RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 DDX19BQ9UMR2 479 aa18.75■□□□□ 0.59
ALK-201ENST00000389048 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
ALK-201ENST00000389048 RNF20Q5VTR2 975 aa18.75■□□□□ 0.59
ALK-201ENST00000389048 EFCAB2Q5VUJ9 269 aa18.74■□□□□ 0.59
ALK-201ENST00000389048 OFD1O75665 1012 aa18.74■□□□□ 0.59
ALK-201ENST00000389048 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
ALK-201ENST00000389048 IKQ13123 557 aaPredicted RBP18.73■□□□□ 0.59
ALK-201ENST00000389048 VPS8Q8N3P4 1428 aa18.73■□□□□ 0.59
ALK-201ENST00000389048 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
ALK-201ENST00000389048 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
ALK-201ENST00000389048 C1orf115Q9H7X2 142 aa18.72■□□□□ 0.59
ALK-201ENST00000389048 DNAJC2Q99543 621 aaKnown RBP18.72■□□□□ 0.59
ALK-201ENST00000389048 PHLDB1Q86UU1 1377 aa18.72■□□□□ 0.59
ALK-201ENST00000389048 TRIM5Q9C035 493 aa18.72■□□□□ 0.59
ALK-201ENST00000389048 SAFBQ15424 915 aaKnown RBP eCLIP18.72■□□□□ 0.59
ALK-201ENST00000389048 LRRFIP1Q32MZ4 808 aaKnown RBP18.71■□□□□ 0.59
ALK-201ENST00000389048 DIAPH1O60610 1272 aaKnown RBP18.71■□□□□ 0.59
ALK-201ENST00000389048 TMEM132AQ24JP5 1023 aa18.71■□□□□ 0.59
ALK-201ENST00000389048 SDF4Q9BRK5 362 aa18.71■□□□□ 0.59
ALK-201ENST00000389048 RIC3Q7Z5B4 369 aa18.71■□□□□ 0.59
ALK-201ENST00000389048 PRKRIP1Q9H875 184 aaPredicted RBP18.71■□□□□ 0.59
ALK-201ENST00000389048 MAP4K4O95819 1239 aaPredicted RBP18.7■□□□□ 0.58
ALK-201ENST00000389048 MEX3CQ5U5Q3 659 aaKnown RBP18.7■□□□□ 0.58
ALK-201ENST00000389048 PODXL2Q9NZ53 605 aa18.7■□□□□ 0.58
ALK-201ENST00000389048 CHMP4CQ96CF2 233 aa18.7■□□□□ 0.58
ALK-201ENST00000389048 CCDC39Q9UFE4 941 aa18.7■□□□□ 0.58
ALK-201ENST00000389048 PRPF40AO75400 957 aaKnown RBP18.7■□□□□ 0.58
ALK-201ENST00000389048 RALYLQ86SE5 291 aaKnown RBP18.7■□□□□ 0.58
ALK-201ENST00000389048 RBM33Q96EV2 1170 aaKnown RBP18.7■□□□□ 0.58
ALK-201ENST00000389048 FAM177A1Q8N128 213 aaPredicted RBP18.69■□□□□ 0.58
ALK-201ENST00000389048 CDR1P51861 262 aa18.69■□□□□ 0.58
ALK-201ENST00000389048 ACBD3Q9H3P7 528 aa18.69■□□□□ 0.58
ALK-201ENST00000389048 STK3Q13188 491 aa18.69■□□□□ 0.58
ALK-201ENST00000389048 TSPYL1Q9H0U9 437 aa18.69■□□□□ 0.58
ALK-201ENST00000389048 AXDND1Q5T1B0 1012 aaPredicted RBP18.69■□□□□ 0.58
ALK-201ENST00000389048 ANKRD62A6NC57 917 aa18.67■□□□□ 0.58
ALK-201ENST00000389048 ZBED9Q6R2W3 1325 aa18.67■□□□□ 0.58
ALK-201ENST00000389048 NUCB2P80303 420 aa18.67■□□□□ 0.58
ALK-201ENST00000389048 RDXP35241 583 aaKnown RBP18.67■□□□□ 0.58
ALK-201ENST00000389048 EVC2Q86UK5 1308 aa18.66■□□□□ 0.58
ALK-201ENST00000389048 PSME1Q06323 249 aa18.66■□□□□ 0.58
ALK-201ENST00000389048 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
ALK-201ENST00000389048 CCDC191Q8NCU4 936 aa18.66■□□□□ 0.58
ALK-201ENST00000389048 FANCIQ9NVI1 1328 aa18.66■□□□□ 0.58
ALK-201ENST00000389048 FAM193AP78312 1265 aa18.66■□□□□ 0.58
ALK-201ENST00000389048 DDX58O95786 925 aaKnown RBP18.65■□□□□ 0.58
ALK-201ENST00000389048 FSD1Q9BTV5 496 aa18.65■□□□□ 0.58
ALK-201ENST00000389048 TRAK2O60296 914 aa18.65■□□□□ 0.58
ALK-201ENST00000389048 PAF1Q8N7H5 531 aa18.65■□□□□ 0.58
ALK-201ENST00000389048 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.58
ALK-201ENST00000389048 USP47Q96K76 1375 aa18.64■□□□□ 0.58
ALK-201ENST00000389048 FIBPO43427 364 aa18.64■□□□□ 0.58
ALK-201ENST00000389048 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.58
ALK-201ENST00000389048 NAT10Q9H0A0 1025 aaKnown RBP18.64■□□□□ 0.57
ALK-201ENST00000389048 CCDC144AA2RUR9 1427 aa18.64■□□□□ 0.57
ALK-201ENST00000389048 TDRD9Q8NDG6 1382 aaKnown RBP18.64■□□□□ 0.57
ALK-201ENST00000389048 NEFHP12036 1026 aa18.64■□□□□ 0.57
ALK-201ENST00000389048 CENPHQ9H3R5 247 aa18.63■□□□□ 0.57
ALK-201ENST00000389048 TSPY26PQ9H489 355 aa18.63■□□□□ 0.57
ALK-201ENST00000389048 CCDC173Q0VFZ6 552 aa18.63■□□□□ 0.57
ALK-201ENST00000389048 CARMIL2Q6F5E8 1435 aa18.63■□□□□ 0.57
ALK-201ENST00000389048 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
ALK-201ENST00000389048 BRMS1Q9HCU9 246 aa18.63■□□□□ 0.57
ALK-201ENST00000389048 ERC2O15083 957 aa18.62■□□□□ 0.57
ALK-201ENST00000389048 ATP2B2Q01814 1243 aa18.61■□□□□ 0.57
ALK-201ENST00000389048 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
ALK-201ENST00000389048 CDC45O75419 566 aa18.61■□□□□ 0.57
ALK-201ENST00000389048 ZHX3Q9H4I2 956 aa18.6■□□□□ 0.57
ALK-201ENST00000389048 UBTFL1P0CB47 393 aaPredicted RBP18.6■□□□□ 0.57
ALK-201ENST00000389048 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
ALK-201ENST00000389048 CDK5RAP3Q96JB5 506 aa18.59■□□□□ 0.57
ALK-201ENST00000389048 CWC15Q9P013 229 aaKnown RBP18.59■□□□□ 0.57
ALK-201ENST00000389048 ERICH4A6NGS2 130 aa18.59■□□□□ 0.57
ALK-201ENST00000389048 MRE11P49959 708 aa18.59■□□□□ 0.57
ALK-201ENST00000389048 NEK4P51957 841 aa18.59■□□□□ 0.57
ALK-201ENST00000389048 MAGEC2Q9UBF1 373 aaPredicted RBP18.59■□□□□ 0.57
ALK-201ENST00000389048 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.59■□□□□ 0.57
ALK-201ENST00000389048 IBSPP21815 317 aaPredicted RBP18.59■□□□□ 0.57
ALK-201ENST00000389048 RUNDC1Q96C34 613 aa18.59■□□□□ 0.57
ALK-201ENST00000389048 KRT18P05783 430 aaKnown RBP18.58■□□□□ 0.57
ALK-201ENST00000389048 ENOX2Q16206 610 aaKnown RBP18.58■□□□□ 0.57
ALK-201ENST00000389048 CNTROBQ8N137 903 aa18.58■□□□□ 0.57
ALK-201ENST00000389048 CABP2Q9NPB3 220 aa18.58■□□□□ 0.56
ALK-201ENST00000389048 LEKR1Q6ZMV7 388 aa18.58■□□□□ 0.56
ALK-201ENST00000389048 CT47B1P0C2W7 299 aaPredicted RBP18.57■□□□□ 0.56
ALK-201ENST00000389048 TAX1BP1Q86VP1 789 aa18.57■□□□□ 0.56
ALK-201ENST00000389048 CDCA7LQ96GN5 454 aa18.57■□□□□ 0.56
ALK-201ENST00000389048 ROCK1Q13464 1354 aa18.57■□□□□ 0.56
ALK-201ENST00000389048 SERPINC1P01008 464 aa18.57■□□□□ 0.56
ALK-201ENST00000389048 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
ALK-201ENST00000389048 KINO60870 393 aaKnown RBP18.56■□□□□ 0.56
ALK-201ENST00000389048 PIBF1Q8WXW3 757 aa18.56■□□□□ 0.56
ALK-201ENST00000389048 SIL1Q9H173 461 aa18.56■□□□□ 0.56
ALK-201ENST00000389048 NINLQ9Y2I6 1382 aa18.56■□□□□ 0.56
ALK-201ENST00000389048 PRKCSHP14314 528 aaPredicted RBP18.55■□□□□ 0.56
ALK-201ENST00000389048 TANGO6Q9C0B7 1094 aa18.55■□□□□ 0.56
ALK-201ENST00000389048 SURF6O75683 361 aaKnown RBP18.55■□□□□ 0.56
ALK-201ENST00000389048 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
ALK-201ENST00000389048 SPINK5Q9NQ38 1064 aaPredicted RBP18.55■□□□□ 0.56
ALK-201ENST00000389048 PPP1R1BQ9UD71 204 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms