RBP20.05■□□□□ 0.8
HOXA3-202ENST00000396352 BECN1Q14457 450 aa20.05■□□□□ 0.8
HOXA3-202ENST00000396352 CD163L1Q9NR16 1453 aa20.05■□□□□ 0.8
HOXA3-202ENST00000396352 NPM1P06748 294 aaKnown RBP eCLIP20.05■□□□□ 0.8
HOXA3-202ENST00000396352 SAFB2Q14151 953 aaKnown RBP eCLIP20.04■□□□□ 0.8
HOXA3-202ENST00000396352 DZIP1LQ8IYY4 767 aaKnown RBP20.04■□□□□ 0.8
HOXA3-202ENST00000396352 TRIM35Q9UPQ4 493 aa20.04■□□□□ 0.8
HOXA3-202ENST00000396352 MED14O60244 1454 aa20.03■□□□□ 0.8
HOXA3-202ENST00000396352 ANTXR1Q9H6X2 564 aa20.03■□□□□ 0.8
HOXA3-202ENST00000396352 NEO1Q92859 1461 aa20.03■□□□□ 0.8
HOXA3-202ENST00000396352 TMEM131LA2VDJ0 1609 aa20.03■□□□□ 0.8
HOXA3-202ENST00000396352 TMPOP42166 694 aaKnown RBP20.02■□□□□ 0.8
HOXA3-202ENST00000396352 IDI1Q13907 227 aa20.02■□□□□ 0.8
HOXA3-202ENST00000396352 RICTORQ6R327 1708 aa20.02■□□□□ 0.8
HOXA3-202ENST00000396352 RAPGEF3O95398 923 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms