RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 CHGAP10645 457 aaKnown RBP20.61■□□□□ 0.89
PDE1C-202ENST00000396182 PANK1Q8TE04 598 aa20.61■□□□□ 0.89
PDE1C-202ENST00000396182 KIF1BO60333 1816 aa20.61■□□□□ 0.89
PDE1C-202ENST00000396182 NEUROD2Q15784 382 aa20.61■□□□□ 0.89
PDE1C-202ENST00000396182 SLC12A5Q9H2X9 1139 aa20.61■□□□□ 0.89
PDE1C-202ENST00000396182 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
PDE1C-202ENST00000396182 NOS1P29475 1434 aa20.6■□□□□ 0.89
PDE1C-202ENST00000396182 PDE3AQ14432 1141 aa20.6■□□□□ 0.89
PDE1C-202ENST00000396182 COG6Q9Y2V7 657 aa20.6■□□□□ 0.89
PDE1C-202ENST00000396182 RRP7AQ9Y3A4 280 aaKnown RBP20.6■□□□□ 0.89
PDE1C-202ENST00000396182 MORC1Q86VD1 984 aa20.59■□□□□ 0.89
PDE1C-202ENST00000396182 NRXN1Q9ULB1 1477 aa20.59■□□□□ 0.89
PDE1C-202ENST00000396182 CGNL1Q0VF96 1302 aa20.59■□□□□ 0.89
PDE1C-202ENST00000396182 MROH2AA6NES4 1674 aa20.59■□□□□ 0.89
PDE1C-202ENST00000396182 EFCAB6Q5THR3 1501 aa20.59■□□□□ 0.89
PDE1C-202ENST00000396182 BECN1Q14457 450 aa20.59■□□□□ 0.89
PDE1C-202ENST00000396182 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
PDE1C-202ENST00000396182 NSD3Q9BZ95 1437 aa20.59■□□□□ 0.89
PDE1C-202ENST00000396182 IFT172Q9UG01 1749 aa20.58■□□□□ 0.89
PDE1C-202ENST00000396182 CLUAP1Q96AJ1 413 aa20.57■□□□□ 0.88
PDE1C-202ENST00000396182 NINLQ9Y2I6 1382 aa20.57■□□□□ 0.88
PDE1C-202ENST00000396182 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
PDE1C-202ENST00000396182 PPRC1Q5VV67 1664 aaKnown RBP20.56■□□□□ 0.88
PDE1C-202ENST00000396182 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
PDE1C-202ENST00000396182 MYO3AQ8NEV4 1616 aa20.56■□□□□ 0.88
PDE1C-202ENST00000396182 TMEM132EQ6IEE7 984 aa20.56■□□□□ 0.88
PDE1C-202ENST00000396182 ANTXR1Q9H6X2 564 aa20.55■□□□□ 0.88
PDE1C-202ENST00000396182 TCP11L2Q8N4U5 519 aa20.55■□□□□ 0.88
PDE1C-202ENST00000396182 RUNDC1Q96C34 613 aa20.54■□□□□ 0.88
PDE1C-202ENST00000396182 C14orf93Q9H972 538 aaKnown RBP20.54■□□□□ 0.88
PDE1C-202ENST00000396182 RARSP54136 660 aaKnown RBP20.53■□□□□ 0.88
PDE1C-202ENST00000396182 RRAGDQ9NQL2 400 aaPredicted RBP20.53■□□□□ 0.88
PDE1C-202ENST00000396182 L1TD1Q5T7N2 865 aaKnown RBP20.53■□□□□ 0.88
PDE1C-202ENST00000396182 SHPRHQ149N8 1683 aa20.52■□□□□ 0.88
PDE1C-202ENST00000396182 KIDINS220Q9ULH0 1771 aa20.52■□□□□ 0.88
PDE1C-202ENST00000396182 TNNQ9UQP3 1299 aa20.52■□□□□ 0.88
PDE1C-202ENST00000396182 MTHFSP49914 203 aa20.52■□□□□ 0.87
PDE1C-202ENST00000396182 ADGRB3O60242 1522 aa20.51■□□□□ 0.87
PDE1C-202ENST00000396182 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
PDE1C-202ENST00000396182 SETBP1Q9Y6X0 1596 aa20.5■□□□□ 0.87
PDE1C-202ENST00000396182 RLBP1P12271 317 aa20.49■□□□□ 0.87
PDE1C-202ENST00000396182 LMTK2Q8IWU2 1503 aa20.49■□□□□ 0.87
PDE1C-202ENST00000396182 GGT6Q6P531 493 aa20.49■□□□□ 0.87
PDE1C-202ENST00000396182 BCL2L13Q9BXK5 485 aa20.49■□□□□ 0.87
PDE1C-202ENST00000396182 ASXL2Q76L83 1435 aa20.49■□□□□ 0.87
PDE1C-202ENST00000396182 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
PDE1C-202ENST00000396182 TBC1D32Q96NH3 1257 aa20.48■□□□□ 0.87
PDE1C-202ENST00000396182 PCDHB15Q9Y5E8 787 aa20.48■□□□□ 0.87
PDE1C-202ENST00000396182 NPATQ14207 1427 aa20.48■□□□□ 0.87
PDE1C-202ENST00000396182 ZMYM3Q14202 1370 aa20.48■□□□□ 0.87
PDE1C-202ENST00000396182 IQSEC2Q5JU85 1478 aa20.47■□□□□ 0.87
PDE1C-202ENST00000396182 WDR63Q8IWG1 891 aa20.47■□□□□ 0.87
PDE1C-202ENST00000396182 ADGRB1O14514 1584 aa20.47■□□□□ 0.87
PDE1C-202ENST00000396182 NUTM2DQ5VT03 806 aaPredicted RBP20.46■□□□□ 0.87
PDE1C-202ENST00000396182 TBC1D2Q9BYX2 928 aa20.46■□□□□ 0.87
PDE1C-202ENST00000396182 PODXL2Q9NZ53 605 aa20.46■□□□□ 0.87
PDE1C-202ENST00000396182 ZNF518AQ6AHZ1 1483 aa20.46■□□□□ 0.87
PDE1C-202ENST00000396182 QRICH2Q9H0J4 1663 aa20.46■□□□□ 0.87
PDE1C-202ENST00000396182 UPF2Q9HAU5 1272 aaKnown RBP20.45■□□□□ 0.86
PDE1C-202ENST00000396182 PLEKHG5O94827 1062 aa20.45■□□□□ 0.86
PDE1C-202ENST00000396182 ZC3H13Q5T200 1668 aaKnown RBP20.44■□□□□ 0.86
PDE1C-202ENST00000396182 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
PDE1C-202ENST00000396182 PPLO60437 1756 aa20.43■□□□□ 0.86
PDE1C-202ENST00000396182 CCDC27Q2M243 656 aa20.43■□□□□ 0.86
PDE1C-202ENST00000396182 CFAP53Q96M91 514 aa20.43■□□□□ 0.86
PDE1C-202ENST00000396182 FSD2A1L4K1 749 aa20.41■□□□□ 0.86
PDE1C-202ENST00000396182 U2AF1L5P0DN76 240 aaPredicted RBP20.41■□□□□ 0.86
PDE1C-202ENST00000396182 XRCC6P12956 609 aaKnown RBP eCLIP20.41■□□□□ 0.86
PDE1C-202ENST00000396182 U2AF1Q01081 240 aaKnown RBP eCLIP20.41■□□□□ 0.86
PDE1C-202ENST00000396182 AAMPQ13685 434 aa20.41■□□□□ 0.86
PDE1C-202ENST00000396182 PDZRN3Q9UPQ7 1066 aa20.4■□□□□ 0.86
PDE1C-202ENST00000396182 RPGRIP1LQ68CZ1 1315 aa20.39■□□□□ 0.86
PDE1C-202ENST00000396182 GOLGA6L3A6NEY3 463 aa20.39■□□□□ 0.85
PDE1C-202ENST00000396182 CABP2Q9NPB3 220 aa20.39■□□□□ 0.85
PDE1C-202ENST00000396182 FRMPD1Q5SYB0 1578 aa20.38■□□□□ 0.85
PDE1C-202ENST00000396182 EVC2Q86UK5 1308 aa20.38■□□□□ 0.85
PDE1C-202ENST00000396182 MCM4P33991 863 aa20.37■□□□□ 0.85
PDE1C-202ENST00000396182 USP32Q8NFA0 1604 aa20.37■□□□□ 0.85
PDE1C-202ENST00000396182 SAFB2Q14151 953 aaKnown RBP eCLIP20.37■□□□□ 0.85
PDE1C-202ENST00000396182 MYH16Q9H6N6 1097 aa20.37■□□□□ 0.85
PDE1C-202ENST00000396182 ANKRD36BQ8N2N9 1353 aa20.36■□□□□ 0.85
PDE1C-202ENST00000396182 PANK2Q9BZ23 570 aa20.35■□□□□ 0.85
PDE1C-202ENST00000396182 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
PDE1C-202ENST00000396182 TULP4Q9NRJ4 1543 aa20.35■□□□□ 0.85
PDE1C-202ENST00000396182 TSR2Q969E8 191 aaKnown RBP20.35■□□□□ 0.85
PDE1C-202ENST00000396182 RWDD1Q9H446 243 aaPredicted RBP20.35■□□□□ 0.85
PDE1C-202ENST00000396182 PUS7Q96PZ0 661 aaKnown RBP20.34■□□□□ 0.85
PDE1C-202ENST00000396182 GLI2P10070 1586 aa20.34■□□□□ 0.85
PDE1C-202ENST00000396182 MVPQ14764 893 aaKnown RBP20.34■□□□□ 0.85
PDE1C-202ENST00000396182 POGZQ7Z3K3 1410 aa20.34■□□□□ 0.85
PDE1C-202ENST00000396182 SPRYD3Q8NCJ5 442 aa20.33■□□□□ 0.85
PDE1C-202ENST00000396182 VGFO15240 615 aaPredicted RBP20.33■□□□□ 0.84
PDE1C-202ENST00000396182 TPRNQ4KMQ1 711 aa20.33■□□□□ 0.84
PDE1C-202ENST00000396182 GZF1Q9H116 711 aaPredicted RBP20.33■□□□□ 0.84
PDE1C-202ENST00000396182 MLH3Q9UHC1 1453 aa20.32■□□□□ 0.84
PDE1C-202ENST00000396182 ABCC3O15438 1527 aa20.32■□□□□ 0.84
PDE1C-202ENST00000396182 CD109Q6YHK3 1445 aa20.32■□□□□ 0.84
PDE1C-202ENST00000396182 CLCN1P35523 988 aa20.32■□□□□ 0.84
PDE1C-202ENST00000396182 ZKSCAN2Q63HK3 967 aa20.32■□□□□ 0.84
PDE1C-202ENST00000396182 NSD2O96028 1365 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms