RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 NPHP3Q7Z494 1330 aa29.85■■■□□ 2.37
UPK3B-203ENST00000394849 ATRNO75882 1429 aa29.85■■■□□ 2.37
UPK3B-203ENST00000394849 ZRANB1Q9UGI0 708 aa29.81■■■□□ 2.36
UPK3B-203ENST00000394849 NAIPQ13075 1403 aa29.8■■■□□ 2.36
UPK3B-203ENST00000394849 MYOM2P54296 1465 aa29.8■■■□□ 2.36
UPK3B-203ENST00000394849 CDC42BPGQ6DT37 1551 aa29.79■■■□□ 2.36
UPK3B-203ENST00000394849 LRPPRCP42704 1394 aaKnown RBP29.78■■■□□ 2.36
UPK3B-203ENST00000394849 ESCO1Q5FWF5 840 aa29.78■■■□□ 2.36
UPK3B-203ENST00000394849 EP400Q96L91 3159 aa29.78■■■□□ 2.36
UPK3B-203ENST00000394849 PPLO60437 1756 aa29.77■■■□□ 2.36
UPK3B-203ENST00000394849 MARF1Q9Y4F3 1742 aaKnown RBP29.76■■■□□ 2.35
UPK3B-203ENST00000394849 BCL9LQ86UU0 1499 aa29.74■■■□□ 2.35
UPK3B-203ENST00000394849 PXDNQ92626 1479 aa29.74■■■□□ 2.35
UPK3B-203ENST00000394849 RRBP1Q9P2E9 1410 aaKnown RBP29.73■■■□□ 2.35
UPK3B-203ENST00000394849 SLC4A1APQ9BWU0 796 aaKnown RBP29.72■■■□□ 2.35
UPK3B-203ENST00000394849 PPARGC1BQ86YN6 1023 aaKnown RBP29.71■■■□□ 2.35
UPK3B-203ENST00000394849 GJD4Q96KN9 370 aaPredicted RBP29.71■■■□□ 2.35
UPK3B-203ENST00000394849 FOXO3O43524 673 aa29.7■■■□□ 2.35
UPK3B-203ENST00000394849 TECPR2O15040 1411 aa29.67■■■□□ 2.34
UPK3B-203ENST00000394849 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.67■■■□□ 2.34
UPK3B-203ENST00000394849 XPCQ01831 940 aaPredicted RBP29.62■■■□□ 2.33
UPK3B-203ENST00000394849 UNC5CLQ8IV45 518 aa29.62■■■□□ 2.33
UPK3B-203ENST00000394849 ABCC11Q96J66 1382 aa29.62■■■□□ 2.33
UPK3B-203ENST00000394849 ANKRD30BQ9BXX2 1392 aa29.62■■■□□ 2.33
UPK3B-203ENST00000394849 KIF1AQ12756 1690 aa29.6■■■□□ 2.33
UPK3B-203ENST00000394849 SPATA31A3Q5VYP0 1347 aa29.59■■■□□ 2.33
UPK3B-203ENST00000394849 CCDC144AA2RUR9 1427 aa29.59■■■□□ 2.33
UPK3B-203ENST00000394849 BLMP54132 1417 aaPredicted RBP29.59■■■□□ 2.33
UPK3B-203ENST00000394849 SLIT2O94813 1529 aa29.59■■■□□ 2.33
UPK3B-203ENST00000394849 ADGRF5Q8IZF2 1346 aa29.58■■■□□ 2.33
UPK3B-203ENST00000394849 STK26Q9P289 416 aa29.58■■■□□ 2.33
UPK3B-203ENST00000394849 KNDC1Q76NI1 1749 aa29.57■■■□□ 2.32
UPK3B-203ENST00000394849 WAPLQ7Z5K2 1190 aa29.57■■■□□ 2.32
UPK3B-203ENST00000394849 RALGAPBQ86X10 1494 aa29.56■■■□□ 2.32
UPK3B-203ENST00000394849 NUTM2FA1L443 756 aa29.55■■■□□ 2.32
UPK3B-203ENST00000394849 FMN2Q9NZ56 1722 aa29.54■■■□□ 2.32
UPK3B-203ENST00000394849 GLI3P10071 1580 aa29.53■■■□□ 2.32
UPK3B-203ENST00000394849 SIRT1Q96EB6 747 aa29.53■■■□□ 2.32
UPK3B-203ENST00000394849 USP32Q8NFA0 1604 aa29.53■■■□□ 2.32
UPK3B-203ENST00000394849 SPATA31E1Q6ZUB1 1445 aa29.52■■■□□ 2.32
UPK3B-203ENST00000394849 IFT172Q9UG01 1749 aa29.51■■■□□ 2.32
UPK3B-203ENST00000394849 PSME1Q06323 249 aa29.51■■■□□ 2.31
UPK3B-203ENST00000394849 SF3B2Q13435 895 aaKnown RBP29.51■■■□□ 2.31
UPK3B-203ENST00000394849 RGL3Q3MIN7 710 aa29.51■■■□□ 2.31
UPK3B-203ENST00000394849 KRT28Q7Z3Y7 464 aa29.51■■■□□ 2.31
UPK3B-203ENST00000394849 PIK3C2GO75747 1445 aa29.49■■■□□ 2.31
UPK3B-203ENST00000394849 HAP1P54257 671 aaPredicted RBP29.49■■■□□ 2.31
UPK3B-203ENST00000394849 YTHDC2Q9H6S0 1430 aaKnown RBP29.48■■■□□ 2.31
UPK3B-203ENST00000394849 PLEKHH1Q9ULM0 1364 aa29.48■■■□□ 2.31
UPK3B-203ENST00000394849 VPS72Q15906 364 aa29.47■■■□□ 2.31
UPK3B-203ENST00000394849 TMEM132EQ6IEE7 984 aa29.47■■■□□ 2.31
UPK3B-203ENST00000394849 TNS3Q68CZ2 1445 aa29.46■■■□□ 2.31
UPK3B-203ENST00000394849 BRWD3Q6RI45 1802 aa29.46■■■□□ 2.31
UPK3B-203ENST00000394849 NWD2Q9ULI1 1742 aa29.45■■■□□ 2.31
UPK3B-203ENST00000394849 ONECUT3O60422 494 aaPredicted RBP29.45■■■□□ 2.31
UPK3B-203ENST00000394849 SEPT12Q8IYM1 358 aa29.45■■■□□ 2.31
UPK3B-203ENST00000394849 PHF8Q9UPP1 1060 aa29.45■■■□□ 2.31
UPK3B-203ENST00000394849 SBNO1A3KN83 1393 aa29.43■■■□□ 2.3
UPK3B-203ENST00000394849 ARHGEF10O15013 1369 aa29.42■■■□□ 2.3
UPK3B-203ENST00000394849 DEFB132Q7Z7B7 95 aa29.39■■■□□ 2.3
UPK3B-203ENST00000394849 MPHOSPH9Q99550 1183 aa29.39■■■□□ 2.3
UPK3B-203ENST00000394849 C14orf93Q9H972 538 aaKnown RBP29.39■■■□□ 2.3
UPK3B-203ENST00000394849 RGPD8O14715 1765 aaPredicted RBP29.39■■■□□ 2.29
UPK3B-203ENST00000394849 DHX57Q6P158 1386 aaKnown RBP29.39■■■□□ 2.29
UPK3B-203ENST00000394849 PLCH1Q4KWH8 1693 aa29.38■■■□□ 2.29
UPK3B-203ENST00000394849 KRT27Q7Z3Y8 459 aa29.38■■■□□ 2.29
UPK3B-203ENST00000394849 CCDC9Q9Y3X0 531 aaKnown RBP29.38■■■□□ 2.29
UPK3B-203ENST00000394849 ACIN1Q9UKV3 1341 aaKnown RBP29.38■■■□□ 2.29
UPK3B-203ENST00000394849 NRXN1Q9ULB1 1477 aa29.37■■■□□ 2.29
UPK3B-203ENST00000394849 CABLES1Q8TDN4 633 aa29.35■■■□□ 2.29
UPK3B-203ENST00000394849 LRP5O75197 1615 aa29.34■■■□□ 2.29
UPK3B-203ENST00000394849 LMOD2Q6P5Q4 547 aa29.33■■■□□ 2.29
UPK3B-203ENST00000394849 ABCA3Q99758 1704 aa29.33■■■□□ 2.29
UPK3B-203ENST00000394849 ANKARQ7Z5J8 1434 aa29.31■■■□□ 2.28
UPK3B-203ENST00000394849 BAG6P46379 1132 aa29.31■■■□□ 2.28
UPK3B-203ENST00000394849 FAM83GA6ND36 823 aa29.29■■■□□ 2.28
UPK3B-203ENST00000394849 PRAM1Q96QH2 718 aa29.28■■■□□ 2.28
UPK3B-203ENST00000394849 DLC1Q96QB1 1528 aa29.26■■■□□ 2.27
UPK3B-203ENST00000394849 A0A0G2JS52 829 aa29.26■■■□□ 2.27
UPK3B-203ENST00000394849 MYT1Q01538 1121 aa29.26■■■□□ 2.27
UPK3B-203ENST00000394849 CFAP70Q5T0N1 1121 aa29.26■■■□□ 2.27
UPK3B-203ENST00000394849 POGKQ9P215 609 aa29.26■■■□□ 2.27
UPK3B-203ENST00000394849 PLEKHG5O94827 1062 aa29.24■■■□□ 2.27
UPK3B-203ENST00000394849 EIF3AQ14152 1382 aaKnown RBP29.24■■■□□ 2.27
UPK3B-203ENST00000394849 GPRASP1Q5JY77 1395 aa29.23■■■□□ 2.27
UPK3B-203ENST00000394849 NRAPQ86VF7 1730 aa29.23■■■□□ 2.27
UPK3B-203ENST00000394849 ADGRB2O60241 1585 aa29.22■■■□□ 2.27
UPK3B-203ENST00000394849 SAFB2Q14151 953 aaKnown RBP eCLIP29.22■■■□□ 2.27
UPK3B-203ENST00000394849 PMFBP1Q8TBY8 1022 aa29.22■■■□□ 2.27
UPK3B-203ENST00000394849 BTG4Q9NY30 223 aa29.22■■■□□ 2.27
UPK3B-203ENST00000394849 COL14A1Q05707 1796 aaKnown RBP29.21■■■□□ 2.27
UPK3B-203ENST00000394849 FAM98CQ17RN3 349 aaKnown RBP29.21■■■□□ 2.27
UPK3B-203ENST00000394849 TRPM3Q9HCF6 1732 aaPredicted RBP29.19■■■□□ 2.26
UPK3B-203ENST00000394849 RGPD1P0DJD0 1748 aa29.18■■■□□ 2.26
UPK3B-203ENST00000394849 HRCP23327 699 aa29.18■■■□□ 2.26
UPK3B-203ENST00000394849 ALS2Q96Q42 1657 aa29.17■■■□□ 2.26
UPK3B-203ENST00000394849 PSDA5PKW4 1024 aaPredicted RBP29.14■■■□□ 2.26
UPK3B-203ENST00000394849 SPATA31A5Q5VU36 1347 aa29.14■■■□□ 2.25
UPK3B-203ENST00000394849 SPATA31A7Q8IWB4 1347 aa29.14■■■□□ 2.25
UPK3B-203ENST00000394849 DISP2A7MBM2 1401 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms