RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 SAFB2Q14151 953 aaKnown RBP eCLIP26.64■■□□□ 1.86
LMNB1-202ENST00000395354 CPS1P31327 1500 aa26.64■■□□□ 1.86
LMNB1-202ENST00000395354 CENPJQ9HC77 1338 aaPredicted RBP26.63■■□□□ 1.85
LMNB1-202ENST00000395354 ARHGEF28Q8N1W1 1705 aaKnown RBP26.63■■□□□ 1.85
LMNB1-202ENST00000395354 NKTRP30414 1462 aaKnown RBP26.63■■□□□ 1.85
LMNB1-202ENST00000395354 PLEKHH1Q9ULM0 1364 aa26.63■■□□□ 1.85
LMNB1-202ENST00000395354 RBM33Q96EV2 1170 aaKnown RBP26.62■■□□□ 1.85
LMNB1-202ENST00000395354 YTHDC1Q96MU7 727 aaKnown RBP26.56■■□□□ 1.84
LMNB1-202ENST00000395354 TMEM94Q12767 1356 aa26.56■■□□□ 1.84
LMNB1-202ENST00000395354 MINK1Q8N4C8 1332 aaPredicted RBP26.56■■□□□ 1.84
LMNB1-202ENST00000395354 C14orf37Q86TY3 774 aa26.55■■□□□ 1.84
LMNB1-202ENST00000395354 TESK2Q96S53 571 aa26.55■■□□□ 1.84
LMNB1-202ENST00000395354 LTBP4Q8N2S1 1624 aa26.55■■□□□ 1.84
LMNB1-202ENST00000395354 LRRC7Q96NW7 1537 aa26.54■■□□□ 1.84
LMNB1-202ENST00000395354 QRICH2Q9H0J4 1663 aa26.52■■□□□ 1.84
LMNB1-202ENST00000395354 NCOA3Q9Y6Q9 1424 aa26.51■■□□□ 1.83
LMNB1-202ENST00000395354 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.51■■□□□ 1.83
LMNB1-202ENST00000395354 SLC24A1O60721 1099 aa26.5■■□□□ 1.83
LMNB1-202ENST00000395354 TMF1P82094 1093 aa26.5■■□□□ 1.83
LMNB1-202ENST00000395354 SBNO2Q9Y2G9 1366 aa26.49■■□□□ 1.83
LMNB1-202ENST00000395354 C19orf44Q9H6X5 657 aa26.49■■□□□ 1.83
LMNB1-202ENST00000395354 ADGRL3Q9HAR2 1447 aa26.47■■□□□ 1.83
LMNB1-202ENST00000395354 POLR3GLQ9BT43 218 aa26.46■■□□□ 1.83
LMNB1-202ENST00000395354 PRKRIP1Q9H875 184 aaPredicted RBP26.46■■□□□ 1.83
LMNB1-202ENST00000395354 XIRP1Q702N8 1843 aaKnown RBP26.46■■□□□ 1.83
LMNB1-202ENST00000395354 WASLO00401 505 aaPredicted RBP26.45■■□□□ 1.82
LMNB1-202ENST00000395354 EVC2Q86UK5 1308 aa26.45■■□□□ 1.82
LMNB1-202ENST00000395354 CDK19Q9BWU1 502 aa26.44■■□□□ 1.82
LMNB1-202ENST00000395354 MSH6P52701 1360 aa26.43■■□□□ 1.82
LMNB1-202ENST00000395354 DISP3Q9P2K9 1392 aa26.43■■□□□ 1.82
LMNB1-202ENST00000395354 NALCNQ8IZF0 1738 aa26.43■■□□□ 1.82
LMNB1-202ENST00000395354 CDCA8Q53HL2 280 aa26.42■■□□□ 1.82
LMNB1-202ENST00000395354 ATF3P18847 181 aa26.4■■□□□ 1.82
LMNB1-202ENST00000395354 SRPK2P78362 688 aaKnown RBP26.4■■□□□ 1.82
LMNB1-202ENST00000395354 ADGRB2O60241 1585 aa26.4■■□□□ 1.82
LMNB1-202ENST00000395354 CABP2Q9NPB3 220 aa26.38■■□□□ 1.81
LMNB1-202ENST00000395354 TULP4Q9NRJ4 1543 aa26.38■■□□□ 1.81
LMNB1-202ENST00000395354 CADPS2Q86UW7 1296 aa26.37■■□□□ 1.81
LMNB1-202ENST00000395354 NUTM2FA1L443 756 aa26.37■■□□□ 1.81
LMNB1-202ENST00000395354 CERKQ8TCT0 537 aa26.37■■□□□ 1.81
LMNB1-202ENST00000395354 CDC42BPGQ6DT37 1551 aa26.36■■□□□ 1.81
LMNB1-202ENST00000395354 KTN1Q86UP2 1357 aaKnown RBP26.36■■□□□ 1.81
LMNB1-202ENST00000395354 DCCP43146 1447 aa26.35■■□□□ 1.81
LMNB1-202ENST00000395354 PUS7Q96PZ0 661 aaKnown RBP26.34■■□□□ 1.81
LMNB1-202ENST00000395354 NUDT16Q96DE0 195 aaKnown RBP26.33■■□□□ 1.8
LMNB1-202ENST00000395354 FMN2Q9NZ56 1722 aa26.3■■□□□ 1.8
LMNB1-202ENST00000395354 PRR36Q9H6K5 1346 aa26.3■■□□□ 1.8
LMNB1-202ENST00000395354 SLAIN2Q9P270 581 aa26.29■■□□□ 1.8
LMNB1-202ENST00000395354 CCDC61Q9Y6R9 512 aa26.28■■□□□ 1.8
LMNB1-202ENST00000395354 IQSEC2Q5JU85 1478 aa26.28■■□□□ 1.8
LMNB1-202ENST00000395354 ANKARQ7Z5J8 1434 aa26.27■■□□□ 1.8
LMNB1-202ENST00000395354 ATAD2Q6PL18 1390 aa26.27■■□□□ 1.8
LMNB1-202ENST00000395354 MST1RQ04912 1400 aa26.26■■□□□ 1.79
LMNB1-202ENST00000395354 PER1O15534 1290 aaPredicted RBP26.26■■□□□ 1.79
LMNB1-202ENST00000395354 RALBP1Q15311 655 aa26.26■■□□□ 1.79
LMNB1-202ENST00000395354 ATP7BP35670 1465 aa26.25■■□□□ 1.79
LMNB1-202ENST00000395354 ESCO1Q5FWF5 840 aa26.24■■□□□ 1.79
LMNB1-202ENST00000395354 TMC1Q8TDI8 760 aa26.24■■□□□ 1.79
LMNB1-202ENST00000395354 C1orf167Q5SNV9 1468 aa26.24■■□□□ 1.79
LMNB1-202ENST00000395354 USP32Q8NFA0 1604 aa26.24■■□□□ 1.79
LMNB1-202ENST00000395354 RGPD8O14715 1765 aaPredicted RBP26.24■■□□□ 1.79
LMNB1-202ENST00000395354 TOM1O60784 492 aa26.24■■□□□ 1.79
LMNB1-202ENST00000395354 CABP1Q9NZU7 370 aa26.24■■□□□ 1.79
LMNB1-202ENST00000395354 ORAI2Q96SN7 254 aa26.23■■□□□ 1.79
LMNB1-202ENST00000395354 SLC12A5Q9H2X9 1139 aa26.22■■□□□ 1.79
LMNB1-202ENST00000395354 PANK3Q9H999 370 aa26.22■■□□□ 1.79
LMNB1-202ENST00000395354 UBAP1LF5GYI3 381 aa26.21■■□□□ 1.79
LMNB1-202ENST00000395354 MRS2Q9HD23 443 aa26.2■■□□□ 1.79
LMNB1-202ENST00000395354 PPIP5K1Q6PFW1 1433 aa26.2■■□□□ 1.78
LMNB1-202ENST00000395354 PMFBP1Q8TBY8 1022 aa26.2■■□□□ 1.78
LMNB1-202ENST00000395354 PLEKHG3A1L390 1219 aa26.19■■□□□ 1.78
LMNB1-202ENST00000395354 PHF8Q9UPP1 1060 aa26.19■■□□□ 1.78
LMNB1-202ENST00000395354 MYOM1P52179 1685 aa26.18■■□□□ 1.78
LMNB1-202ENST00000395354 PARD3Q8TEW0 1356 aa26.18■■□□□ 1.78
LMNB1-202ENST00000395354 NINLQ9Y2I6 1382 aa26.17■■□□□ 1.78
LMNB1-202ENST00000395354 MYBBP1AQ9BQG0 1328 aaKnown RBP26.17■■□□□ 1.78
LMNB1-202ENST00000395354 CCDC184Q52MB2 194 aa26.16■■□□□ 1.78
LMNB1-202ENST00000395354 ITSN1Q15811 1721 aa26.15■■□□□ 1.78
LMNB1-202ENST00000395354 BRINP3Q76B58 766 aa26.15■■□□□ 1.78
LMNB1-202ENST00000395354 NGDNQ8NEJ9 315 aaKnown RBP26.15■■□□□ 1.78
LMNB1-202ENST00000395354 TOPAZ1Q8N9V7 1692 aa26.15■■□□□ 1.78
LMNB1-202ENST00000395354 ACEP12821 1306 aa26.13■■□□□ 1.77
LMNB1-202ENST00000395354 PIP4K2BP78356 416 aa26.13■■□□□ 1.77
LMNB1-202ENST00000395354 BRD4O60885 1362 aaPredicted RBP26.13■■□□□ 1.77
LMNB1-202ENST00000395354 TERF2IPQ9NYB0 399 aa26.12■■□□□ 1.77
LMNB1-202ENST00000395354 FOXO3O43524 673 aa26.12■■□□□ 1.77
LMNB1-202ENST00000395354 NPC1L1Q9UHC9 1359 aa26.11■■□□□ 1.77
LMNB1-202ENST00000395354 HDGFL2Q7Z4V5 671 aaPredicted RBP26.11■■□□□ 1.77
LMNB1-202ENST00000395354 ZNF692Q9BU19 519 aaPredicted RBP26.1■■□□□ 1.77
LMNB1-202ENST00000395354 KNSTRNQ9Y448 316 aa26.1■■□□□ 1.77
LMNB1-202ENST00000395354 SCAF1Q9H7N4 1312 aaKnown RBP26.1■■□□□ 1.77
LMNB1-202ENST00000395354 POLR3AO14802 1390 aaPredicted RBP26.09■■□□□ 1.77
LMNB1-202ENST00000395354 PSME1Q06323 249 aa26.08■■□□□ 1.77
LMNB1-202ENST00000395354 CD163L1Q9NR16 1453 aa26.07■■□□□ 1.76
LMNB1-202ENST00000395354 KIF1AQ12756 1690 aa26.07■■□□□ 1.76
LMNB1-202ENST00000395354 ANKRD36BQ8N2N9 1353 aa26.07■■□□□ 1.76
LMNB1-202ENST00000395354 CPSF1Q10570 1443 aaKnown RBP26.07■■□□□ 1.76
LMNB1-202ENST00000395354 DDX17Q92841 729 aaKnown RBP26.07■■□□□ 1.76
LMNB1-202ENST00000395354 A0A1W2PP64 1363 aa26.06■■□□□ 1.76
LMNB1-202ENST00000395354 NLRP13Q86W25 1043 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms