RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 FMN2Q9NZ56 1722 aa18.4■□□□□ 0.54
CTSC-202ENST00000393301 PXDNQ92626 1479 aa18.4■□□□□ 0.54
CTSC-202ENST00000393301 SIRT1Q96EB6 747 aa18.4■□□□□ 0.54
CTSC-202ENST00000393301 ORAI2Q96SN7 254 aa18.39■□□□□ 0.53
CTSC-202ENST00000393301 DDX17Q92841 729 aaKnown RBP18.38■□□□□ 0.53
CTSC-202ENST00000393301 AFF2P51816 1311 aa18.38■□□□□ 0.53
CTSC-202ENST00000393301 YTHDC2Q9H6S0 1430 aaKnown RBP18.38■□□□□ 0.53
CTSC-202ENST00000393301 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
CTSC-202ENST00000393301 NPHP3Q7Z494 1330 aa18.36■□□□□ 0.53
CTSC-202ENST00000393301 DLC1Q96QB1 1528 aa18.36■□□□□ 0.53
CTSC-202ENST00000393301 MARF1Q9Y4F3 1742 aaKnown RBP18.36■□□□□ 0.53
CTSC-202ENST00000393301 RAB3GAP2Q9H2M9 1393 aa18.35■□□□□ 0.53
CTSC-202ENST00000393301 RXRBP28702 533 aa18.35■□□□□ 0.53
CTSC-202ENST00000393301 C14orf93Q9H972 538 aaKnown RBP18.35■□□□□ 0.53
CTSC-202ENST00000393301 NUTM2BA6NNL0 878 aaPredicted RBP18.34■□□□□ 0.53
CTSC-202ENST00000393301 NUTM2EB1AL46 878 aaPredicted RBP18.34■□□□□ 0.53
CTSC-202ENST00000393301 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
CTSC-202ENST00000393301 NUTM2AQ8IVF1 878 aaPredicted RBP18.34■□□□□ 0.53
CTSC-202ENST00000393301 PLEKHH1Q9ULM0 1364 aa18.32■□□□□ 0.52
CTSC-202ENST00000393301 HRCP23327 699 aa18.32■□□□□ 0.52
CTSC-202ENST00000393301 ADGRB1O14514 1584 aa18.32■□□□□ 0.52
CTSC-202ENST00000393301 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
CTSC-202ENST00000393301 WAPLQ7Z5K2 1190 aa18.31■□□□□ 0.52
CTSC-202ENST00000393301 FNBP4Q8N3X1 1017 aaPredicted RBP18.31■□□□□ 0.52
CTSC-202ENST00000393301 RGS12O14924 1447 aa18.31■□□□□ 0.52
CTSC-202ENST00000393301 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.3■□□□□ 0.52
CTSC-202ENST00000393301 RBM6P78332 1123 aaKnown RBP18.3■□□□□ 0.52
CTSC-202ENST00000393301 UPF1Q92900 1129 aaKnown RBP eCLIP18.3■□□□□ 0.52
CTSC-202ENST00000393301 TMEM132EQ6IEE7 984 aa18.29■□□□□ 0.52
CTSC-202ENST00000393301 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
CTSC-202ENST00000393301 DHX57Q6P158 1386 aaKnown RBP18.29■□□□□ 0.52
CTSC-202ENST00000393301 ESCO1Q5FWF5 840 aa18.28■□□□□ 0.52
CTSC-202ENST00000393301 ATRNO75882 1429 aa18.28■□□□□ 0.52
CTSC-202ENST00000393301 STAC3Q96MF2 364 aa18.27■□□□□ 0.52
CTSC-202ENST00000393301 STK26Q9P289 416 aa18.27■□□□□ 0.52
CTSC-202ENST00000393301 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.51
CTSC-202ENST00000393301 QTRT2Q9H974 415 aaKnown RBP18.26■□□□□ 0.51
CTSC-202ENST00000393301 ANKARQ7Z5J8 1434 aa18.25■□□□□ 0.51
CTSC-202ENST00000393301 EP400Q96L91 3159 aa18.24■□□□□ 0.51
CTSC-202ENST00000393301 USP32Q8NFA0 1604 aa18.24■□□□□ 0.51
CTSC-202ENST00000393301 FOXO3O43524 673 aa18.24■□□□□ 0.51
CTSC-202ENST00000393301 CFAP70Q5T0N1 1121 aa18.24■□□□□ 0.51
CTSC-202ENST00000393301 NGLY1Q96IV0 654 aa18.24■□□□□ 0.51
CTSC-202ENST00000393301 BCL9LQ86UU0 1499 aa18.24■□□□□ 0.51
CTSC-202ENST00000393301 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
CTSC-202ENST00000393301 ADAMTS2O95450 1211 aa18.22■□□□□ 0.51
CTSC-202ENST00000393301 TRPC5Q9UL62 973 aaPredicted RBP18.22■□□□□ 0.51
CTSC-202ENST00000393301 SLIT2O94813 1529 aa18.22■□□□□ 0.51
CTSC-202ENST00000393301 ABCA3Q99758 1704 aa18.21■□□□□ 0.51
CTSC-202ENST00000393301 SBNO1A3KN83 1393 aa18.21■□□□□ 0.51
CTSC-202ENST00000393301 USP21Q9UK80 565 aa18.21■□□□□ 0.51
CTSC-202ENST00000393301 TNS3Q68CZ2 1445 aa18.21■□□□□ 0.51
CTSC-202ENST00000393301 NWD2Q9ULI1 1742 aa18.19■□□□□ 0.5
CTSC-202ENST00000393301 TRPM3Q9HCF6 1732 aaPredicted RBP18.18■□□□□ 0.5
CTSC-202ENST00000393301 PRAM1Q96QH2 718 aa18.18■□□□□ 0.5
CTSC-202ENST00000393301 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
CTSC-202ENST00000393301 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
CTSC-202ENST00000393301 KIAA1210Q9ULL0 1709 aa18.17■□□□□ 0.5
CTSC-202ENST00000393301 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
CTSC-202ENST00000393301 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
CTSC-202ENST00000393301 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
CTSC-202ENST00000393301 ATAD2Q6PL18 1390 aa18.16■□□□□ 0.5
CTSC-202ENST00000393301 NUTM2FA1L443 756 aa18.15■□□□□ 0.5
CTSC-202ENST00000393301 XPCQ01831 940 aaPredicted RBP18.15■□□□□ 0.5
CTSC-202ENST00000393301 KRT28Q7Z3Y7 464 aa18.15■□□□□ 0.5
CTSC-202ENST00000393301 ARHGEF10O15013 1369 aa18.15■□□□□ 0.5
CTSC-202ENST00000393301 GLI3P10071 1580 aa18.14■□□□□ 0.49
CTSC-202ENST00000393301 PSME1Q06323 249 aa18.14■□□□□ 0.49
CTSC-202ENST00000393301 PLCH1Q4KWH8 1693 aa18.13■□□□□ 0.49
CTSC-202ENST00000393301 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
CTSC-202ENST00000393301 CRYBG1Q9Y4K1 1723 aa18.12■□□□□ 0.49
CTSC-202ENST00000393301 UNC5CLQ8IV45 518 aa18.11■□□□□ 0.49
CTSC-202ENST00000393301 GJD4Q96KN9 370 aaPredicted RBP18.11■□□□□ 0.49
CTSC-202ENST00000393301 RALGAPBQ86X10 1494 aa18.11■□□□□ 0.49
CTSC-202ENST00000393301 DCAF11Q8TEB1 546 aa18.1■□□□□ 0.49
CTSC-202ENST00000393301 POGKQ9P215 609 aa18.1■□□□□ 0.49
CTSC-202ENST00000393301 ATP7BP35670 1465 aa18.09■□□□□ 0.49
CTSC-202ENST00000393301 PRR36Q9H6K5 1346 aa18.09■□□□□ 0.49
CTSC-202ENST00000393301 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
CTSC-202ENST00000393301 SRCAPQ6ZRS2 3230 aa18.08■□□□□ 0.48
CTSC-202ENST00000393301 TOPAZ1Q8N9V7 1692 aa18.08■□□□□ 0.48
CTSC-202ENST00000393301 WASLO00401 505 aaPredicted RBP18.07■□□□□ 0.48
CTSC-202ENST00000393301 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
CTSC-202ENST00000393301 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
CTSC-202ENST00000393301 BRWD3Q6RI45 1802 aa18.06■□□□□ 0.48
CTSC-202ENST00000393301 COL14A1Q05707 1796 aaKnown RBP18.05■□□□□ 0.48
CTSC-202ENST00000393301 VPS72Q15906 364 aa18.05■□□□□ 0.48
CTSC-202ENST00000393301 CCDC125Q86Z20 511 aa18.05■□□□□ 0.48
CTSC-202ENST00000393301 ONECUT3O60422 494 aaPredicted RBP18.04■□□□□ 0.48
CTSC-202ENST00000393301 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
CTSC-202ENST00000393301 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
CTSC-202ENST00000393301 MINK1Q8N4C8 1332 aaPredicted RBP18.02■□□□□ 0.48
CTSC-202ENST00000393301 PMFBP1Q8TBY8 1022 aa18.02■□□□□ 0.48
CTSC-202ENST00000393301 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
CTSC-202ENST00000393301 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
CTSC-202ENST00000393301 CABLES1Q8TDN4 633 aa18■□□□□ 0.47
CTSC-202ENST00000393301 PHRF1Q9P1Y6 1649 aaKnown RBP17.99■□□□□ 0.47
CTSC-202ENST00000393301 BLMP54132 1417 aaPredicted RBP17.98■□□□□ 0.47
CTSC-202ENST00000393301 FAM83GA6ND36 823 aa17.98■□□□□ 0.47
CTSC-202ENST00000393301 TRIM26Q12899 539 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms