RNA–Protein interactions for RNA: ENST00000382998.8

CTIF-202, Transcript of cap binding complex dependent translation initiation factor, humanhuman

TSL 1 (best) BASIC

Gene CTIF, Length 4,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTIF-202ENST00000382998 TERF2IPQ9NYB0 399 aa16.8■□□□□ 0.28
CTIF-202ENST00000382998 PIK3R5Q8WYR1 880 aa16.8■□□□□ 0.28
CTIF-202ENST00000382998 CUL7Q14999 1698 aa16.8■□□□□ 0.28
CTIF-202ENST00000382998 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
CTIF-202ENST00000382998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.79■□□□□ 0.28
CTIF-202ENST00000382998 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
CTIF-202ENST00000382998 IGSF3O75054 1194 aa16.78■□□□□ 0.28
CTIF-202ENST00000382998 PDCL2Q8N4E4 241 aa16.78■□□□□ 0.28
CTIF-202ENST00000382998 CCDC94Q9BW85 323 aaPredicted RBP16.78■□□□□ 0.28
CTIF-202ENST00000382998 ST20-MTHFSA0A0A6YYL1 179 aa16.78■□□□□ 0.28
CTIF-202ENST00000382998 TMX4Q9H1E5 349 aaPredicted RBP16.77■□□□□ 0.28
CTIF-202ENST00000382998 NBPF1Q3BBV0 1214 aa16.77■□□□□ 0.28
CTIF-202ENST00000382998 C9orf84Q5VXU9 1444 aa16.77■□□□□ 0.27
CTIF-202ENST00000382998 DYNC1I1O14576 645 aa16.77■□□□□ 0.27
CTIF-202ENST00000382998 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.27
CTIF-202ENST00000382998 RDXP35241 583 aaKnown RBP16.76■□□□□ 0.27
CTIF-202ENST00000382998 ANKLE2Q86XL3 938 aa16.76■□□□□ 0.27
CTIF-202ENST00000382998 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
CTIF-202ENST00000382998 UTP14CQ5TAP6 766 aaKnown RBP16.76■□□□□ 0.27
CTIF-202ENST00000382998 EIF3AQ14152 1382 aaKnown RBP16.76■□□□□ 0.27
CTIF-202ENST00000382998 PSME1Q06323 249 aa16.76■□□□□ 0.27
CTIF-202ENST00000382998 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
CTIF-202ENST00000382998 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
CTIF-202ENST00000382998 PCF11O94913 1555 aaKnown RBP16.75■□□□□ 0.27
CTIF-202ENST00000382998 ASXL2Q76L83 1435 aa16.75■□□□□ 0.27
CTIF-202ENST00000382998 AMPHP49418 695 aa16.75■□□□□ 0.27
CTIF-202ENST00000382998 GIMAP7Q8NHV1 300 aa16.75■□□□□ 0.27
CTIF-202ENST00000382998 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
CTIF-202ENST00000382998 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
CTIF-202ENST00000382998 DMTNQ08495 405 aa16.74■□□□□ 0.27
CTIF-202ENST00000382998 ZSCAN30Q86W11 494 aa16.74■□□□□ 0.27
CTIF-202ENST00000382998 MNS1Q8NEH6 495 aa16.74■□□□□ 0.27
CTIF-202ENST00000382998 WDR62O43379 1518 aa16.74■□□□□ 0.27
CTIF-202ENST00000382998 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
CTIF-202ENST00000382998 HFM1A2PYH4 1435 aa16.73■□□□□ 0.27
CTIF-202ENST00000382998 DIAPH3Q9NSV4 1193 aa16.73■□□□□ 0.27
CTIF-202ENST00000382998 CWC22Q9HCG8 908 aaKnown RBP16.73■□□□□ 0.27
CTIF-202ENST00000382998 SPDYE4A6NLX3 237 aa16.72■□□□□ 0.27
CTIF-202ENST00000382998 NAP1L1P55209 391 aaKnown RBP16.72■□□□□ 0.27
CTIF-202ENST00000382998 PIP4K2BP78356 416 aa16.72■□□□□ 0.27
CTIF-202ENST00000382998 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
CTIF-202ENST00000382998 HSCBQ8IWL3 235 aa16.72■□□□□ 0.27
CTIF-202ENST00000382998 TMCO5BA8MYB1 307 aa16.71■□□□□ 0.27
CTIF-202ENST00000382998 SUDS3Q9H7L9 328 aaPredicted RBP16.71■□□□□ 0.27
CTIF-202ENST00000382998 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.27
CTIF-202ENST00000382998 ZBTB9Q96C00 473 aa16.71■□□□□ 0.27
CTIF-202ENST00000382998 FBXO31Q5XUX0 539 aaPredicted RBP16.71■□□□□ 0.27
CTIF-202ENST00000382998 EVA1CP58658 441 aa16.71■□□□□ 0.26
CTIF-202ENST00000382998 CFAP70Q5T0N1 1121 aa16.71■□□□□ 0.26
CTIF-202ENST00000382998 USP47Q96K76 1375 aa16.7■□□□□ 0.26
CTIF-202ENST00000382998 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
CTIF-202ENST00000382998 U2AF1L5P0DN76 240 aaPredicted RBP16.7■□□□□ 0.26
CTIF-202ENST00000382998 U2AF1Q01081 240 aaKnown RBP eCLIP16.7■□□□□ 0.26
CTIF-202ENST00000382998 LRCH2Q5VUJ6 765 aa16.7■□□□□ 0.26
CTIF-202ENST00000382998 TMED8Q6PL24 325 aaPredicted RBP16.7■□□□□ 0.26
CTIF-202ENST00000382998 CCDC173Q0VFZ6 552 aa16.69■□□□□ 0.26
CTIF-202ENST00000382998 TMEM132AQ24JP5 1023 aa16.69■□□□□ 0.26
CTIF-202ENST00000382998 CT47A1Q5JQC4 288 aaPredicted RBP16.69■□□□□ 0.26
CTIF-202ENST00000382998 SLC52A1Q9NWF4 448 aa16.69■□□□□ 0.26
CTIF-202ENST00000382998 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
CTIF-202ENST00000382998 USP8P40818 1118 aa16.69■□□□□ 0.26
CTIF-202ENST00000382998 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
CTIF-202ENST00000382998 GRPEL1Q9HAV7 217 aa16.69■□□□□ 0.26
CTIF-202ENST00000382998 NAIPQ13075 1403 aa16.69■□□□□ 0.26
CTIF-202ENST00000382998 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
CTIF-202ENST00000382998 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
CTIF-202ENST00000382998 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
CTIF-202ENST00000382998 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
CTIF-202ENST00000382998 NUTM2GQ5VZR2 741 aa16.68■□□□□ 0.26
CTIF-202ENST00000382998 EHBP1L1Q8N3D4 1523 aa16.68■□□□□ 0.26
CTIF-202ENST00000382998 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
CTIF-202ENST00000382998 FANCAO15360 1455 aa16.67■□□□□ 0.26
CTIF-202ENST00000382998 SASS6Q6UVJ0 657 aa16.67■□□□□ 0.26
CTIF-202ENST00000382998 MPNDQ8N594 471 aa16.67■□□□□ 0.26
CTIF-202ENST00000382998 RTF1Q92541 710 aaKnown RBP16.67■□□□□ 0.26
CTIF-202ENST00000382998 CCDC97Q96F63 343 aaPredicted RBP16.66■□□□□ 0.26
CTIF-202ENST00000382998 MIA2Q96PC5 1412 aa16.66■□□□□ 0.26
CTIF-202ENST00000382998 TMX1Q9H3N1 280 aa16.65■□□□□ 0.26
CTIF-202ENST00000382998 SETSIPP0DME0 302 aa16.65■□□□□ 0.26
CTIF-202ENST00000382998 MS4A1P11836 297 aa16.65■□□□□ 0.26
CTIF-202ENST00000382998 ESCO1Q5FWF5 840 aa16.65■□□□□ 0.26
CTIF-202ENST00000382998 SKOR2Q2VWA4 1001 aaPredicted RBP16.65■□□□□ 0.26
CTIF-202ENST00000382998 ARMCX6Q7L4S7 300 aa16.65■□□□□ 0.26
CTIF-202ENST00000382998 CCDC91Q7Z6B0 441 aa16.64■□□□□ 0.25
CTIF-202ENST00000382998 DRC7Q8IY82 874 aa16.64■□□□□ 0.25
CTIF-202ENST00000382998 RBM33Q96EV2 1170 aaKnown RBP16.64■□□□□ 0.25
CTIF-202ENST00000382998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.259e-7■■□□□ 13.7
CTIF-202ENST00000382998 CPSF2Q9P2I0 782 aaKnown RBP16.64■□□□□ 0.25
CTIF-202ENST00000382998 ISY1Q9ULR0 285 aaKnown RBP16.64■□□□□ 0.25
CTIF-202ENST00000382998 ATP10BO94823 1461 aa16.64■□□□□ 0.25
CTIF-202ENST00000382998 MAP3K1Q13233 1512 aa16.63■□□□□ 0.25
CTIF-202ENST00000382998 CCP110O43303 1012 aa16.63■□□□□ 0.25
CTIF-202ENST00000382998 LIG1P18858 919 aa16.63■□□□□ 0.25
CTIF-202ENST00000382998 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
CTIF-202ENST00000382998 AKNAQ7Z591 1439 aa16.63■□□□□ 0.25
CTIF-202ENST00000382998 FAM43BQ6ZT52 329 aaPredicted RBP16.62■□□□□ 0.25
CTIF-202ENST00000382998 CHMP4CQ96CF2 233 aa16.62■□□□□ 0.25
CTIF-202ENST00000382998 TRAK2O60296 914 aa16.62■□□□□ 0.25
CTIF-202ENST00000382998 RASSF4Q9H2L5 321 aa16.62■□□□□ 0.25
CTIF-202ENST00000382998 PMFBP1Q8TBY8 1022 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms