RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 ADAMTS13Q76LX8 1427 aa16.64■□□□□ 0.25
TMCO1-202ENST00000392129 CARD14Q9BXL6 1004 aa16.64■□□□□ 0.25
TMCO1-202ENST00000392129 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
TMCO1-202ENST00000392129 NPC1L1Q9UHC9 1359 aa16.63■□□□□ 0.25
TMCO1-202ENST00000392129 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
TMCO1-202ENST00000392129 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
TMCO1-202ENST00000392129 SIRT1Q96EB6 747 aa16.63■□□□□ 0.25
TMCO1-202ENST00000392129 CABP2Q9NPB3 220 aa16.63■□□□□ 0.25
TMCO1-202ENST00000392129 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
TMCO1-202ENST00000392129 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
TMCO1-202ENST00000392129 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
TMCO1-202ENST00000392129 PLEKHH1Q9ULM0 1364 aa16.6■□□□□ 0.25
TMCO1-202ENST00000392129 TECPR2O15040 1411 aa16.6■□□□□ 0.25
TMCO1-202ENST00000392129 MED14O60244 1454 aa16.6■□□□□ 0.25
TMCO1-202ENST00000392129 SLC26A8Q96RN1 970 aa16.59■□□□□ 0.25
TMCO1-202ENST00000392129 CDK19Q9BWU1 502 aa16.58■□□□□ 0.25
TMCO1-202ENST00000392129 TBX22Q9Y458 520 aa16.58■□□□□ 0.25
TMCO1-202ENST00000392129 CEP170BQ9Y4F5 1589 aaPredicted RBP16.58■□□□□ 0.25
TMCO1-202ENST00000392129 FAM135BQ49AJ0 1406 aa16.58■□□□□ 0.24
TMCO1-202ENST00000392129 ATAD2Q6PL18 1390 aa16.58■□□□□ 0.24
TMCO1-202ENST00000392129 NINLQ9Y2I6 1382 aa16.58■□□□□ 0.24
TMCO1-202ENST00000392129 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
TMCO1-202ENST00000392129 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
TMCO1-202ENST00000392129 ANKRD36BQ8N2N9 1353 aa16.56■□□□□ 0.24
TMCO1-202ENST00000392129 PPP2R1AP30153 589 aa16.55■□□□□ 0.24
TMCO1-202ENST00000392129 NSD3Q9BZ95 1437 aa16.55■□□□□ 0.24
TMCO1-202ENST00000392129 KNDC1Q76NI1 1749 aa16.55■□□□□ 0.24
TMCO1-202ENST00000392129 CPS1P31327 1500 aa16.54■□□□□ 0.24
TMCO1-202ENST00000392129 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
TMCO1-202ENST00000392129 ROBO2Q9HCK4 1378 aa16.53■□□□□ 0.24
TMCO1-202ENST00000392129 WASLO00401 505 aaPredicted RBP16.53■□□□□ 0.24
TMCO1-202ENST00000392129 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
TMCO1-202ENST00000392129 ANKLE2Q86XL3 938 aa16.53■□□□□ 0.24
TMCO1-202ENST00000392129 TERF2IPQ9NYB0 399 aa16.51■□□□□ 0.23
TMCO1-202ENST00000392129 AMOTL2Q9Y2J4 779 aa16.51■□□□□ 0.23
TMCO1-202ENST00000392129 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
TMCO1-202ENST00000392129 ZNF142P52746 1687 aaPredicted RBP16.51■□□□□ 0.23
TMCO1-202ENST00000392129 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
TMCO1-202ENST00000392129 DIP2AQ14689 1571 aa16.5■□□□□ 0.23
TMCO1-202ENST00000392129 A0A1W2PP64 1363 aa16.5■□□□□ 0.23
TMCO1-202ENST00000392129 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
TMCO1-202ENST00000392129 MORC1Q86VD1 984 aa16.48■□□□□ 0.23
TMCO1-202ENST00000392129 CD163L1Q9NR16 1453 aa16.48■□□□□ 0.23
TMCO1-202ENST00000392129 USP32Q8NFA0 1604 aa16.47■□□□□ 0.23
TMCO1-202ENST00000392129 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
TMCO1-202ENST00000392129 PIK3R4Q99570 1358 aa16.47■□□□□ 0.23
TMCO1-202ENST00000392129 NSD2O96028 1365 aa16.46■□□□□ 0.23
TMCO1-202ENST00000392129 NUDT16Q96DE0 195 aaKnown RBP16.46■□□□□ 0.23
TMCO1-202ENST00000392129 PTCH1Q13635 1447 aa16.46■□□□□ 0.23
TMCO1-202ENST00000392129 CCDC61Q9Y6R9 512 aa16.45■□□□□ 0.22
TMCO1-202ENST00000392129 INSRP06213 1382 aa16.44■□□□□ 0.22
TMCO1-202ENST00000392129 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.43■□□□□ 0.22
TMCO1-202ENST00000392129 KCNA6P17658 529 aa16.43■□□□□ 0.22
TMCO1-202ENST00000392129 ATP7BP35670 1465 aa16.43■□□□□ 0.22
TMCO1-202ENST00000392129 PPIP5K1Q6PFW1 1433 aa16.42■□□□□ 0.22
TMCO1-202ENST00000392129 FYB1O15117 783 aa16.42■□□□□ 0.22
TMCO1-202ENST00000392129 ADGRB2O60241 1585 aa16.42■□□□□ 0.22
TMCO1-202ENST00000392129 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
TMCO1-202ENST00000392129 PRR36Q9H6K5 1346 aa16.41■□□□□ 0.22
TMCO1-202ENST00000392129 TNNT2P45379 298 aaPredicted RBP16.41■□□□□ 0.22
TMCO1-202ENST00000392129 CPSF1Q10570 1443 aaKnown RBP16.4■□□□□ 0.22
TMCO1-202ENST00000392129 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
TMCO1-202ENST00000392129 GGNBP2Q9H3C7 697 aa16.4■□□□□ 0.22
TMCO1-202ENST00000392129 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
TMCO1-202ENST00000392129 XRN1Q8IZH2 1706 aaKnown RBP16.4■□□□□ 0.22
TMCO1-202ENST00000392129 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
TMCO1-202ENST00000392129 NPHP4O75161 1426 aaPredicted RBP16.39■□□□□ 0.21
TMCO1-202ENST00000392129 BLMP54132 1417 aaPredicted RBP16.38■□□□□ 0.21
TMCO1-202ENST00000392129 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
TMCO1-202ENST00000392129 SENP3-EIF4A1A0A087X0R7 540 aa16.37■□□□□ 0.21
TMCO1-202ENST00000392129 PLEKHG3A1L390 1219 aa16.36■□□□□ 0.21
TMCO1-202ENST00000392129 NUTM2FA1L443 756 aa16.36■□□□□ 0.21
TMCO1-202ENST00000392129 MTHFSP49914 203 aa16.36■□□□□ 0.21
TMCO1-202ENST00000392129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.36■□□□□ 0.21
TMCO1-202ENST00000392129 EDC4Q6P2E9 1401 aaKnown RBP16.35■□□□□ 0.21
TMCO1-202ENST00000392129 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
TMCO1-202ENST00000392129 CHD2O14647 1828 aaKnown RBP16.34■□□□□ 0.21
TMCO1-202ENST00000392129 KDM4FA0A1W2PPD8 638 aa16.33■□□□□ 0.2
TMCO1-202ENST00000392129 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
TMCO1-202ENST00000392129 ACEP12821 1306 aa16.32■□□□□ 0.2
TMCO1-202ENST00000392129 SALL2Q9Y467 1007 aaPredicted RBP16.31■□□□□ 0.2
TMCO1-202ENST00000392129 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
TMCO1-202ENST00000392129 NME9Q86XW9 330 aa16.3■□□□□ 0.2
TMCO1-202ENST00000392129 SMG6Q86US8 1419 aaKnown RBP16.3■□□□□ 0.2
TMCO1-202ENST00000392129 TOPAZ1Q8N9V7 1692 aa16.29■□□□□ 0.2
TMCO1-202ENST00000392129 NUDCQ9Y266 331 aa16.29■□□□□ 0.2
TMCO1-202ENST00000392129 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
TMCO1-202ENST00000392129 ANKARQ7Z5J8 1434 aa16.29■□□□□ 0.2
TMCO1-202ENST00000392129 KIF20BQ96Q89 1820 aa16.28■□□□□ 0.2
TMCO1-202ENST00000392129 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
TMCO1-202ENST00000392129 MON2Q7Z3U7 1717 aa16.28■□□□□ 0.2
TMCO1-202ENST00000392129 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
TMCO1-202ENST00000392129 PDE3BQ13370 1112 aa16.28■□□□□ 0.2
TMCO1-202ENST00000392129 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
TMCO1-202ENST00000392129 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
TMCO1-202ENST00000392129 TTC21BQ7Z4L5 1316 aa16.27■□□□□ 0.2
TMCO1-202ENST00000392129 USP6P35125 1406 aa16.27■□□□□ 0.19
TMCO1-202ENST00000392129 COG3Q96JB2 828 aa16.27■□□□□ 0.19
TMCO1-202ENST00000392129 ZRANB1Q9UGI0 708 aa16.27■□□□□ 0.19
TMCO1-202ENST00000392129 ITSN1Q15811 1721 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms