RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 OATP04181 439 aa4.07□□□□□ -1.76
TRAV41-201ENST00000390468 CENPBP07199 599 aaPredicted RBP4.07□□□□□ -1.76
TRAV41-201ENST00000390468 FUT2Q10981 343 aa4.07□□□□□ -1.76
TRAV41-201ENST00000390468 VSIG10Q8N0Z9 540 aa4.07□□□□□ -1.76
TRAV41-201ENST00000390468 PXYLP1Q8TE99 480 aa4.07□□□□□ -1.76
TRAV41-201ENST00000390468 BCL11AQ9H165 835 aa4.07□□□□□ -1.76
TRAV41-201ENST00000390468 PRDM9Q9NQV7 894 aa4.07□□□□□ -1.76
TRAV41-201ENST00000390468 PKD2L1Q9P0L9 805 aa4.07□□□□□ -1.76
TRAV41-201ENST00000390468 GMPR2Q9P2T1 348 aaKnown RBP4.07□□□□□ -1.76
TRAV41-201ENST00000390468 BIVM-ERCC5R4GMW8 1640 aa4.06□□□□□ -1.76
TRAV41-201ENST00000390468 ABCC8Q09428 1581 aa4.06□□□□□ -1.76
TRAV41-201ENST00000390468 CD2BP2O95400 341 aaKnown RBP4.06□□□□□ -1.76
TRAV41-201ENST00000390468 RBM26Q5T8P6 1007 aaKnown RBP4.06□□□□□ -1.76
TRAV41-201ENST00000390468 TREML4Q6UXN2 200 aa4.06□□□□□ -1.76
TRAV41-201ENST00000390468 METTL3Q86U44 580 aaKnown RBP4.06□□□□□ -1.76
TRAV41-201ENST00000390468 ZBTB24O43167 697 aaPredicted RBP4.05□□□□□ -1.76
TRAV41-201ENST00000390468 FMNL1O95466 1100 aaPredicted RBP4.05□□□□□ -1.76
TRAV41-201ENST00000390468 FECHP22830 423 aa4.05□□□□□ -1.76
TRAV41-201ENST00000390468 DAXXQ9UER7 740 aaPredicted RBP4.05□□□□□ -1.76
TRAV41-201ENST00000390468 LAMC3Q9Y6N6 1575 aa4.05□□□□□ -1.76
TRAV41-201ENST00000390468 WFS1O76024 890 aa4.04□□□□□ -1.76
TRAV41-201ENST00000390468 ATP6V1AP38606 617 aa4.04□□□□□ -1.76
TRAV41-201ENST00000390468 RPIAP49247 311 aa4.04□□□□□ -1.76
TRAV41-201ENST00000390468 HIC1Q14526 733 aa4.04□□□□□ -1.76
TRAV41-201ENST00000390468 MORN1Q5T089 497 aa4.04□□□□□ -1.76
TRAV41-201ENST00000390468 P3H3Q8IVL6 736 aa4.04□□□□□ -1.76
TRAV41-201ENST00000390468 SLC27A5Q9Y2P5 690 aa4.04□□□□□ -1.76
TRAV41-201ENST00000390468 RNF19BQ6ZMZ0 732 aa4.03□□□□□ -1.76
TRAV41-201ENST00000390468 FAM160A2Q8N612 972 aaPredicted RBP4.03□□□□□ -1.76
TRAV41-201ENST00000390468 TOR4AQ9NXH8 423 aa4.03□□□□□ -1.76
TRAV41-201ENST00000390468 TOP2BQ02880 1626 aa4.03□□□□□ -1.77
TRAV41-201ENST00000390468 SYNJ1O43426 1573 aa4.02□□□□□ -1.77
TRAV41-201ENST00000390468 GNPATO15228 680 aa4.02□□□□□ -1.77
TRAV41-201ENST00000390468 LMOD2Q6P5Q4 547 aa4.02□□□□□ -1.77
TRAV41-201ENST00000390468 CCDC24Q8N4L8 307 aa4.02□□□□□ -1.77
TRAV41-201ENST00000390468 THAP11Q96EK4 314 aa4.02□□□□□ -1.77
TRAV41-201ENST00000390468 CFTRP13569 1480 aa4.01□□□□□ -1.77
TRAV41-201ENST00000390468 GCGRP47871 477 aa4.01□□□□□ -1.77
TRAV41-201ENST00000390468 SULF1Q8IWU6 871 aa4.01□□□□□ -1.77
TRAV41-201ENST00000390468 WDR97A6NE52 1622 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 J3QL48 77 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 AVPP01185 164 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 SNRPBP14678 240 aaKnown RBP4□□□□□ -1.77
TRAV41-201ENST00000390468 TRIM32Q13049 653 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 CTC1Q2NKJ3 1217 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 SMYD5Q6GMV2 418 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 CRIPAKQ8N1N5 446 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 MRGPRX2Q96LB1 330 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 PHOX2BQ99453 314 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 ATP13A2Q9NQ11 1180 aa4□□□□□ -1.77
TRAV41-201ENST00000390468 NESP48681 1621 aa3.99□□□□□ -1.77
TRAV41-201ENST00000390468 DNMBPQ6XZF7 1577 aa3.99□□□□□ -1.77
TRAV41-201ENST00000390468 WRNQ14191 1432 aaPredicted RBP eCLIP3.99□□□□□ -1.77
TRAV41-201ENST00000390468 SMPD1P17405 629 aa3.99□□□□□ -1.77
TRAV41-201ENST00000390468 GRIPAP1Q4V328 841 aa3.99□□□□□ -1.77
TRAV41-201ENST00000390468 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
TRAV41-201ENST00000390468 BRICD5Q6PL45 260 aa3.99□□□□□ -1.77
TRAV41-201ENST00000390468 SNIP1Q8TAD8 396 aaKnown RBP3.99□□□□□ -1.77
TRAV41-201ENST00000390468 PBRM1Q86U86 1689 aa3.99□□□□□ -1.77
TRAV41-201ENST00000390468 CADPSQ9ULU8 1353 aa3.99□□□□□ -1.77
TRAV41-201ENST00000390468 TESPA1A2RU30 521 aaPredicted RBP3.98□□□□□ -1.77
TRAV41-201ENST00000390468 WNT7AO00755 349 aa3.98□□□□□ -1.77
TRAV41-201ENST00000390468 NFX1Q12986 1120 aaKnown RBP3.98□□□□□ -1.77
TRAV41-201ENST00000390468 GPIHBP1Q8IV16 184 aa3.98□□□□□ -1.77
TRAV41-201ENST00000390468 HPS1Q92902 700 aa3.98□□□□□ -1.77
TRAV41-201ENST00000390468 HLA-CQ95604 372 aa3.98□□□□□ -1.77
TRAV41-201ENST00000390468 KDM2AQ9Y2K7 1162 aa3.98□□□□□ -1.77
TRAV41-201ENST00000390468 CUX1P39880 1505 aa3.98□□□□□ -1.77
TRAV41-201ENST00000390468 FANCD2Q9BXW9 1451 aa3.98□□□□□ -1.77
TRAV41-201ENST00000390468 CEP164Q9UPV0 1460 aa3.98□□□□□ -1.77
TRAV41-201ENST00000390468 GPR37O15354 613 aa3.97□□□□□ -1.77
TRAV41-201ENST00000390468 ALDH1A1P00352 501 aa3.97□□□□□ -1.77
TRAV41-201ENST00000390468 INSM1Q01101 510 aaPredicted RBP3.97□□□□□ -1.77
TRAV41-201ENST00000390468 Q3C1V9 767 aa3.97□□□□□ -1.77
TRAV41-201ENST00000390468 MSS51Q4VC12 460 aa3.97□□□□□ -1.77
TRAV41-201ENST00000390468 STK17AQ9UEE5 414 aa3.97□□□□□ -1.77
TRAV41-201ENST00000390468 TERTO14746 1132 aaKnown RBP3.96□□□□□ -1.78
TRAV41-201ENST00000390468 BMP1P13497 986 aa3.96□□□□□ -1.78
TRAV41-201ENST00000390468 VEGFBP49765 207 aa3.96□□□□□ -1.78
TRAV41-201ENST00000390468 SMCPP49901 116 aaPredicted RBP3.96□□□□□ -1.78
TRAV41-201ENST00000390468 GUCA2AQ02747 115 aa3.96□□□□□ -1.78
TRAV41-201ENST00000390468 RC3H1Q5TC82 1133 aaKnown RBP3.96□□□□□ -1.78
TRAV41-201ENST00000390468 TRIM47Q96LD4 638 aa3.96□□□□□ -1.78
TRAV41-201ENST00000390468 USB1Q9BQ65 265 aaKnown RBP3.96□□□□□ -1.78
TRAV41-201ENST00000390468 SENP2Q9HC62 589 aa3.96□□□□□ -1.78
TRAV41-201ENST00000390468 THOC2Q8NI27 1593 aaKnown RBP3.96□□□□□ -1.78
TRAV41-201ENST00000390468 CTTNBP2Q8WZ74 1663 aa3.96□□□□□ -1.78
TRAV41-201ENST00000390468 PDS5BQ9NTI5 1447 aa3.95□□□□□ -1.78
TRAV41-201ENST00000390468 KIF21BO75037 1637 aa3.95□□□□□ -1.78
TRAV41-201ENST00000390468 EIF5BO60841 1220 aaKnown RBP3.95□□□□□ -1.78
TRAV41-201ENST00000390468 KDM4AO75164 1064 aa3.95□□□□□ -1.78
TRAV41-201ENST00000390468 ZEB1P37275 1124 aaPredicted RBP3.95□□□□□ -1.78
TRAV41-201ENST00000390468 MDM2Q00987 491 aaPredicted RBP3.95□□□□□ -1.78
TRAV41-201ENST00000390468 TPRNQ4KMQ1 711 aa3.95□□□□□ -1.78
TRAV41-201ENST00000390468 FAM9AQ8IZU1 332 aaPredicted RBP3.95□□□□□ -1.78
TRAV41-201ENST00000390468 SYMPKQ92797 1274 aaKnown RBP3.95□□□□□ -1.78
TRAV41-201ENST00000390468 REPIN1Q9BWE0 567 aaKnown RBP3.95□□□□□ -1.78
TRAV41-201ENST00000390468 SALL2Q9Y467 1007 aaPredicted RBP3.95□□□□□ -1.78
TRAV41-201ENST00000390468 EEA1Q15075 1411 aa3.95□□□□□ -1.78
TRAV41-201ENST00000390468 CUL7Q14999 1698 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms