RNA–Protein interactions for RNA: ENST00000389704.3

EXOSC8-202, Transcript of exosome component 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC8, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-202ENST00000389704 TECPR2O15040 1411 aa24.69■■□□□ 1.54
EXOSC8-202ENST00000389704 SOS2Q07890 1332 aaPredicted RBP24.67■■□□□ 1.54
EXOSC8-202ENST00000389704 ESCO1Q5FWF5 840 aa24.67■■□□□ 1.54
EXOSC8-202ENST00000389704 SIRT1Q96EB6 747 aa24.67■■□□□ 1.54
EXOSC8-202ENST00000389704 NHSL1Q5SYE7 1610 aa24.67■■□□□ 1.54
EXOSC8-202ENST00000389704 PNPLA6Q8IY17 1366 aa24.66■■□□□ 1.54
EXOSC8-202ENST00000389704 IFT172Q9UG01 1749 aa24.64■■□□□ 1.54
EXOSC8-202ENST00000389704 DHX57Q6P158 1386 aaKnown RBP24.64■■□□□ 1.53
EXOSC8-202ENST00000389704 NPHP3Q7Z494 1330 aa24.63■■□□□ 1.53
EXOSC8-202ENST00000389704 YTHDC2Q9H6S0 1430 aaKnown RBP24.63■■□□□ 1.53
EXOSC8-202ENST00000389704 CFAP70Q5T0N1 1121 aa24.63■■□□□ 1.53
EXOSC8-202ENST00000389704 RXRBP28702 533 aa24.62■■□□□ 1.53
EXOSC8-202ENST00000389704 AFF2P51816 1311 aa24.61■■□□□ 1.53
EXOSC8-202ENST00000389704 CDC42BPGQ6DT37 1551 aa24.6■■□□□ 1.53
EXOSC8-202ENST00000389704 MYOM2P54296 1465 aa24.6■■□□□ 1.53
EXOSC8-202ENST00000389704 STAC3Q96MF2 364 aa24.6■■□□□ 1.53
EXOSC8-202ENST00000389704 C8orf37Q96NL8 207 aa24.6■■□□□ 1.53
EXOSC8-202ENST00000389704 NRXN1Q9ULB1 1477 aa24.59■■□□□ 1.53
EXOSC8-202ENST00000389704 PLEKHH1Q9ULM0 1364 aa24.58■■□□□ 1.53
EXOSC8-202ENST00000389704 NUTM2FA1L443 756 aa24.58■■□□□ 1.53
EXOSC8-202ENST00000389704 FOXO3O43524 673 aa24.58■■□□□ 1.53
EXOSC8-202ENST00000389704 NGLY1Q96IV0 654 aa24.57■■□□□ 1.52
EXOSC8-202ENST00000389704 LAMC1P11047 1609 aa24.57■■□□□ 1.52
EXOSC8-202ENST00000389704 ADAMTS2O95450 1211 aa24.56■■□□□ 1.52
EXOSC8-202ENST00000389704 DCAF11Q8TEB1 546 aa24.54■■□□□ 1.52
EXOSC8-202ENST00000389704 QTRT2Q9H974 415 aaKnown RBP24.54■■□□□ 1.52
EXOSC8-202ENST00000389704 PRAM1Q96QH2 718 aa24.53■■□□□ 1.52
EXOSC8-202ENST00000389704 POGKQ9P215 609 aa24.53■■□□□ 1.52
EXOSC8-202ENST00000389704 KDM2AQ9Y2K7 1162 aa24.53■■□□□ 1.52
EXOSC8-202ENST00000389704 KNDC1Q76NI1 1749 aa24.51■■□□□ 1.51
EXOSC8-202ENST00000389704 RBM6P78332 1123 aaKnown RBP24.5■■□□□ 1.51
EXOSC8-202ENST00000389704 XPCQ01831 940 aaPredicted RBP24.5■■□□□ 1.51
EXOSC8-202ENST00000389704 SAFB2Q14151 953 aaKnown RBP eCLIP24.49■■□□□ 1.51
EXOSC8-202ENST00000389704 CDK12Q9NYV4 1490 aaPredicted RBP24.48■■□□□ 1.51
EXOSC8-202ENST00000389704 PXDNQ92626 1479 aa24.46■■□□□ 1.51
EXOSC8-202ENST00000389704 KRT28Q7Z3Y7 464 aa24.46■■□□□ 1.51
EXOSC8-202ENST00000389704 FNBP4Q8N3X1 1017 aaPredicted RBP24.46■■□□□ 1.51
EXOSC8-202ENST00000389704 USP21Q9UK80 565 aa24.46■■□□□ 1.51
EXOSC8-202ENST00000389704 PHF8Q9UPP1 1060 aa24.46■■□□□ 1.51
EXOSC8-202ENST00000389704 TRAK1Q9UPV9 953 aa24.46■■□□□ 1.51
EXOSC8-202ENST00000389704 PSME1Q06323 249 aa24.45■■□□□ 1.5
EXOSC8-202ENST00000389704 SPATA31A3Q5VYP0 1347 aa24.43■■□□□ 1.5
EXOSC8-202ENST00000389704 TRPC5Q9UL62 973 aaPredicted RBP24.43■■□□□ 1.5
EXOSC8-202ENST00000389704 DLC1Q96QB1 1528 aa24.43■■□□□ 1.5
EXOSC8-202ENST00000389704 UPF1Q92900 1129 aaKnown RBP eCLIP24.41■■□□□ 1.5
EXOSC8-202ENST00000389704 FMN2Q9NZ56 1722 aa24.4■■□□□ 1.5
EXOSC8-202ENST00000389704 COL22A1Q8NFW1 1626 aaPredicted RBP24.39■■□□□ 1.5
EXOSC8-202ENST00000389704 ADGRB1O14514 1584 aa24.39■■□□□ 1.5
EXOSC8-202ENST00000389704 ANKARQ7Z5J8 1434 aa24.37■■□□□ 1.49
EXOSC8-202ENST00000389704 HIRIP3Q9BW71 556 aaPredicted RBP24.37■■□□□ 1.49
EXOSC8-202ENST00000389704 EIF3AQ14152 1382 aaKnown RBP24.37■■□□□ 1.49
EXOSC8-202ENST00000389704 KIF1AQ12756 1690 aa24.37■■□□□ 1.49
EXOSC8-202ENST00000389704 MINK1Q8N4C8 1332 aaPredicted RBP24.35■■□□□ 1.49
EXOSC8-202ENST00000389704 HAP1P54257 671 aaPredicted RBP24.35■■□□□ 1.49
EXOSC8-202ENST00000389704 SBNO1A3KN83 1393 aa24.34■■□□□ 1.49
EXOSC8-202ENST00000389704 WASLO00401 505 aaPredicted RBP24.34■■□□□ 1.49
EXOSC8-202ENST00000389704 PMFBP1Q8TBY8 1022 aa24.34■■□□□ 1.49
EXOSC8-202ENST00000389704 LMOD2Q6P5Q4 547 aa24.33■■□□□ 1.49
EXOSC8-202ENST00000389704 RGS12O14924 1447 aa24.33■■□□□ 1.49
EXOSC8-202ENST00000389704 TNS3Q68CZ2 1445 aa24.32■■□□□ 1.48
EXOSC8-202ENST00000389704 ARHGEF10O15013 1369 aa24.31■■□□□ 1.48
EXOSC8-202ENST00000389704 ATRNO75882 1429 aa24.31■■□□□ 1.48
EXOSC8-202ENST00000389704 GPRASP1Q5JY77 1395 aa24.29■■□□□ 1.48
EXOSC8-202ENST00000389704 ADGRB2O60241 1585 aa24.29■■□□□ 1.48
EXOSC8-202ENST00000389704 UNC5CLQ8IV45 518 aa24.29■■□□□ 1.48
EXOSC8-202ENST00000389704 BCL9LQ86UU0 1499 aa24.29■■□□□ 1.48
EXOSC8-202ENST00000389704 GJD4Q96KN9 370 aaPredicted RBP24.28■■□□□ 1.48
EXOSC8-202ENST00000389704 NGDNQ8NEJ9 315 aaKnown RBP24.27■■□□□ 1.48
EXOSC8-202ENST00000389704 CABLES1Q8TDN4 633 aa24.26■■□□□ 1.47
EXOSC8-202ENST00000389704 PRR36Q9H6K5 1346 aa24.26■■□□□ 1.47
EXOSC8-202ENST00000389704 PLEKHG5O94827 1062 aa24.24■■□□□ 1.47
EXOSC8-202ENST00000389704 ATAD2Q6PL18 1390 aa24.24■■□□□ 1.47
EXOSC8-202ENST00000389704 TULP4Q9NRJ4 1543 aa24.23■■□□□ 1.47
EXOSC8-202ENST00000389704 SLIT2O94813 1529 aa24.22■■□□□ 1.47
EXOSC8-202ENST00000389704 NUDT16Q96DE0 195 aaKnown RBP24.22■■□□□ 1.47
EXOSC8-202ENST00000389704 RGPD8O14715 1765 aaPredicted RBP24.21■■□□□ 1.47
EXOSC8-202ENST00000389704 CDK19Q9BWU1 502 aa24.21■■□□□ 1.47
EXOSC8-202ENST00000389704 NBPF1Q3BBV0 1214 aa24.2■■□□□ 1.46
EXOSC8-202ENST00000389704 USP32Q8NFA0 1604 aa24.2■■□□□ 1.46
EXOSC8-202ENST00000389704 PAK3O75914 559 aaPredicted RBP24.18■■□□□ 1.46
EXOSC8-202ENST00000389704 VPS72Q15906 364 aa24.17■■□□□ 1.46
EXOSC8-202ENST00000389704 CCDC61Q9Y6R9 512 aa24.17■■□□□ 1.46
EXOSC8-202ENST00000389704 MARF1Q9Y4F3 1742 aaKnown RBP24.17■■□□□ 1.46
EXOSC8-202ENST00000389704 FAM83GA6ND36 823 aa24.16■■□□□ 1.46
EXOSC8-202ENST00000389704 L3MBTL2Q969R5 705 aa24.15■■□□□ 1.46
EXOSC8-202ENST00000389704 CCDC9Q9Y3X0 531 aaKnown RBP24.15■■□□□ 1.46
EXOSC8-202ENST00000389704 CCDC125Q86Z20 511 aa24.14■■□□□ 1.45
EXOSC8-202ENST00000389704 RALGAPBQ86X10 1494 aa24.13■■□□□ 1.45
EXOSC8-202ENST00000389704 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
EXOSC8-202ENST00000389704 CENPJQ9HC77 1338 aaPredicted RBP24.12■■□□□ 1.45
EXOSC8-202ENST00000389704 ARHGEF28Q8N1W1 1705 aaKnown RBP24.12■■□□□ 1.45
EXOSC8-202ENST00000389704 ATP7BP35670 1465 aa24.12■■□□□ 1.45
EXOSC8-202ENST00000389704 PLEKHG3A1L390 1219 aa24.11■■□□□ 1.45
EXOSC8-202ENST00000389704 SIN3AQ96ST3 1273 aa24.11■■□□□ 1.45
EXOSC8-202ENST00000389704 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
EXOSC8-202ENST00000389704 NBPF8Q3BBV2 869 aa24.1■■□□□ 1.45
EXOSC8-202ENST00000389704 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.1■■□□□ 1.45
EXOSC8-202ENST00000389704 ACEP12821 1306 aa24.1■■□□□ 1.45
EXOSC8-202ENST00000389704 ONECUT3O60422 494 aaPredicted RBP24.09■■□□□ 1.45
EXOSC8-202ENST00000389704 SRPK2P78362 688 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms