RNA–Protein interactions for RNA: ENST00000396133.7

CCNE2-202, Transcript of cyclin E2, humanhuman

TSL 1 (best) BASIC

Gene CCNE2, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2-202ENST00000396133 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
CCNE2-202ENST00000396133 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
CCNE2-202ENST00000396133 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
CCNE2-202ENST00000396133 HDGFP51858 240 aaKnown RBP12.65□□□□□ -0.38
CCNE2-202ENST00000396133 MTMR2Q13614 643 aa12.65□□□□□ -0.38
CCNE2-202ENST00000396133 SLF2Q8IX21 1173 aa12.65□□□□□ -0.38
CCNE2-202ENST00000396133 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
CCNE2-202ENST00000396133 CFHP08603 1231 aa12.64□□□□□ -0.39
CCNE2-202ENST00000396133 PBX2P40425 430 aa12.64□□□□□ -0.39
CCNE2-202ENST00000396133 MYT1LQ9UL68 1186 aa12.64□□□□□ -0.39
CCNE2-202ENST00000396133 POM121CA8CG34 1229 aa12.63□□□□□ -0.39
CCNE2-202ENST00000396133 GLMNQ92990 594 aa12.63□□□□□ -0.39
CCNE2-202ENST00000396133 HMX1Q9NP08 348 aaPredicted RBP12.63□□□□□ -0.39
CCNE2-202ENST00000396133 FUT2Q10981 343 aa12.62□□□□□ -0.39
CCNE2-202ENST00000396133 GRIPAP1Q4V328 841 aa12.62□□□□□ -0.39
CCNE2-202ENST00000396133 CALR3Q96L12 384 aaKnown RBP12.62□□□□□ -0.39
CCNE2-202ENST00000396133 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
CCNE2-202ENST00000396133 SAMD7Q7Z3H4 446 aa12.61□□□□□ -0.39
CCNE2-202ENST00000396133 VPS9D1Q9Y2B5 631 aa12.61□□□□□ -0.39
CCNE2-202ENST00000396133 RNF40O75150 1001 aa12.6□□□□□ -0.39
CCNE2-202ENST00000396133 LAPTM4BQ86VI4 370 aa12.6□□□□□ -0.39
CCNE2-202ENST00000396133 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
CCNE2-202ENST00000396133 CTDSPL2Q05D32 466 aa12.59□□□□□ -0.39
CCNE2-202ENST00000396133 TSC1Q92574 1164 aa12.59□□□□□ -0.39
CCNE2-202ENST00000396133 CFAP99D6REC4 459 aa12.58□□□□□ -0.4
CCNE2-202ENST00000396133 C6orf229H3BNL8 230 aa12.58□□□□□ -0.4
CCNE2-202ENST00000396133 GPR37L1O60883 481 aa12.58□□□□□ -0.4
CCNE2-202ENST00000396133 IRF5Q13568 498 aa12.58□□□□□ -0.4
CCNE2-202ENST00000396133 TRIM34Q9BYJ4 488 aa12.58□□□□□ -0.4
CCNE2-202ENST00000396133 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
CCNE2-202ENST00000396133 LRRN4Q8WUT4 740 aa12.56□□□□□ -0.4
CCNE2-202ENST00000396133 ATP6V1AP38606 617 aa12.55□□□□□ -0.4
CCNE2-202ENST00000396133 LSM11P83369 360 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCNE2-202ENST00000396133 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
CCNE2-202ENST00000396133 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
CCNE2-202ENST00000396133 ZBTB7CA1YPR0 619 aa12.53□□□□□ -0.4
CCNE2-202ENST00000396133 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
CCNE2-202ENST00000396133 RETREG2Q8NC44 543 aa12.52□□□□□ -0.41
CCNE2-202ENST00000396133 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
CCNE2-202ENST00000396133 PRR7Q8TB68 274 aa12.51□□□□□ -0.41
CCNE2-202ENST00000396133 ADAMTS19Q8TE59 1207 aa12.51□□□□□ -0.41
CCNE2-202ENST00000396133 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
CCNE2-202ENST00000396133 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
CCNE2-202ENST00000396133 PPP1R15AO75807 674 aaPredicted RBP12.5□□□□□ -0.41
CCNE2-202ENST00000396133 SYMPKQ92797 1274 aaKnown RBP12.5□□□□□ -0.41
CCNE2-202ENST00000396133 TK2O00142 265 aa12.48□□□□□ -0.41
CCNE2-202ENST00000396133 VAC14Q08AM6 782 aa12.48□□□□□ -0.41
CCNE2-202ENST00000396133 RETREG3Q86VR2 466 aa12.48□□□□□ -0.41
CCNE2-202ENST00000396133 MORN1Q5T089 497 aa12.47□□□□□ -0.41
CCNE2-202ENST00000396133 HDGFL1Q5TGJ6 251 aa12.47□□□□□ -0.41
CCNE2-202ENST00000396133 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
CCNE2-202ENST00000396133 EPS8L1Q8TE68 723 aa12.47□□□□□ -0.41
CCNE2-202ENST00000396133 LRCH3Q96II8 777 aa12.47□□□□□ -0.41
CCNE2-202ENST00000396133 ACTN4O43707 911 aaKnown RBP12.46□□□□□ -0.41
CCNE2-202ENST00000396133 Q3C1V9 767 aa12.45□□□□□ -0.42
CCNE2-202ENST00000396133 PRR14Q9BWN1 585 aa12.44□□□□□ -0.42
CCNE2-202ENST00000396133 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.44□□□□□ -0.42
CCNE2-202ENST00000396133 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
CCNE2-202ENST00000396133 NR6A1Q15406 480 aa12.43□□□□□ -0.42
CCNE2-202ENST00000396133 PUS10Q3MIT2 529 aaKnown RBP12.43□□□□□ -0.42
CCNE2-202ENST00000396133 SLC27A5Q9Y2P5 690 aa12.43□□□□□ -0.42
CCNE2-202ENST00000396133 DESI1Q6ICB0 168 aa12.43□□□□□ -0.42
CCNE2-202ENST00000396133 KCTD17Q8N5Z5 321 aa12.43□□□□□ -0.42
CCNE2-202ENST00000396133 PBXIP1Q96AQ6 731 aa12.43□□□□□ -0.42
CCNE2-202ENST00000396133 ADGRD1Q6QNK2 874 aa12.42□□□□□ -0.42
CCNE2-202ENST00000396133 SOX11P35716 441 aa12.41□□□□□ -0.42
CCNE2-202ENST00000396133 CFAP70Q5T0N1 1121 aa12.41□□□□□ -0.42
CCNE2-202ENST00000396133 ALG2Q9H553 416 aa12.4□□□□□ -0.42
CCNE2-202ENST00000396133 RNF19BQ6ZMZ0 732 aa12.39□□□□□ -0.43
CCNE2-202ENST00000396133 PNMA1Q8ND90 353 aa12.39□□□□□ -0.43
CCNE2-202ENST00000396133 PPP1R12CQ9BZL4 782 aa12.39□□□□□ -0.43
CCNE2-202ENST00000396133 ANKK1Q8NFD2 765 aa12.38□□□□□ -0.43
CCNE2-202ENST00000396133 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.37□□□□□ -0.43
CCNE2-202ENST00000396133 BLOC1S3Q6QNY0 202 aa12.37□□□□□ -0.43
CCNE2-202ENST00000396133 UCN2Q96RP3 112 aa12.37□□□□□ -0.43
CCNE2-202ENST00000396133 LYPD8Q6UX82 237 aa12.36□□□□□ -0.43
CCNE2-202ENST00000396133 ACIN1Q9UKV3 1341 aaKnown RBP12.36□□□□□ -0.43
CCNE2-202ENST00000396133 HRO43593 1189 aa12.35□□□□□ -0.43
CCNE2-202ENST00000396133 RFX1P22670 979 aa12.35□□□□□ -0.43
CCNE2-202ENST00000396133 AEBP1Q8IUX7 1158 aa12.35□□□□□ -0.43
CCNE2-202ENST00000396133 CCDC9Q9Y3X0 531 aaKnown RBP12.35□□□□□ -0.43
CCNE2-202ENST00000396133 PALM3A6NDB9 673 aaPredicted RBP12.34□□□□□ -0.43
CCNE2-202ENST00000396133 PDE4CQ08493 712 aa12.34□□□□□ -0.43
CCNE2-202ENST00000396133 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
CCNE2-202ENST00000396133 HPS5Q9UPZ3 1129 aa12.34□□□□□ -0.43
CCNE2-202ENST00000396133 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.44
CCNE2-202ENST00000396133 SOWAHBA6NEL2 793 aa12.32□□□□□ -0.44
CCNE2-202ENST00000396133 APLP1P51693 650 aa12.32□□□□□ -0.44
CCNE2-202ENST00000396133 SEMA3FQ13275 785 aa12.32□□□□□ -0.44
CCNE2-202ENST00000396133 USTQ9Y2C2 406 aa12.32□□□□□ -0.44
CCNE2-202ENST00000396133 GOLGA8CPA6NN73 597 aa12.31□□□□□ -0.44
CCNE2-202ENST00000396133 BCAMP50895 628 aa12.31□□□□□ -0.44
CCNE2-202ENST00000396133 PPP4CP60510 307 aa12.31□□□□□ -0.44
CCNE2-202ENST00000396133 BRICD5Q6PL45 260 aa12.31□□□□□ -0.44
CCNE2-202ENST00000396133 EIF4G2P78344 907 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCNE2-202ENST00000396133 SRPK2P78362 688 aaKnown RBP12.3□□□□□ -0.44
CCNE2-202ENST00000396133 NR1H3Q13133 447 aa12.3□□□□□ -0.44
CCNE2-202ENST00000396133 PCDHB3Q9Y5E6 796 aa12.3□□□□□ -0.44
CCNE2-202ENST00000396133 NR1I2O75469 434 aa12.3□□□□□ -0.44
CCNE2-202ENST00000396133 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms