RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ESF1Q9H501 851 aaKnown RBP24■■□□□ 1.43
PCDHA1-202ENST00000394633 CENPQQ7L2Z9 268 aaPredicted RBP23.99■■□□□ 1.43
PCDHA1-202ENST00000394633 SLC52A1Q9NWF4 448 aa23.99■■□□□ 1.43
PCDHA1-202ENST00000394633 TMEM131LA2VDJ0 1609 aa23.99■■□□□ 1.43
PCDHA1-202ENST00000394633 SLFN5Q08AF3 891 aa23.99■■□□□ 1.43
PCDHA1-202ENST00000394633 EIF3AQ14152 1382 aaKnown RBP23.98■■□□□ 1.43
PCDHA1-202ENST00000394633 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
PCDHA1-202ENST00000394633 NEXMIFQ5QGS0 1516 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 NRXN1Q9ULB1 1477 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 NEFMP07197 916 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 CCDC146Q8IYE0 955 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 TRMT2AQ8IZ69 625 aaKnown RBP23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 DDRGK1Q96HY6 314 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.95■■□□□ 1.42
PCDHA1-202ENST00000394633 USP35Q9P2H5 1018 aa23.94■■□□□ 1.42
PCDHA1-202ENST00000394633 FER1L4A9Z1Z3 1794 aa23.93■■□□□ 1.42
PCDHA1-202ENST00000394633 CFAP70Q5T0N1 1121 aa23.93■■□□□ 1.42
PCDHA1-202ENST00000394633 PPM1GO15355 546 aaPredicted RBP23.92■■□□□ 1.42
PCDHA1-202ENST00000394633 SPINK5Q9NQ38 1064 aaPredicted RBP23.92■■□□□ 1.42
PCDHA1-202ENST00000394633 CEBPAP49715 358 aaPredicted RBP23.91■■□□□ 1.42
PCDHA1-202ENST00000394633 NKTRP30414 1462 aaKnown RBP23.9■■□□□ 1.42
PCDHA1-202ENST00000394633 APAF1O14727 1248 aa23.9■■□□□ 1.42
PCDHA1-202ENST00000394633 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
PCDHA1-202ENST00000394633 RPGRIP1LQ68CZ1 1315 aa23.88■■□□□ 1.41
PCDHA1-202ENST00000394633 C3P01024 1663 aa23.88■■□□□ 1.41
PCDHA1-202ENST00000394633 C8orf34Q49A92 452 aa23.88■■□□□ 1.41
PCDHA1-202ENST00000394633 FAM161AQ3B820 660 aa23.87■■□□□ 1.41
PCDHA1-202ENST00000394633 MYO3AQ8NEV4 1616 aa23.87■■□□□ 1.41
PCDHA1-202ENST00000394633 A2ML1A8K2U0 1454 aa23.86■■□□□ 1.41
PCDHA1-202ENST00000394633 PLPPR3Q6T4P5 718 aa23.86■■□□□ 1.41
PCDHA1-202ENST00000394633 CARD14Q9BXL6 1004 aa23.86■■□□□ 1.41
PCDHA1-202ENST00000394633 TNRQ92752 1358 aa23.85■■□□□ 1.41
PCDHA1-202ENST00000394633 STAG3Q9UJ98 1225 aa23.84■■□□□ 1.41
PCDHA1-202ENST00000394633 BCAR3O75815 825 aa23.83■■□□□ 1.41
PCDHA1-202ENST00000394633 VIRMAQ69YN4 1812 aaKnown RBP23.83■■□□□ 1.41
PCDHA1-202ENST00000394633 E9PSI1 815 aa23.83■■□□□ 1.4
PCDHA1-202ENST00000394633 DMRT2Q9Y5R5 561 aa23.83■■□□□ 1.4
PCDHA1-202ENST00000394633 SLC24A1O60721 1099 aa23.82■■□□□ 1.4
PCDHA1-202ENST00000394633 VGFO15240 615 aaPredicted RBP23.81■■□□□ 1.4
PCDHA1-202ENST00000394633 SLC4A3P48751 1232 aa23.8■■□□□ 1.4
PCDHA1-202ENST00000394633 ADGRB1O14514 1584 aa23.8■■□□□ 1.4
PCDHA1-202ENST00000394633 SHPRHQ149N8 1683 aa23.8■■□□□ 1.4
PCDHA1-202ENST00000394633 C14orf93Q9H972 538 aaKnown RBP23.8■■□□□ 1.4
PCDHA1-202ENST00000394633 RGS3P49796 1198 aa23.79■■□□□ 1.4
PCDHA1-202ENST00000394633 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
PCDHA1-202ENST00000394633 ZFYVE9O95405 1425 aa23.78■■□□□ 1.4
PCDHA1-202ENST00000394633 SETBP1Q9Y6X0 1596 aa23.78■■□□□ 1.4
PCDHA1-202ENST00000394633 NGEFQ8N5V2 710 aa23.78■■□□□ 1.4
PCDHA1-202ENST00000394633 RIMS1Q86UR5 1692 aaKnown RBP23.77■■□□□ 1.4
PCDHA1-202ENST00000394633 POLR3AO14802 1390 aaPredicted RBP23.77■■□□□ 1.4
PCDHA1-202ENST00000394633 SBNO2Q9Y2G9 1366 aa23.77■■□□□ 1.4
PCDHA1-202ENST00000394633 UBR1Q8IWV7 1749 aa23.77■■□□□ 1.39
PCDHA1-202ENST00000394633 RIMS2Q9UQ26 1411 aa23.75■■□□□ 1.39
PCDHA1-202ENST00000394633 NFKBIBQ15653 356 aa23.74■■□□□ 1.39
PCDHA1-202ENST00000394633 ADAMTSL3P82987 1691 aa23.73■■□□□ 1.39
PCDHA1-202ENST00000394633 QRICH2Q9H0J4 1663 aa23.73■■□□□ 1.39
PCDHA1-202ENST00000394633 IGHDP01880 384 aa23.72■■□□□ 1.39
PCDHA1-202ENST00000394633 DAXXQ9UER7 740 aaPredicted RBP23.72■■□□□ 1.39
PCDHA1-202ENST00000394633 WWC1Q8IX03 1113 aa23.72■■□□□ 1.39
PCDHA1-202ENST00000394633 PDE3AQ14432 1141 aa23.71■■□□□ 1.39
PCDHA1-202ENST00000394633 CGNL1Q0VF96 1302 aa23.71■■□□□ 1.39
PCDHA1-202ENST00000394633 CENPJQ9HC77 1338 aaPredicted RBP23.71■■□□□ 1.39
PCDHA1-202ENST00000394633 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
PCDHA1-202ENST00000394633 NINLQ9Y2I6 1382 aa23.7■■□□□ 1.38
PCDHA1-202ENST00000394633 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
PCDHA1-202ENST00000394633 NLRP1Q9C000 1473 aa23.7■■□□□ 1.38
PCDHA1-202ENST00000394633 IL27Q8NEV9 243 aa23.68■■□□□ 1.38
PCDHA1-202ENST00000394633 IQSEC2Q5JU85 1478 aa23.67■■□□□ 1.38
PCDHA1-202ENST00000394633 ALKQ9UM73 1620 aa23.67■■□□□ 1.38
PCDHA1-202ENST00000394633 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 PANK1Q8TE04 598 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 USP32Q8NFA0 1604 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 PTPRMP28827 1452 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 TMEM2Q9UHN6 1383 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 CLUAP1Q96AJ1 413 aa23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 MORC1Q86VD1 984 aa23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 COG6Q9Y2V7 657 aa23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 SETD1AO15047 1707 aaKnown RBP23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 ARHGEF28Q8N1W1 1705 aaKnown RBP23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
PCDHA1-202ENST00000394633 GSE1Q14687 1217 aa23.63■■□□□ 1.37
PCDHA1-202ENST00000394633 RUNDC1Q96C34 613 aa23.63■■□□□ 1.37
PCDHA1-202ENST00000394633 SLC12A5Q9H2X9 1139 aa23.63■■□□□ 1.37
PCDHA1-202ENST00000394633 USP19O94966 1318 aa23.62■■□□□ 1.37
PCDHA1-202ENST00000394633 TNNT2P45379 298 aaPredicted RBP23.62■■□□□ 1.37
PCDHA1-202ENST00000394633 RRP7AQ9Y3A4 280 aaKnown RBP23.61■■□□□ 1.37
PCDHA1-202ENST00000394633 NEUROD2Q15784 382 aa23.61■■□□□ 1.37
PCDHA1-202ENST00000394633 STK26Q9P289 416 aa23.61■■□□□ 1.37
PCDHA1-202ENST00000394633 LTKP29376 864 aa23.6■■□□□ 1.37
PCDHA1-202ENST00000394633 PHF23Q9BUL5 403 aaPredicted RBP23.6■■□□□ 1.37
PCDHA1-202ENST00000394633 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
PCDHA1-202ENST00000394633 RARSP54136 660 aaKnown RBP23.59■■□□□ 1.37
PCDHA1-202ENST00000394633 TCP11L2Q8N4U5 519 aa23.59■■□□□ 1.37
PCDHA1-202ENST00000394633 FRAT1Q92837 279 aaPredicted RBP23.59■■□□□ 1.37
PCDHA1-202ENST00000394633 YTHDC2Q9H6S0 1430 aaKnown RBP23.58■■□□□ 1.37
PCDHA1-202ENST00000394633 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
PCDHA1-202ENST00000394633 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
PCDHA1-202ENST00000394633 SEC24BO95487 1268 aa23.56■■□□□ 1.36
PCDHA1-202ENST00000394633 SAFB2Q14151 953 aaKnown RBP eCLIP23.55■■□□□ 1.36
PCDHA1-202ENST00000394633 WDR63Q8IWG1 891 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms