RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ADGRB1O14514 1584 aa9.49□□□□□ -0.89
SMARCAD1-203ENST00000394961 POTEAQ6S8J7 498 aa9.49□□□□□ -0.89
SMARCAD1-203ENST00000394961 ATRNO75882 1429 aa9.49□□□□□ -0.89
SMARCAD1-203ENST00000394961 ARHGEF28Q8N1W1 1705 aaKnown RBP9.48□□□□□ -0.89
SMARCAD1-203ENST00000394961 RGPD8O14715 1765 aaPredicted RBP9.48□□□□□ -0.89
SMARCAD1-203ENST00000394961 ROBO2Q9HCK4 1378 aa9.48□□□□□ -0.89
SMARCAD1-203ENST00000394961 ANKARQ7Z5J8 1434 aa9.48□□□□□ -0.89
SMARCAD1-203ENST00000394961 HRCP23327 699 aa9.47□□□□□ -0.89
SMARCAD1-203ENST00000394961 LRRC59Q96AG4 307 aaKnown RBP9.46□□□□□ -0.89
SMARCAD1-203ENST00000394961 STAC3Q96MF2 364 aa9.46□□□□□ -0.89
SMARCAD1-203ENST00000394961 CCDC144AA2RUR9 1427 aa9.46□□□□□ -0.89
SMARCAD1-203ENST00000394961 COL14A1Q05707 1796 aaKnown RBP9.45□□□□□ -0.9
SMARCAD1-203ENST00000394961 RGS12O14924 1447 aa9.44□□□□□ -0.9
SMARCAD1-203ENST00000394961 SLIT2O94813 1529 aa9.44□□□□□ -0.9
SMARCAD1-203ENST00000394961 LRP5O75197 1615 aa9.44□□□□□ -0.9
SMARCAD1-203ENST00000394961 YTHDC2Q9H6S0 1430 aaKnown RBP9.43□□□□□ -0.9
SMARCAD1-203ENST00000394961 USP54Q70EL1 1684 aa9.43□□□□□ -0.9
SMARCAD1-203ENST00000394961 SBNO1A3KN83 1393 aa9.43□□□□□ -0.9
SMARCAD1-203ENST00000394961 BRWD3Q6RI45 1802 aa9.43□□□□□ -0.9
SMARCAD1-203ENST00000394961 RGPD1P0DJD0 1748 aa9.42□□□□□ -0.9
SMARCAD1-203ENST00000394961 PHRF1Q9P1Y6 1649 aaKnown RBP9.42□□□□□ -0.9
SMARCAD1-203ENST00000394961 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
SMARCAD1-203ENST00000394961 GLI3P10071 1580 aa9.42□□□□□ -0.9
SMARCAD1-203ENST00000394961 TULP4Q9NRJ4 1543 aa9.42□□□□□ -0.9
SMARCAD1-203ENST00000394961 RGPD3A6NKT7 1758 aaPredicted RBP9.42□□□□□ -0.9
SMARCAD1-203ENST00000394961 RGPD4Q7Z3J3 1758 aa9.42□□□□□ -0.9
SMARCAD1-203ENST00000394961 EIF3AQ14152 1382 aaKnown RBP9.42□□□□□ -0.9
SMARCAD1-203ENST00000394961 THSD7AQ9UPZ6 1657 aa9.42□□□□□ -0.9
SMARCAD1-203ENST00000394961 BCANQ96GW7 911 aa9.41□□□□□ -0.9
SMARCAD1-203ENST00000394961 WNK3Q9BYP7 1800 aa9.4□□□□□ -0.9
SMARCAD1-203ENST00000394961 CHGAP10645 457 aaKnown RBP9.4□□□□□ -0.91
SMARCAD1-203ENST00000394961 NPHP3Q7Z494 1330 aa9.4□□□□□ -0.91
SMARCAD1-203ENST00000394961 BCL9LQ86UU0 1499 aa9.39□□□□□ -0.91
SMARCAD1-203ENST00000394961 C14orf93Q9H972 538 aaKnown RBP9.39□□□□□ -0.91
SMARCAD1-203ENST00000394961 TNS3Q68CZ2 1445 aa9.39□□□□□ -0.91
SMARCAD1-203ENST00000394961 RBM6P78332 1123 aaKnown RBP9.39□□□□□ -0.91
SMARCAD1-203ENST00000394961 ZNF326Q5BKZ1 582 aaKnown RBP9.39□□□□□ -0.91
SMARCAD1-203ENST00000394961 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCAD1-203ENST00000394961 TNS1Q9HBL0 1735 aaKnown RBP9.38□□□□□ -0.91
SMARCAD1-203ENST00000394961 ATP7BP35670 1465 aa9.38□□□□□ -0.91
SMARCAD1-203ENST00000394961 AFF2P51816 1311 aa9.38□□□□□ -0.91
SMARCAD1-203ENST00000394961 RXRBP28702 533 aa9.38□□□□□ -0.91
SMARCAD1-203ENST00000394961 ATAD2Q6PL18 1390 aa9.38□□□□□ -0.91
SMARCAD1-203ENST00000394961 SLC4A1APQ9BWU0 796 aaKnown RBP9.38□□□□□ -0.91
SMARCAD1-203ENST00000394961 MPHOSPH9Q99550 1183 aa9.37□□□□□ -0.91
SMARCAD1-203ENST00000394961 C14orf37Q86TY3 774 aa9.36□□□□□ -0.91
SMARCAD1-203ENST00000394961 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
SMARCAD1-203ENST00000394961 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
SMARCAD1-203ENST00000394961 LMO7Q8WWI1 1683 aa9.36□□□□□ -0.91
SMARCAD1-203ENST00000394961 RREB1Q92766 1687 aa9.36□□□□□ -0.91
SMARCAD1-203ENST00000394961 ABCC6O95255 1503 aa9.36□□□□□ -0.91
SMARCAD1-203ENST00000394961 BRD4O60885 1362 aaPredicted RBP9.36□□□□□ -0.91
SMARCAD1-203ENST00000394961 DHX57Q6P158 1386 aaKnown RBP9.36□□□□□ -0.91
SMARCAD1-203ENST00000394961 ADGRF5Q8IZF2 1346 aa9.36□□□□□ -0.91
SMARCAD1-203ENST00000394961 ARHGEF10O15013 1369 aa9.35□□□□□ -0.91
SMARCAD1-203ENST00000394961 SPATA31A3Q5VYP0 1347 aa9.35□□□□□ -0.91
SMARCAD1-203ENST00000394961 AKAP12Q02952 1782 aa9.35□□□□□ -0.91
SMARCAD1-203ENST00000394961 MEX3CQ5U5Q3 659 aaKnown RBP9.35□□□□□ -0.91
SMARCAD1-203ENST00000394961 PARP4Q9UKK3 1724 aaKnown RBP9.34□□□□□ -0.91
SMARCAD1-203ENST00000394961 QRICH2Q9H0J4 1663 aa9.34□□□□□ -0.91
SMARCAD1-203ENST00000394961 TRPC5Q9UL62 973 aaPredicted RBP9.34□□□□□ -0.91
SMARCAD1-203ENST00000394961 NUTM2DQ5VT03 806 aaPredicted RBP9.34□□□□□ -0.92
SMARCAD1-203ENST00000394961 NGLY1Q96IV0 654 aa9.34□□□□□ -0.92
SMARCAD1-203ENST00000394961 DISP2A7MBM2 1401 aa9.33□□□□□ -0.92
SMARCAD1-203ENST00000394961 NRKQ7Z2Y5 1582 aa9.33□□□□□ -0.92
SMARCAD1-203ENST00000394961 ONECUT3O60422 494 aaPredicted RBP9.33□□□□□ -0.92
SMARCAD1-203ENST00000394961 TRPM1Q7Z4N2 1603 aa9.33□□□□□ -0.92
SMARCAD1-203ENST00000394961 RALGAPBQ86X10 1494 aa9.32□□□□□ -0.92
SMARCAD1-203ENST00000394961 PLEKHH1Q9ULM0 1364 aa9.31□□□□□ -0.92
SMARCAD1-203ENST00000394961 FOXD1Q16676 465 aa9.31□□□□□ -0.92
SMARCAD1-203ENST00000394961 RAB3GAP2Q9H2M9 1393 aa9.31□□□□□ -0.92
SMARCAD1-203ENST00000394961 PEAK1Q9H792 1746 aa9.3□□□□□ -0.92
SMARCAD1-203ENST00000394961 POLR3AO14802 1390 aaPredicted RBP9.3□□□□□ -0.92
SMARCAD1-203ENST00000394961 ORAI2Q96SN7 254 aa9.3□□□□□ -0.92
SMARCAD1-203ENST00000394961 QTRT2Q9H974 415 aaKnown RBP9.3□□□□□ -0.92
SMARCAD1-203ENST00000394961 SLIT3O75094 1523 aa9.3□□□□□ -0.92
SMARCAD1-203ENST00000394961 BLMP54132 1417 aaPredicted RBP9.3□□□□□ -0.92
SMARCAD1-203ENST00000394961 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
SMARCAD1-203ENST00000394961 COL18A1P39060 1754 aa9.29□□□□□ -0.92
SMARCAD1-203ENST00000394961 MON2Q7Z3U7 1717 aa9.29□□□□□ -0.92
SMARCAD1-203ENST00000394961 PSME1Q06323 249 aa9.29□□□□□ -0.92
SMARCAD1-203ENST00000394961 ITGAEP38570 1179 aa9.28□□□□□ -0.92
SMARCAD1-203ENST00000394961 VPS72Q15906 364 aa9.28□□□□□ -0.92
SMARCAD1-203ENST00000394961 USP21Q9UK80 565 aa9.27□□□□□ -0.92
SMARCAD1-203ENST00000394961 NUP188Q5SRE5 1749 aa9.27□□□□□ -0.93
SMARCAD1-203ENST00000394961 SBF2Q86WG5 1849 aa9.27□□□□□ -0.93
SMARCAD1-203ENST00000394961 UNC5CLQ8IV45 518 aa9.26□□□□□ -0.93
SMARCAD1-203ENST00000394961 GJD4Q96KN9 370 aaPredicted RBP9.25□□□□□ -0.93
SMARCAD1-203ENST00000394961 FAM208AQ9UK61 1670 aaKnown RBP9.25□□□□□ -0.93
SMARCAD1-203ENST00000394961 COL24A1Q17RW2 1714 aa9.25□□□□□ -0.93
SMARCAD1-203ENST00000394961 QSER1Q2KHR3 1735 aa9.25□□□□□ -0.93
SMARCAD1-203ENST00000394961 C8orf37Q96NL8 207 aa9.25□□□□□ -0.93
SMARCAD1-203ENST00000394961 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
SMARCAD1-203ENST00000394961 CPDO75976 1380 aa9.25□□□□□ -0.93
SMARCAD1-203ENST00000394961 ESCO1Q5FWF5 840 aa9.24□□□□□ -0.93
SMARCAD1-203ENST00000394961 KRT28Q7Z3Y7 464 aa9.24□□□□□ -0.93
SMARCAD1-203ENST00000394961 PIK3C2AO00443 1686 aa9.24□□□□□ -0.93
SMARCAD1-203ENST00000394961 PARD3Q8TEW0 1356 aa9.23□□□□□ -0.93
SMARCAD1-203ENST00000394961 BCL9O00512 1426 aa9.23□□□□□ -0.93
SMARCAD1-203ENST00000394961 NUTM2BA6NNL0 878 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms