RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 CRBNQ96SW2 442 aa12.69□□□□□ -0.38
PKP4-201ENST00000389757 UNC13AQ9UPW8 1703 aa12.69□□□□□ -0.38
PKP4-201ENST00000389757 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
PKP4-201ENST00000389757 KIF3AQ9Y496 699 aa12.69□□□□□ -0.38
PKP4-201ENST00000389757 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
PKP4-201ENST00000389757 FANCAO15360 1455 aa12.68□□□□□ -0.38
PKP4-201ENST00000389757 NOL8Q76FK4 1167 aaKnown RBP12.68□□□□□ -0.38
PKP4-201ENST00000389757 CCDC34Q96HJ3 373 aa12.68□□□□□ -0.38
PKP4-201ENST00000389757 ST18O60284 1047 aa12.68□□□□□ -0.38
PKP4-201ENST00000389757 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
PKP4-201ENST00000389757 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
PKP4-201ENST00000389757 PTMSP20962 102 aa12.67□□□□□ -0.38
PKP4-201ENST00000389757 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
PKP4-201ENST00000389757 SLKQ9H2G2 1235 aaPredicted RBP12.67□□□□□ -0.38
PKP4-201ENST00000389757 PPP6R1Q9UPN7 881 aa12.67□□□□□ -0.38
PKP4-201ENST00000389757 NAIPQ13075 1403 aa12.67□□□□□ -0.38
PKP4-201ENST00000389757 HSP90AB4PQ58FF6 505 aa12.67□□□□□ -0.38
PKP4-201ENST00000389757 EXOC6Q8TAG9 804 aa12.67□□□□□ -0.38
PKP4-201ENST00000389757 RBM33Q96EV2 1170 aaKnown RBP12.67□□□□□ -0.38
PKP4-201ENST00000389757 RUFY2Q8WXA3 655 aa12.66□□□□□ -0.38
PKP4-201ENST00000389757 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
PKP4-201ENST00000389757 ABCC5O15440 1437 aa12.66□□□□□ -0.38
PKP4-201ENST00000389757 CCDC61Q9Y6R9 512 aa12.66□□□□□ -0.38
PKP4-201ENST00000389757 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
PKP4-201ENST00000389757 SF3B2Q13435 895 aaKnown RBP12.65□□□□□ -0.38
PKP4-201ENST00000389757 CCDC30Q5VVM6 783 aa12.65□□□□□ -0.38
PKP4-201ENST00000389757 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
PKP4-201ENST00000389757 CEBPAP49715 358 aaPredicted RBP12.65□□□□□ -0.38
PKP4-201ENST00000389757 CHMP4CQ96CF2 233 aa12.65□□□□□ -0.38
PKP4-201ENST00000389757 NUDT16Q96DE0 195 aaKnown RBP12.65□□□□□ -0.38
PKP4-201ENST00000389757 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
PKP4-201ENST00000389757 RASSF8Q8NHQ8 419 aa12.65□□□□□ -0.38
PKP4-201ENST00000389757 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
PKP4-201ENST00000389757 RBM19Q9Y4C8 960 aaKnown RBP12.64□□□□□ -0.39
PKP4-201ENST00000389757 BIVM-ERCC5R4GMW8 1640 aa12.64□□□□□ -0.39
PKP4-201ENST00000389757 FBXO31Q5XUX0 539 aaPredicted RBP12.64□□□□□ -0.39
PKP4-201ENST00000389757 ZNF530Q6P9A1 599 aaPredicted RBP12.64□□□□□ -0.39
PKP4-201ENST00000389757 DDX54Q8TDD1 881 aaKnown RBP12.64□□□□□ -0.39
PKP4-201ENST00000389757 DRC7Q8IY82 874 aa12.64□□□□□ -0.39
PKP4-201ENST00000389757 UBTFL1P0CB47 393 aaPredicted RBP12.63□□□□□ -0.39
PKP4-201ENST00000389757 MARCH6O60337 910 aa12.63□□□□□ -0.39
PKP4-201ENST00000389757 CABP4P57796 275 aa12.63□□□□□ -0.39
PKP4-201ENST00000389757 KIF6Q6ZMV9 814 aa12.63□□□□□ -0.39
PKP4-201ENST00000389757 SYNE3Q6ZMZ3 975 aa12.63□□□□□ -0.39
PKP4-201ENST00000389757 PTPN23Q9H3S7 1636 aa12.63□□□□□ -0.39
PKP4-201ENST00000389757 SYAP1Q96A49 352 aaPredicted RBP12.63□□□□□ -0.39
PKP4-201ENST00000389757 APPP05067 770 aa12.62□□□□□ -0.39
PKP4-201ENST00000389757 CSPP1Q1MSJ5 1256 aa12.62□□□□□ -0.39
PKP4-201ENST00000389757 AKAP17AQ02040 695 aaKnown RBP12.62□□□□□ -0.39
PKP4-201ENST00000389757 PNISRQ8TF01 805 aaKnown RBP12.62□□□□□ -0.39
PKP4-201ENST00000389757 IDI1Q13907 227 aa12.62□□□□□ -0.39
PKP4-201ENST00000389757 VPS53Q5VIR6 699 aa12.62□□□□□ -0.39
PKP4-201ENST00000389757 WAPLQ7Z5K2 1190 aa12.62□□□□□ -0.39
PKP4-201ENST00000389757 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
PKP4-201ENST00000389757 MAP3K1Q13233 1512 aa12.61□□□□□ -0.39
PKP4-201ENST00000389757 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
PKP4-201ENST00000389757 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
PKP4-201ENST00000389757 REC8O95072 547 aa12.61□□□□□ -0.39
PKP4-201ENST00000389757 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
PKP4-201ENST00000389757 ZC3H6P61129 1189 aaKnown RBP12.6□□□□□ -0.39
PKP4-201ENST00000389757 NEUROD6Q96NK8 337 aa12.6□□□□□ -0.39
PKP4-201ENST00000389757 CPLX2Q6PUV4 134 aaKnown RBP12.6□□□□□ -0.39
PKP4-201ENST00000389757 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
PKP4-201ENST00000389757 TEX14Q8IWB6 1497 aa12.6□□□□□ -0.39
PKP4-201ENST00000389757 DHX29Q7Z478 1369 aaKnown RBP12.6□□□□□ -0.39
PKP4-201ENST00000389757 ERC2O15083 957 aa12.6□□□□□ -0.39
PKP4-201ENST00000389757 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
PKP4-201ENST00000389757 GNAI3P08754 354 aa12.6□□□□□ -0.39
PKP4-201ENST00000389757 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
PKP4-201ENST00000389757 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
PKP4-201ENST00000389757 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
PKP4-201ENST00000389757 ASXL2Q76L83 1435 aa12.59□□□□□ -0.39
PKP4-201ENST00000389757 RAD21O60216 631 aa12.59□□□□□ -0.39
PKP4-201ENST00000389757 AAMPQ13685 434 aa12.59□□□□□ -0.39
PKP4-201ENST00000389757 TWISTNBQ3B726 338 aaPredicted RBP12.59□□□□□ -0.39
PKP4-201ENST00000389757 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
PKP4-201ENST00000389757 FAM184AQ8NB25 1140 aa12.59□□□□□ -0.39
PKP4-201ENST00000389757 NCOA1Q15788 1441 aa12.59□□□□□ -0.39
PKP4-201ENST00000389757 CTDP1Q9Y5B0 961 aaPredicted RBP12.59□□□□□ -0.39
PKP4-201ENST00000389757 SF3A1Q15459 793 aaKnown RBP12.59□□□□□ -0.39
PKP4-201ENST00000389757 H3BQV1 296 aa12.58□□□□□ -0.4
PKP4-201ENST00000389757 IFFO2Q5TF58 517 aa12.58□□□□□ -0.4
PKP4-201ENST00000389757 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
PKP4-201ENST00000389757 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
PKP4-201ENST00000389757 TRDNQ13061 729 aa12.58□□□□□ -0.4
PKP4-201ENST00000389757 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.4
PKP4-201ENST00000389757 TPM4P67936 248 aa12.58□□□□□ -0.4
PKP4-201ENST00000389757 RNF20Q5VTR2 975 aa12.57□□□□□ -0.4
PKP4-201ENST00000389757 PHF8Q9UPP1 1060 aa12.57□□□□□ -0.4
PKP4-201ENST00000389757 CHAF1AQ13111 956 aaPredicted RBP12.57□□□□□ -0.4
PKP4-201ENST00000389757 PANK1Q8TE04 598 aa12.57□□□□□ -0.4
PKP4-201ENST00000389757 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
PKP4-201ENST00000389757 ANO2Q9NQ90 1003 aa12.55□□□□□ -0.4
PKP4-201ENST00000389757 FAM135AQ9P2D6 1515 aa12.55□□□□□ -0.4
PKP4-201ENST00000389757 PLCH2O75038 1416 aa12.55□□□□□ -0.4
PKP4-201ENST00000389757 TNRQ92752 1358 aa12.55□□□□□ -0.4
PKP4-201ENST00000389757 ADGRF5Q8IZF2 1346 aa12.55□□□□□ -0.4
PKP4-201ENST00000389757 ATP10BO94823 1461 aa12.55□□□□□ -0.4
PKP4-201ENST00000389757 LNPKQ9C0E8 428 aa12.54□□□□□ -0.4
PKP4-201ENST00000389757 DHX16O60231 1041 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms