RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
FAM3A-205ENST00000393572 CFAP70Q5T0N1 1121 aa25.54■■□□□ 1.68
FAM3A-205ENST00000393572 RGS17Q9UGC6 210 aaPredicted RBP25.53■■□□□ 1.68
FAM3A-205ENST00000393572 MEX3CQ5U5Q3 659 aaKnown RBP25.52■■□□□ 1.68
FAM3A-205ENST00000393572 WAPLQ7Z5K2 1190 aa25.52■■□□□ 1.68
FAM3A-205ENST00000393572 DCAF11Q8TEB1 546 aa25.51■■□□□ 1.67
FAM3A-205ENST00000393572 ORAI2Q96SN7 254 aa25.49■■□□□ 1.67
FAM3A-205ENST00000393572 SOS2Q07890 1332 aaPredicted RBP25.47■■□□□ 1.67
FAM3A-205ENST00000393572 NPHP3Q7Z494 1330 aa25.47■■□□□ 1.67
FAM3A-205ENST00000393572 ESCO1Q5FWF5 840 aa25.47■■□□□ 1.67
FAM3A-205ENST00000393572 KDM2AQ9Y2K7 1162 aa25.47■■□□□ 1.67
FAM3A-205ENST00000393572 DLC1Q96QB1 1528 aa25.47■■□□□ 1.67
FAM3A-205ENST00000393572 ZNF772Q68DY9 489 aaPredicted RBP25.46■■□□□ 1.67
FAM3A-205ENST00000393572 PLEKHH1Q9ULM0 1364 aa25.45■■□□□ 1.67
FAM3A-205ENST00000393572 LRP6O75581 1613 aa25.45■■□□□ 1.66
FAM3A-205ENST00000393572 POGKQ9P215 609 aa25.44■■□□□ 1.66
FAM3A-205ENST00000393572 PNPLA6Q8IY17 1366 aa25.44■■□□□ 1.66
FAM3A-205ENST00000393572 DDX17Q92841 729 aaKnown RBP25.43■■□□□ 1.66
FAM3A-205ENST00000393572 ADGRB1O14514 1584 aa25.41■■□□□ 1.66
FAM3A-205ENST00000393572 NUTM2BA6NNL0 878 aaPredicted RBP25.41■■□□□ 1.66
FAM3A-205ENST00000393572 NUTM2EB1AL46 878 aaPredicted RBP25.41■■□□□ 1.66
FAM3A-205ENST00000393572 POTEAQ6S8J7 498 aa25.41■■□□□ 1.66
FAM3A-205ENST00000393572 NUTM2AQ8IVF1 878 aaPredicted RBP25.41■■□□□ 1.66
FAM3A-205ENST00000393572 PRAM1Q96QH2 718 aa25.41■■□□□ 1.66
FAM3A-205ENST00000393572 FMN2Q9NZ56 1722 aa25.39■■□□□ 1.65
FAM3A-205ENST00000393572 KIF1AQ12756 1690 aa25.36■■□□□ 1.65
FAM3A-205ENST00000393572 TRAK1Q9UPV9 953 aa25.36■■□□□ 1.65
FAM3A-205ENST00000393572 EIF3AQ14152 1382 aaKnown RBP25.35■■□□□ 1.65
FAM3A-205ENST00000393572 NUTM2FA1L443 756 aa25.35■■□□□ 1.65
FAM3A-205ENST00000393572 FOXO3O43524 673 aa25.35■■□□□ 1.65
FAM3A-205ENST00000393572 SAFB2Q14151 953 aaKnown RBP eCLIP25.33■■□□□ 1.65
FAM3A-205ENST00000393572 ADGRB2O60241 1585 aa25.32■■□□□ 1.64
FAM3A-205ENST00000393572 ANKARQ7Z5J8 1434 aa25.32■■□□□ 1.64
FAM3A-205ENST00000393572 PXDNQ92626 1479 aa25.32■■□□□ 1.64
FAM3A-205ENST00000393572 PHF8Q9UPP1 1060 aa25.31■■□□□ 1.64
FAM3A-205ENST00000393572 KIAA1210Q9ULL0 1709 aa25.3■■□□□ 1.64
FAM3A-205ENST00000393572 PSME1Q06323 249 aa25.3■■□□□ 1.64
FAM3A-205ENST00000393572 AFF2P51816 1311 aa25.3■■□□□ 1.64
FAM3A-205ENST00000393572 COL22A1Q8NFW1 1626 aaPredicted RBP25.3■■□□□ 1.64
FAM3A-205ENST00000393572 C8orf37Q96NL8 207 aa25.29■■□□□ 1.64
FAM3A-205ENST00000393572 RXRBP28702 533 aa25.26■■□□□ 1.63
FAM3A-205ENST00000393572 NGLY1Q96IV0 654 aa25.26■■□□□ 1.63
FAM3A-205ENST00000393572 ADAMTS2O95450 1211 aa25.25■■□□□ 1.63
FAM3A-205ENST00000393572 KRT28Q7Z3Y7 464 aa25.25■■□□□ 1.63
FAM3A-205ENST00000393572 SPATA31A3Q5VYP0 1347 aa25.24■■□□□ 1.63
FAM3A-205ENST00000393572 MINK1Q8N4C8 1332 aaPredicted RBP25.24■■□□□ 1.63
FAM3A-205ENST00000393572 WASLO00401 505 aaPredicted RBP25.24■■□□□ 1.63
FAM3A-205ENST00000393572 XPCQ01831 940 aaPredicted RBP25.24■■□□□ 1.63
FAM3A-205ENST00000393572 SBNO1A3KN83 1393 aa25.22■■□□□ 1.63
FAM3A-205ENST00000393572 HIRIP3Q9BW71 556 aaPredicted RBP25.22■■□□□ 1.63
FAM3A-205ENST00000393572 CDK12Q9NYV4 1490 aaPredicted RBP25.21■■□□□ 1.63
FAM3A-205ENST00000393572 RGPD8O14715 1765 aaPredicted RBP25.21■■□□□ 1.63
FAM3A-205ENST00000393572 ARHGEF28Q8N1W1 1705 aaKnown RBP25.21■■□□□ 1.63
FAM3A-205ENST00000393572 TULP4Q9NRJ4 1543 aa25.21■■□□□ 1.63
FAM3A-205ENST00000393572 FNBP4Q8N3X1 1017 aaPredicted RBP25.19■■□□□ 1.62
FAM3A-205ENST00000393572 QTRT2Q9H974 415 aaKnown RBP25.19■■□□□ 1.62
FAM3A-205ENST00000393572 TNS3Q68CZ2 1445 aa25.19■■□□□ 1.62
FAM3A-205ENST00000393572 ARHGEF10O15013 1369 aa25.18■■□□□ 1.62
FAM3A-205ENST00000393572 RBM6P78332 1123 aaKnown RBP25.18■■□□□ 1.62
FAM3A-205ENST00000393572 GPRASP1Q5JY77 1395 aa25.18■■□□□ 1.62
FAM3A-205ENST00000393572 L3MBTL2Q969R5 705 aa25.17■■□□□ 1.62
FAM3A-205ENST00000393572 USP21Q9UK80 565 aa25.17■■□□□ 1.62
FAM3A-205ENST00000393572 TRIM26Q12899 539 aaPredicted RBP25.16■■□□□ 1.62
FAM3A-205ENST00000393572 TRPC5Q9UL62 973 aaPredicted RBP25.16■■□□□ 1.62
FAM3A-205ENST00000393572 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
FAM3A-205ENST00000393572 PMFBP1Q8TBY8 1022 aa25.15■■□□□ 1.62
FAM3A-205ENST00000393572 NBPF1Q3BBV0 1214 aa25.14■■□□□ 1.62
FAM3A-205ENST00000393572 HAP1P54257 671 aaPredicted RBP25.13■■□□□ 1.61
FAM3A-205ENST00000393572 SIN3AQ96ST3 1273 aa25.13■■□□□ 1.61
FAM3A-205ENST00000393572 NEUROD1Q13562 356 aa25.12■■□□□ 1.61
FAM3A-205ENST00000393572 NGDNQ8NEJ9 315 aaKnown RBP25.12■■□□□ 1.61
FAM3A-205ENST00000393572 MARF1Q9Y4F3 1742 aaKnown RBP25.12■■□□□ 1.61
FAM3A-205ENST00000393572 PRR36Q9H6K5 1346 aa25.12■■□□□ 1.61
FAM3A-205ENST00000393572 ITSN1Q15811 1721 aa25.11■■□□□ 1.61
FAM3A-205ENST00000393572 LMOD2Q6P5Q4 547 aa25.1■■□□□ 1.61
FAM3A-205ENST00000393572 NUDT16Q96DE0 195 aaKnown RBP25.1■■□□□ 1.61
FAM3A-205ENST00000393572 CDK19Q9BWU1 502 aa25.1■■□□□ 1.61
FAM3A-205ENST00000393572 CENPJQ9HC77 1338 aaPredicted RBP25.1■■□□□ 1.61
FAM3A-205ENST00000393572 ATP7BP35670 1465 aa25.08■■□□□ 1.6
FAM3A-205ENST00000393572 CCDC61Q9Y6R9 512 aa25.07■■□□□ 1.6
FAM3A-205ENST00000393572 ATRNO75882 1429 aa25.06■■□□□ 1.6
FAM3A-205ENST00000393572 ROCK2O75116 1388 aaKnown RBP25.04■■□□□ 1.6
FAM3A-205ENST00000393572 BCL9LQ86UU0 1499 aa25.03■■□□□ 1.6
FAM3A-205ENST00000393572 UNC5CLQ8IV45 518 aa25.03■■□□□ 1.6
FAM3A-205ENST00000393572 TRPM3Q9HCF6 1732 aaPredicted RBP25.03■■□□□ 1.6
FAM3A-205ENST00000393572 SLIT2O94813 1529 aa25.02■■□□□ 1.6
FAM3A-205ENST00000393572 TRPM1Q7Z4N2 1603 aa25.02■■□□□ 1.6
FAM3A-205ENST00000393572 RGS12O14924 1447 aa25.02■■□□□ 1.6
FAM3A-205ENST00000393572 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.01■■□□□ 1.59
FAM3A-205ENST00000393572 PLEKHG3A1L390 1219 aa25.01■■□□□ 1.59
FAM3A-205ENST00000393572 SRPK2P78362 688 aaKnown RBP25■■□□□ 1.59
FAM3A-205ENST00000393572 POLR3AO14802 1390 aaPredicted RBP25■■□□□ 1.59
FAM3A-205ENST00000393572 PAK3O75914 559 aaPredicted RBP24.99■■□□□ 1.59
FAM3A-205ENST00000393572 CABLES1Q8TDN4 633 aa24.99■■□□□ 1.59
FAM3A-205ENST00000393572 TONSLQ96HA7 1378 aa24.99■■□□□ 1.59
FAM3A-205ENST00000393572 ALS2Q96Q42 1657 aa24.99■■□□□ 1.59
FAM3A-205ENST00000393572 GJD4Q96KN9 370 aaPredicted RBP24.98■■□□□ 1.59
FAM3A-205ENST00000393572 UPF1Q92900 1129 aaKnown RBP eCLIP24.97■■□□□ 1.597e-6■■□□□ 13.4
FAM3A-205ENST00000393572 TOPAZ1Q8N9V7 1692 aa24.97■■□□□ 1.59
FAM3A-205ENST00000393572 QRICH2Q9H0J4 1663 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms