RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 VGFO15240 615 aaPredicted RBP19.6■□□□□ 0.73
LAMB1-202ENST00000393559 NGLY1Q96IV0 654 aa19.59■□□□□ 0.73
LAMB1-202ENST00000393559 KDM2AQ9Y2K7 1162 aa19.59■□□□□ 0.73
LAMB1-202ENST00000393559 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.73
LAMB1-202ENST00000393559 ORAI2Q96SN7 254 aa19.58■□□□□ 0.72
LAMB1-202ENST00000393559 NEXMIFQ5QGS0 1516 aa19.57■□□□□ 0.72
LAMB1-202ENST00000393559 NBPF8Q3BBV2 869 aa19.57■□□□□ 0.72
LAMB1-202ENST00000393559 RBM6P78332 1123 aaKnown RBP19.56■□□□□ 0.72
LAMB1-202ENST00000393559 C1orf167Q5SNV9 1468 aa19.55■□□□□ 0.72
LAMB1-202ENST00000393559 ROBO2Q9HCK4 1378 aa19.55■□□□□ 0.72
LAMB1-202ENST00000393559 CDK12Q9NYV4 1490 aaPredicted RBP19.53■□□□□ 0.72
LAMB1-202ENST00000393559 PRAG1Q86YV5 1406 aa19.52■□□□□ 0.72
LAMB1-202ENST00000393559 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
LAMB1-202ENST00000393559 NHSL1Q5SYE7 1610 aa19.51■□□□□ 0.71
LAMB1-202ENST00000393559 STAC3Q96MF2 364 aa19.51■□□□□ 0.71
LAMB1-202ENST00000393559 IFT172Q9UG01 1749 aa19.51■□□□□ 0.71
LAMB1-202ENST00000393559 MYOM2P54296 1465 aa19.5■□□□□ 0.71
LAMB1-202ENST00000393559 USP21Q9UK80 565 aa19.5■□□□□ 0.71
LAMB1-202ENST00000393559 RGS12O14924 1447 aa19.5■□□□□ 0.71
LAMB1-202ENST00000393559 PTCH1Q13635 1447 aa19.5■□□□□ 0.71
LAMB1-202ENST00000393559 SOS2Q07890 1332 aaPredicted RBP19.5■□□□□ 0.71
LAMB1-202ENST00000393559 NALCNQ8IZF0 1738 aa19.49■□□□□ 0.71
LAMB1-202ENST00000393559 ESCO1Q5FWF5 840 aa19.49■□□□□ 0.71
LAMB1-202ENST00000393559 RALGAPBQ86X10 1494 aa19.48■□□□□ 0.71
LAMB1-202ENST00000393559 PPLO60437 1756 aa19.48■□□□□ 0.71
LAMB1-202ENST00000393559 STK26Q9P289 416 aa19.47■□□□□ 0.71
LAMB1-202ENST00000393559 NUTM2FA1L443 756 aa19.46■□□□□ 0.71
LAMB1-202ENST00000393559 TRPC5Q9UL62 973 aaPredicted RBP19.46■□□□□ 0.71
LAMB1-202ENST00000393559 ADGRF5Q8IZF2 1346 aa19.46■□□□□ 0.71
LAMB1-202ENST00000393559 SRCAPQ6ZRS2 3230 aa19.45■□□□□ 0.7
LAMB1-202ENST00000393559 XPCQ01831 940 aaPredicted RBP19.45■□□□□ 0.7
LAMB1-202ENST00000393559 NRXN1Q9ULB1 1477 aa19.44■□□□□ 0.7
LAMB1-202ENST00000393559 FOXO3O43524 673 aa19.44■□□□□ 0.7
LAMB1-202ENST00000393559 TRPM1Q7Z4N2 1603 aa19.43■□□□□ 0.7
LAMB1-202ENST00000393559 WAPLQ7Z5K2 1190 aa19.43■□□□□ 0.7
LAMB1-202ENST00000393559 FNBP4Q8N3X1 1017 aaPredicted RBP19.42■□□□□ 0.7
LAMB1-202ENST00000393559 NPHP3Q7Z494 1330 aa19.42■□□□□ 0.7
LAMB1-202ENST00000393559 ROCK2O75116 1388 aaKnown RBP19.42■□□□□ 0.7
LAMB1-202ENST00000393559 TMEM132EQ6IEE7 984 aa19.4■□□□□ 0.7
LAMB1-202ENST00000393559 ATAD2Q6PL18 1390 aa19.4■□□□□ 0.7
LAMB1-202ENST00000393559 PIK3C2GO75747 1445 aa19.4■□□□□ 0.7
LAMB1-202ENST00000393559 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
LAMB1-202ENST00000393559 NBPF1Q3BBV0 1214 aa19.38■□□□□ 0.69
LAMB1-202ENST00000393559 GPRASP1Q5JY77 1395 aa19.38■□□□□ 0.69
LAMB1-202ENST00000393559 CARD11Q9BXL7 1154 aa19.38■□□□□ 0.69
LAMB1-202ENST00000393559 EIF4G2P78344 907 aaKnown RBP eCLIP19.37■□□□□ 0.69
LAMB1-202ENST00000393559 KIAA1210Q9ULL0 1709 aa19.37■□□□□ 0.69
LAMB1-202ENST00000393559 CFAP70Q5T0N1 1121 aa19.36■□□□□ 0.69
LAMB1-202ENST00000393559 LRPPRCP42704 1394 aaKnown RBP19.35■□□□□ 0.69
LAMB1-202ENST00000393559 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
LAMB1-202ENST00000393559 LAMC1P11047 1609 aa19.35■□□□□ 0.69
LAMB1-202ENST00000393559 USP47Q96K76 1375 aa19.34■□□□□ 0.69
LAMB1-202ENST00000393559 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
LAMB1-202ENST00000393559 ATRNO75882 1429 aa19.34■□□□□ 0.69
LAMB1-202ENST00000393559 PLEKHH1Q9ULM0 1364 aa19.33■□□□□ 0.69
LAMB1-202ENST00000393559 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.68
LAMB1-202ENST00000393559 C14orf93Q9H972 538 aaKnown RBP19.33■□□□□ 0.68
LAMB1-202ENST00000393559 GJD4Q96KN9 370 aaPredicted RBP19.32■□□□□ 0.68
LAMB1-202ENST00000393559 PXDNQ92626 1479 aa19.32■□□□□ 0.68
LAMB1-202ENST00000393559 BCL9LQ86UU0 1499 aa19.31■□□□□ 0.68
LAMB1-202ENST00000393559 CDC42BPGQ6DT37 1551 aa19.31■□□□□ 0.68
LAMB1-202ENST00000393559 ABCC11Q96J66 1382 aa19.31■□□□□ 0.68
LAMB1-202ENST00000393559 KRT28Q7Z3Y7 464 aa19.3■□□□□ 0.68
LAMB1-202ENST00000393559 ZRANB1Q9UGI0 708 aa19.3■□□□□ 0.68
LAMB1-202ENST00000393559 HAP1P54257 671 aaPredicted RBP19.29■□□□□ 0.68
LAMB1-202ENST00000393559 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
LAMB1-202ENST00000393559 EP400Q96L91 3159 aa19.28■□□□□ 0.68
LAMB1-202ENST00000393559 ADGRB1O14514 1584 aa19.27■□□□□ 0.68
LAMB1-202ENST00000393559 SPATA31A3Q5VYP0 1347 aa19.27■□□□□ 0.68
LAMB1-202ENST00000393559 TECPR2O15040 1411 aa19.27■□□□□ 0.68
LAMB1-202ENST00000393559 SAFB2Q14151 953 aaKnown RBP eCLIP19.27■□□□□ 0.68
LAMB1-202ENST00000393559 LMOD2Q6P5Q4 547 aa19.27■□□□□ 0.68
LAMB1-202ENST00000393559 UNC5CLQ8IV45 518 aa19.27■□□□□ 0.68
LAMB1-202ENST00000393559 CCDC125Q86Z20 511 aa19.26■□□□□ 0.67
LAMB1-202ENST00000393559 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
LAMB1-202ENST00000393559 CABLES1Q8TDN4 633 aa19.25■□□□□ 0.67
LAMB1-202ENST00000393559 PSME1Q06323 249 aa19.24■□□□□ 0.67
LAMB1-202ENST00000393559 PHF8Q9UPP1 1060 aa19.24■□□□□ 0.67
LAMB1-202ENST00000393559 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
LAMB1-202ENST00000393559 CCDC9Q9Y3X0 531 aaKnown RBP19.23■□□□□ 0.67
LAMB1-202ENST00000393559 SIRT1Q96EB6 747 aa19.22■□□□□ 0.67
LAMB1-202ENST00000393559 EIF3AQ14152 1382 aaKnown RBP19.21■□□□□ 0.67
LAMB1-202ENST00000393559 PRAM1Q96QH2 718 aa19.21■□□□□ 0.67
LAMB1-202ENST00000393559 POGKQ9P215 609 aa19.21■□□□□ 0.67
LAMB1-202ENST00000393559 PMFBP1Q8TBY8 1022 aa19.2■□□□□ 0.66
LAMB1-202ENST00000393559 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
LAMB1-202ENST00000393559 TRAK1Q9UPV9 953 aa19.19■□□□□ 0.66
LAMB1-202ENST00000393559 SLIT2O94813 1529 aa19.18■□□□□ 0.66
LAMB1-202ENST00000393559 SF3B2Q13435 895 aaKnown RBP19.17■□□□□ 0.66
LAMB1-202ENST00000393559 DEFB132Q7Z7B7 95 aa19.17■□□□□ 0.66
LAMB1-202ENST00000393559 A0A0G2JS52 829 aa19.16■□□□□ 0.66
LAMB1-202ENST00000393559 MYT1Q01538 1121 aa19.16■□□□□ 0.66
LAMB1-202ENST00000393559 VPS72Q15906 364 aa19.16■□□□□ 0.66
LAMB1-202ENST00000393559 TNS3Q68CZ2 1445 aa19.16■□□□□ 0.66
LAMB1-202ENST00000393559 FMN2Q9NZ56 1722 aa19.15■□□□□ 0.66
LAMB1-202ENST00000393559 FAM83GA6ND36 823 aa19.14■□□□□ 0.65
LAMB1-202ENST00000393559 C11orf95C9JLR9 678 aaPredicted RBP19.14■□□□□ 0.65
LAMB1-202ENST00000393559 TESK2Q96S53 571 aa19.14■□□□□ 0.65
LAMB1-202ENST00000393559 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
LAMB1-202ENST00000393559 WASHC2AQ641Q2 1341 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms